Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3629 ATGAGACAAGCAGGTGCATATTCAAATTTACTATGTGGAGGAATATCAGGAAGAACAGGTCCACATTCATTACCATTAGCAAGAATAAAGAAGATAATGAAGAATTCTAGTGAAGATGTGAAGATGATATCAGGTGTAGCACCAATTGTTTTCTCAAAAGCTTGTGAAATTTTCATTGAAGAACTTACAAGAAGGTCTTGGATTATGGCTATTGATGGTAAAAGAAGAACTTTGAATAAAGAAGATATTGCTTCTGCTGTTATAGCTACTGATATATTTGATTTTTTGATTACTTTGGTTTCTAATTCTGATGCAACTGATGATGCTACTGTTATCCAAATGGAAACTATATGA 354 0.3249 MRQAGAYSNLLCGGISGRTGPHSLPLARIKKIMKNSSEDVKMISGVAPIVFSKACEIFIEELTRRSWIMAIDGKRRTLNKEDIASAVIATDIFDFLITLVSNSDATDDATVIQMETI* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3629 117 SUPERFAMILY Histone-fold 15 96 IPR009072 GO:0046982
Tpr7g3629 117 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 107 - -
Tpr7g3629 117 PANTHER HAP5 SUBUNIT OF HAP COMPLEX 1 107 - -
Tpr7g3629 117 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 23 87 IPR003958 -
Tpr7g3629 117 Gene3D Histone, subunit A 14 102 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3629 Tpr-Chr7 44992237 44992614 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3629 22 112 CCAAT-HAP5 Transcription Factor Family AT3G48590 61.538 1.28e-33 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Tpr7g3629 CBFD_NFYB_HMF 1.2e-16 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3629 - - gmx:100777614 191.815