Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3632 ATGGCTGATGATGATCAATTTCATAATTCAAGTGGAAATTGGTGGGACACAGCATCAAGAAATATCAGATTTGATCATCAAAGTGGAGGAACATCACAATCTTCTAATTCCTCAGCCATCACCAACAATAACAACATAGTTGATTTTGGTTGGCAAAATTCAGATATGGTAGAGATAAAACCAAGATCTTCTATGGAAAATTCTTTTCATGATACTCAAAAACTTCAACAAAATCAAGACTCTTCAACTTCTTCTGATCCCAACTTGCATATGATGGGTTTAGGCCTTTCTTCTCATTCCATGGATTGGAATCAACCTTCTTTGATAGGTGAGAAGGGAGCTGATAATAGTTTCAGCACAATGTTACAAGAGAATTTGAGTTCAACAAGGAACAATTTTGAGCAAGAAAATGTGATGGGGATTTGTCAACAAGTGAATAGAAGTAATTTCTCTTTGGATCAAAACCAATTTAGTCCTCAATATAGTTCTGGAGATAGCAATGTTATTACAAGCCAATGTTTACCAACAAATTTTCAAATGGATTCTTCAACTTTATATGGAACTCCTCCACCAATTTTACAAGGTTCATTTGAGAATAGATCCATGAGTAGTTTTCCATATCCAACAAATAACTATGGATTAAATTCTAATAATGAGTTGAATATGAATATGCCTTCTAATGATTGGTCTAATAAAGTTCCTCAATTTTTGATGAGAACTTCACCTCCAAAACAACCTACCAATAACCAATTGCATTTTACTAACAACACCCCCTTTTGGAATGCTTCTCATGAGGGTGCTAATTCCATCAAAGATGTTAGGTCAAGTTTCTTCCCTTCTTTGCAACCTCAATTCTCCACCCCAAATTTTGATCAACACTCAAAGAATATATCTGAGGTAAATACTGTGGTGAAGAAAAGTGGAAGTGAGCCAGCACCCAAAAGGACCCGTAACGAAACCCCATCAACTTTGCCAGCTTTTAAGGTGAGAAAAGAGAAGATGGGAGACAGAATCACTGCACTCCAACAATTAGTGTCTCCTTTTGGAAAGACTGATACAGCCTCGGTGCTTTCTGAAGCCATTGAATACATCAAATTCCTCCATGAACAGGTTACAGTTTTGAGCACACCATATATGAAAAGTGGAGCTCCAATAGAGATTCATCAGAATTCAAGCAAATCAAAAAAATCCGAGAGTGCAAAGCAAGATCTTAAAAGTCGAGGACTATGTTTGGTACCGGTTTCTAGCACATTTCCGGTGACTCATGAAACAACTGTCGATTTTTGGACACCAACATTCGGAGGAACATCAAGATAA 1317 0.3683 MADDDQFHNSSGNWWDTASRNIRFDHQSGGTSQSSNSSAITNNNNIVDFGWQNSDMVEIKPRSSMENSFHDTQKLQQNQDSSTSSDPNLHMMGLGLSSHSMDWNQPSLIGEKGADNSFSTMLQENLSSTRNNFEQENVMGICQQVNRSNFSLDQNQFSPQYSSGDSNVITSQCLPTNFQMDSSTLYGTPPPILQGSFENRSMSSFPYPTNNYGLNSNNELNMNMPSNDWSNKVPQFLMRTSPPKQPTNNQLHFTNNTPFWNASHEGANSIKDVRSSFFPSLQPQFSTPNFDQHSKNISEVNTVVKKSGSEPAPKRTRNETPSTLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKSGAPIEIHQNSSKSKKSESAKQDLKSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTSR* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3632 438 MobiDBLite consensus disorder prediction 63 86 - -
Tpr7g3632 438 CDD bHLH_AtbHLH_like 324 375 IPR045239 -
Tpr7g3632 438 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 328 382 IPR036638 GO:0046983
Tpr7g3632 438 PANTHER TRANSCRIPTION FACTOR BHLH123-LIKE ISOFORM X1 36 146 - -
Tpr7g3632 438 PANTHER TRANSCRIPTION FACTOR BHLH123-LIKE ISOFORM X1 143 427 - -
Tpr7g3632 438 Gene3D - 328 383 IPR036638 GO:0046983
Tpr7g3632 438 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 143 427 - -
Tpr7g3632 438 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 36 146 - -
Tpr7g3632 438 SMART finulus 329 373 IPR011598 GO:0046983
Tpr7g3632 438 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 318 367 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3632 Tpr-Chr7 45044357 45048965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3632 110 438 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 43.603 2.84e-67 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3632 - - gmx:100796549 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3632 7 45044357 45048965 Tpr7g3632 7 45044357 45048965 ECH