Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3651 ATGGTTTCCCCGGAAAACACCAATTGGCTTTTCGATTACACTTTGATTGACGAAATTCCCGTCGATGGCTCCTTCGCCTTCACGTGGCCCCCACCACATCCTTCCAATGTTGGTGTTGAAATGGATGGCTCTTTGGGGGATTCTGATGGTATCAAAGAACCTGGTTCGAAGAAGAGGGGTAGATCGGATTCATGTGCTCCTTCCAGCTCTAAGGCATGTCGAGAGAAGCTGCGGAGGGATAAGCTGAATGACAAGTTTGTTGAATTAGGCTCCTTCTTGGAGCCTGGAAGGCCTCCCAAAACTGACAAGGCAGCAATTCTGATCGATGCTGCCCGCATGGTGAAACAGTTGCGGGGTGAAGCCCAGAAGTTGAAAGACTCAAATTCAAATATTCAAGAGAAGATTAAAGAGTTGAAGGTTGAGAAAAATGAACTCCGTGATGAAAAGCAGAGGCTTAAGGCTGAGAAAGAGAAGTTGGAGCAGCTAATGAAATCAATGAATGCCCAACCCAGTTTCTTGACACACCCTCCTCCAATCCCTGCTGCATTTGCTCCACAAGGCCAAGTCCCTGGAAACAAGTTAATGCCTTTCATGAGTTATCCAGGAGTTGCCATGTGGCAATTCATGCCACCAGCCTCCGTGGATACCTCACAGGATCATGTACTCCGTCCACCAGTCGCCTAA 684 0.4795 MVSPENTNWLFDYTLIDEIPVDGSFAFTWPPPHPSNVGVEMDGSLGDSDGIKEPGSKKRGRSDSCAPSSSKACREKLRRDKLNDKFVELGSFLEPGRPPKTDKAAILIDAARMVKQLRGEAQKLKDSNSNIQEKIKELKVEKNELRDEKQRLKAEKEKLEQLMKSMNAQPSFLTHPPPIPAAFAPQGQVPGNKLMPFMSYPGVAMWQFMPPASVDTSQDHVLRPPVA* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3651 227 Gene3D - 69 145 IPR036638 GO:0046983
Tpr7g3651 227 Pfam Helix-loop-helix DNA-binding domain 70 117 IPR011598 GO:0046983
Tpr7g3651 227 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 69 135 IPR036638 GO:0046983
Tpr7g3651 227 PANTHER BHLH TRANSCRIPTION FACTOR 1 227 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Tpr7g3651 227 CDD bHLH_AtILR3_like 71 146 - -
Tpr7g3651 227 Coils Coil 107 169 - -
Tpr7g3651 227 MobiDBLite consensus disorder prediction 36 77 - -
Tpr7g3651 227 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 66 117 IPR011598 GO:0046983
Tpr7g3651 227 PANTHER BHLH DOMAIN CLASS TRANSCRIPTION FACTOR 1 227 - -
Tpr7g3651 227 SMART finulus 72 123 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3651 Tpr-Chr7 45307872 45310303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3651 1 227 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 69.328 4.07e-111 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Tpr7g3651 HLH 1.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3651 - - ccaj:109815088 382.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3651 7 45307872 45310303 Tpr7g3651 7 45307872 45310303 ECH