LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr7g3668	ATGAAATTGTTTAAGGAAGTAAAAACTTCCTCGTACCAAACATTTCTCTTATTATTATTATTGTTGTTTATCTTGTCCGGTTTTGAAATTTGTCACGGACAAGCTGATGATGACTATGCGGCGCCTCCACCACCACCAGCTGAACTCGAAAACTGCGACGGAATATTTCTAACCTACAGTTTAACCTCAAGGGAAAAAGAATATCCGCACGTAAAAAATGTGACGGCACAGGCGTGGGCGTTTAAATCGGAAGCTACATTGATGAATGTTGGGGACGAGGAATTGAAAGGTTGGAAAATGTTTATTGGGTTTCAGCATAGGGAGATTCTTGTTTCGGCCGACGGGGCTGTTCTGGTTGACTCAGATGATTTTCCGGCTGAGGTAGGAAATGGGACTACACTTGCTGGGAGTGCTGCGACGGATTTGAGGACCGCCATTGAAACGGCTGGTGATTATACTCAAATGACTGTTAGGGTTCAGATGAGTGGAACTCAGTTTGGACTTGGTGCTGGTGGTAAACCTATGCCTAAAACTATTAAGCTTGTTAATGATGGCTTCAAATGTCCCGCAGCTAGTCGTCAAGGTCAAAGAATGTTTGTATGCTGCAAAAAGGACCCAAAATTCAAAGCCAAACTTGACAAGAAAACAAAGTTCCTTCCTCGTCGCTATGGCGACCTAACCATAGCATATGACGTACTTCAATCCTTCAAAACCAGCTACTATGTACAAATAACCATGGATAACAATCATCCATTAGGTCGTCTTGATCATTGGAACATAACATGGGAATGGCAAAAAGGCGAGTTCATTAACACATTAAAAGGTGCTTACGCTCGCATAAAAGACCCTTCTGAATGTTTATATGGTCCTGCTGGAAGATACTATGGTGACTTAGATTTCTCACAAGTTGCAAACTGTCAAAAAAAGCCTATTCTCTCTGATCTTCCTTCTGAAAGAAAAGAAGATGAAAAAGTTGGTAAATTACCTTGGTGTTGTAGGAATGGTACTGTTTTACCACCTATTATGGATAAGAACAAAGCAAGATCAATTTTTCAGATGCAAGTTTTTAAAATCCCACCTGATGATAACAGAACAGCACTTACACCACCAATGAAATGGCACATTGATGGTGTTATTAACCCTAAATACACATGTGGACCACCAATTAGAGTTGATCCACAACAGTTTCCTGATCCAAGTGGACTTAAAGCAATCTCAACAGCTTTTGCCAGTTGGCAAATAGTTTGCAATATGACAAAACCGAAGCCGAAAGAAAACCGTTGTTGTGTTTCGTTTTCGGCTTTCTATAATGAATCTGCTATCCCTTGCAACACATGTGCATGTGGTTGTGATGATACAAGAAAGTGTAATGCCAATGCTCAACCTTTACTTCTTCCACCTGATGCACTTCTTGTCCCATTTGTGAATAGAACATTAAAGGCGCGCGCATGGGCGAAACTCAAACACATGCATGTTCCGAATAAGTTACCTTGTGGAGATAATTGTCCTGTGAGTATTAACTGGCATGTTAGTTCTGATCATAAGGAAGGATGGACGGCTAGGATGACAATTTTCAATTGGGAAGATTTCTCTTTTGATGATTGGTTCGCTGCAATTAAGTTTGATAGGCATTTTGAAGATTTTCAAGATGTTTACTCGTTTAATGGAACGAGAATCCCCGGTATCAAAACCATTTTCTTTCAAGGACTTAAATATTTGAATTACTTAGCAGGAGAGACTAACGGAACTCATATTGGCGATCCAAGGGTGCCAGGGAAACAACAGTCTGTGATTTCTTTTCATAAGAAACACGCGAAAGATTTCAATGTTGTGCGCGACGCTTTTCCTTCTAAGGTTTACTTCAATGGAATGGAATGTGCACTTCCTCCACATAGACCTGCTAAAAGTTTAGGGCATAAATCTTCTATCAGTGTCATTACAGTCATTTTCACAGCTTTTATGACATTCTTGCTCATGACAGATCGCTTTTTCTAA	1995	0.402	MKLFKEVKTSSYQTFLLLLLLLFILSGFEICHGQADDDYAAPPPPPAELENCDGIFLTYSLTSREKEYPHVKNVTAQAWAFKSEATLMNVGDEELKGWKMFIGFQHREILVSADGAVLVDSDDFPAEVGNGTTLAGSAATDLRTAIETAGDYTQMTVRVQMSGTQFGLGAGGKPMPKTIKLVNDGFKCPAASRQGQRMFVCCKKDPKFKAKLDKKTKFLPRRYGDLTIAYDVLQSFKTSYYVQITMDNNHPLGRLDHWNITWEWQKGEFINTLKGAYARIKDPSECLYGPAGRYYGDLDFSQVANCQKKPILSDLPSERKEDEKVGKLPWCCRNGTVLPPIMDKNKARSIFQMQVFKIPPDDNRTALTPPMKWHIDGVINPKYTCGPPIRVDPQQFPDPSGLKAISTAFASWQIVCNMTKPKPKENRCCVSFSAFYNESAIPCNTCACGCDDTRKCNANAQPLLLPPDALLVPFVNRTLKARAWAKLKHMHVPNKLPCGDNCPVSINWHVSSDHKEGWTARMTIFNWEDFSFDDWFAAIKFDRHFEDFQDVYSFNGTRIPGIKTIFFQGLKYLNYLAGETNGTHIGDPRVPGKQQSVISFHKKHAKDFNVVRDAFPSKVYFNGMECALPPHRPAKSLGHKSSISVITVIFTAFMTFLLMTDRFF*	665

Showing 1 to 1 of 1 entries

Previous1Next

Annotation information

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Tpr7g3668	664	PANTHER	COBRA-LIKE PROTEIN 10	14	663	-	-
Tpr7g3668	664	Pfam	COBRA-like protein	240	419	IPR006918	GO:0010215\|GO:0031225
Tpr7g3668	664	PANTHER	COBRA-LIKE PROTEIN 7	14	663	-	-

Showing 1 to 3 of 3 entries

Previous1Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr7g3668	Tpr-Chr7	45453065	45456600	Dispersed/Transposed

Showing 1 to 1 of 1 entries

Previous1Next

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr7g3668	11	661	COBRA Gene Family	AT3G20580	61.644	0.0	835

Showing 1 to 1 of 1 entries

Previous1Next

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr7g3668	-		-	gmx:100789175	1048.11

Showing 1 to 1 of 1 entries

Previous1Next

Event-related genes

Show entries

Search:

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tpr7g3668	7	45453065	45456600	Tpr7g3668	7	45453065	45456600	ECH

Showing 1 to 1 of 1 entries

Previous1Next