Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3673 ATGCCACGAGCAAGTGACCTTCTTCTTGGAGTCTCAATATTTGGTGAGCCAATCAAGACTAAAATCATTGATCGTGCAAATTCAGCTATGGAAGAATTGTGCAGGCTAGGGATTGCTGCTGGAGAACCTATATGGCATAAACATAAAGATAGATACGAAATTCTTGATGATGCCGAATATTTGAAAGCATTTGGTCGGGTTGATTCAACGTTAATGGATATCATTAGGTTGGCTGAGGTTGGAGAGCTGCAAGCTTTACCTAGTTTTGATTCGTGCCGAAACATGAATCCAATTTCGACAAATCAATGTTCCGGACAAGGTTTGCAGATCGAAGCTACACGCGATATGGAACTGATTAGCACCAGTCCAGTTAGTGTTGCTGAATTACTTATGGATGTGAATCAATGGTCGATGACATTTCACAACATTGTCTCAAGAGCAACGGTTCTAGGAAGCTTTTCAGATGGAGTGGAAGGAACCTATGATGGAAAATTGCATGTGATGACTGCAGAATTTCATTTACCTAGTCCTGTTATACCTACTAGGGAGTGTTGTTTTGCAAGGTACTGCAAGAAATTCCCTTATAACAGATGGGCTGTTGTTGATGTATCGTTGGAAGACTTCTTTCCTTGTGCAACAAGCAATCTTCGAAAAAGACCTTCAGGCTGTGTCATTTTGCCAGCGGATAAAGGAGGCACCCAGGTTATATGGGTGGAGCATGTGGAAGCAGATCATAGTCAATTGAATGATCTTTTCAAGCCATTAGTTACCTCTGGTTTGGCTTTTGGTGCCGCACGCTGGATTGCTTCTATTGTCCGGCACTTTGAGTGGTCAGATGTACTGACGGCTACAACTCTTGCTGCAGATGCTGGAGTTATTATACCTCAAACTGGAAGGACAAGTTTCTTGAAGTTGGCAGATAGAATGATGAGAAAATTTTGTGCTAATCTTAGTGCTACAACTAGCAATCCATGGATGAGATTGGTTCCTTCTCATAATTCAATGGATGTTAGAGTTATGATTGATAATAATAGGAATGGTGGTACAAATAATCCTCTTGGAACATCAGTGGTTTTTAGTACTACTATTTGGTTTCGTGTCTCTCCAAATCGATTATTCAACTTCCTTCGTCATGAGAAATCCAGAAACGAGTGGGATATACTTTCAAAAACACTTTTTATTCAAGAATTTGCCTGCTTGGTGACCAGCAAACATCCAGAGACTCGTGTTTCTTTGCTGCGAGCAAGTAATTCTAAGGACAAGACAGAAATATTTTACCTGCAAGAGAGTTATGCAGACTCATCAGCTTCCTACGTGATTTACGCGCCACTAGACGAATCAGCACTGGCTTATCTTGCAAAAGGATCAAATCCAGATAAGGTAATTGCATATCCATCAGGATTTGCAATTATTCCAGGAGGGTTACACAGAAATGGTGATCAAAGCAATGGCAATGAAAGTCTTCTAACTATTTCATTTCATCTACTTGATAAAGCCATCACCAATGATGGAGCTATTCCTCCTGAATCAGTTCAAACAATTTATGGGATCCTTACAGACACTGTTACTGCTATAAAGGATGCTTTGACGTATCATACTCGACACAACAATTGGGCGCAAGATGAATTGAAAAATGGCTCGACAAACAAAAACTTTAGTATGTAG 1665 0.403 MPRASDLLLGVSIFGEPIKTKIIDRANSAMEELCRLGIAAGEPIWHKHKDRYEILDDAEYLKAFGRVDSTLMDIIRLAEVGELQALPSFDSCRNMNPISTNQCSGQGLQIEATRDMELISTSPVSVAELLMDVNQWSMTFHNIVSRATVLGSFSDGVEGTYDGKLHVMTAEFHLPSPVIPTRECCFARYCKKFPYNRWAVVDVSLEDFFPCATSNLRKRPSGCVILPADKGGTQVIWVEHVEADHSQLNDLFKPLVTSGLAFGAARWIASIVRHFEWSDVLTATTLAADAGVIIPQTGRTSFLKLADRMMRKFCANLSATTSNPWMRLVPSHNSMDVRVMIDNNRNGGTNNPLGTSVVFSTTIWFRVSPNRLFNFLRHEKSRNEWDILSKTLFIQEFACLVTSKHPETRVSLLRASNSKDKTEIFYLQESYADSSASYVIYAPLDESALAYLAKGSNPDKVIAYPSGFAIIPGGLHRNGDQSNGNESLLTISFHLLDKAITNDGAIPPESVQTIYGILTDTVTAIKDALTYHTRHNNWAQDELKNGSTNKNFSM* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3673 554 Pfam START domain 95 272 IPR002913 GO:0008289
Tpr7g3673 554 ProSiteProfiles START domain profile. 42 276 IPR002913 GO:0008289
Tpr7g3673 554 SUPERFAMILY Bet v1-like 298 473 - -
Tpr7g3673 554 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 3 533 IPR042160 -
Tpr7g3673 554 CDD START_ArGLABRA2_like 19 276 - -
Tpr7g3673 554 Gene3D - 102 264 IPR023393 -
Tpr7g3673 554 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN ROC2 3 533 - -
Tpr7g3673 554 SUPERFAMILY Bet v1-like 118 276 - -
Tpr7g3673 554 SMART START_1 62 277 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3673 Tpr-Chr7 45493154 45497883 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3673 6 530 Homeobox Transcription Factor Family AT4G04890 38.961 8.17e-114 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3673 K09338 - jre:108992281 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3673 7 45493154 45497883 Tpr7g3673 7 45493154 45497883 ECH