Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3624 ATGGAAAGCTTCAAGGTGCTATTAGTTTATACCTTTCTTCTCTTCAACTTGATACCAACCTTCAACACCTTAGAAACCATTGTTTTAGGACAATCTCTAAAACAAAATGAAACACTAATCTCAAAAAATGAAACTTTTGAAGCTGGTTTTTTCAACTTTCAACAATCAAATTTCCAATATTTTGGTATATGGTACAAAGATATTTCACCAAAAACACTTATATGGATTGCCAATAAAGATTCTCCATTACAAAACTCATCAGGATCTTTGAATCTTACTGATAAAGGAACTCTTGTTGTTCTTGATTCAAAAGGGGTTATGATATGGTCCACTAATTCATCAAAAACAGCTACAAAAGTTACAAAACCAATTGTGGAATTATTGGAAAGTGGAAACCTTATTGTGAAAGATGAGACCAACCCAGATGATGTTTTATGGCAAAGTTTTGATCTTCCTAGTGATACTTTGATTCCAGGTATGCGACTTCGAACCGATTTAGTAACTGGTGATTATAAAGGGTTGGTTTCTTGGACAGATACAGAAGATCCTGCTACTGGTTTATATTCATATCATATAGATTCTACTGGTTTTCCTCAAGTAGTGATTACTAAAGGAAATAAATTATTGTTTAGAGTTGGTTCTTGGAATGGAAATATTTTATCTGGAATTGCTTCTACAACACTTTACAAAGCTTATAATTTTTCATTTGTGATTACTGATAAAGAAGTTTCTTATGGATATGATCTTTTGGACAAGTCAGTTGTTTCGAGGTATATACTAACTTCAGCCGGGCAAATATCGCGTTACACTTTTTCGGATCAGTTAAATAGTTGGCAAATTTTCTTTGTTGGCCCTTCAGATCAGTGTGATAATTATGCTCTATGTGGTGGAAATGCTAATTGTGATGCTGCTAACTCGCCAAAAGTATGTGATTGTCTTGAAGGTTTCATTCCAAAGTCTCAAGAAAATTGGGATTCGCAGAAATGGTCGGATGGTTGTGTTAGGAAAGTGAAATTAGATTGTGATAACAACAGTGATGGTTTTTTGAAGCATGTGGGAATGAAGTTGCCAGATACATCAAAATCGTGGTTTAATAAGAGCATGAACCTTGATGAATGTGAGAGATTCTGTCTGGGAAATTGTTCTTGTACAGCTTATGCAAGTTTGGATATCAGAAATGGCGGTAGCGGTTGCTTGATTTGGTTTAATAACATTTTGGATGTCCGAAAATTACCCTCCGGAGGACAAGACCTTTACATAAGAGTTGCAGCTTCAGAACTAGACCATAACACAGGCTCGAAGAAGAAGAAGCTCGCTGGAATTCTAGTCGGATGTATTGTGTTTATTGTGATCCTGATAGTATTAGGATTCTTATTGCATCGTCGGAGAAAGAAACTAGAAAAACCAGGGGTGATTCCAATATTTAGCTCCAAGAATCAAACTGAAAGCAAAGAAAATGATGATATTGACATACCAATATTTGATCTACCAACCATAGCTAATGCAACCAATAACTTTTCCATTGATAACAAATTGGGGCAAGGAGGATTTGGACCAGTTTACAAGGGTAAATTGGAAAATGGACAAGACATAGCTGTGAAGAGGCTTTGCAATACTTCAGGACAAGGACCAAAAGAGTTCATAAATGAAGTTAAGTTAATTGCAAATCTTCAGCACAGAAATCTTGTGAAACTACTTGGCTGTTGCATTCAAAATGATGAGAAACTCTTGATATATGAATTCATGATCAACAGAAGCTTGGACTACTTCATTTTTGATGAAACTAGAAAAAGTTTACTGCATTGGACTCAACGATTCCAAATAATATGTGGAATTGCTCGAGGACTTCTTTATCTTCACGAAGATTCAAGATTAAGGATTATCCACAGAGATCTCAAGACCAGCAATATTCTTCTAGACGAAAATATGATTCCTAAAATATCAGACTTTGGTCTCGCTAGAACATTATGGGGAGATGAAGGTGAAGGCGAAACACGAAGAGTAGTAGGAACTTATGGTTACATATCTCCAGAGTTCGCAATCCGTGGATTTTTCTCAGTGAAATCTGATGTCTTTAGTTTCGGCGTTATTATATTAGAGACAATTAGTGGAAAAAAGAATCGAGAATATGTTGACTATGACGATCTTGACCTTCTTGGATTTGCATGGCGGATGTGGTCAGAACAAACACCATTGAAGCTAATTGACGAAACTCTACGCGATTCATTTGTTGAAGCCGAACCTGAAATATCGAGATGTATTCAGATAGGACTTTTATGTGTTCAAGAGAGAGCTGATGATAGGCCAGATATGTCAGCTGCAGTTCTAATGTTGAATGGTGAAAAATCATTGCCTAATCCAAAGGAACCGGCCTTTTATCCACACCAATTAGGATCTTCATCAGGAACTAGTAAGCTGCATTCAAATAATGAAGTGTATTCAAATAATGAAGTTTCCATGACATTGTTACAAGCAAGATAG 2481 0.3595 MESFKVLLVYTFLLFNLIPTFNTLETIVLGQSLKQNETLISKNETFEAGFFNFQQSNFQYFGIWYKDISPKTLIWIANKDSPLQNSSGSLNLTDKGTLVVLDSKGVMIWSTNSSKTATKVTKPIVELLESGNLIVKDETNPDDVLWQSFDLPSDTLIPGMRLRTDLVTGDYKGLVSWTDTEDPATGLYSYHIDSTGFPQVVITKGNKLLFRVGSWNGNILSGIASTTLYKAYNFSFVITDKEVSYGYDLLDKSVVSRYILTSAGQISRYTFSDQLNSWQIFFVGPSDQCDNYALCGGNANCDAANSPKVCDCLEGFIPKSQENWDSQKWSDGCVRKVKLDCDNNSDGFLKHVGMKLPDTSKSWFNKSMNLDECERFCLGNCSCTAYASLDIRNGGSGCLIWFNNILDVRKLPSGGQDLYIRVAASELDHNTGSKKKKLAGILVGCIVFIVILIVLGFLLHRRRKKLEKPGVIPIFSSKNQTESKENDDIDIPIFDLPTIANATNNFSIDNKLGQGGFGPVYKGKLENGQDIAVKRLCNTSGQGPKEFINEVKLIANLQHRNLVKLLGCCIQNDEKLLIYEFMINRSLDYFIFDETRKSLLHWTQRFQIICGIARGLLYLHEDSRLRIIHRDLKTSNILLDENMIPKISDFGLARTLWGDEGEGETRRVVGTYGYISPEFAIRGFFSVKSDVFSFGVIILETISGKKNREYVDYDDLDLLGFAWRMWSEQTPLKLIDETLRDSFVEAEPEISRCIQIGLLCVQERADDRPDMSAAVLMLNGEKSLPNPKEPAFYPHQLGSSSGTSKLHSNNEVYSNNEVSMTLLQAR* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3624 826 CDD B_lectin 31 152 IPR001480 -
Tpr7g3624 826 ProSiteProfiles PAN/Apple domain profile. 341 423 IPR003609 -
Tpr7g3624 826 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 14 826 - -
Tpr7g3624 826 CDD PAN_AP_plant 337 423 - -
Tpr7g3624 826 SMART ntp_6 343 422 IPR003609 -
Tpr7g3624 826 SMART serkin_6 506 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3624 826 SMART blect_4 30 152 IPR001480 -
Tpr7g3624 826 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 14 826 - -
Tpr7g3624 826 Pfam Protein tyrosine and serine/threonine kinase 507 775 IPR001245 GO:0004672|GO:0006468
Tpr7g3624 826 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 183 IPR036426 -
Tpr7g3624 826 Pfam PAN-like domain 341 408 IPR003609 -
Tpr7g3624 826 ProSiteProfiles Bulb-type lectin domain profile. 24 148 IPR001480 -
Tpr7g3624 826 Pfam D-mannose binding lectin 72 177 IPR001480 -
Tpr7g3624 826 PIRSF SRK 1 826 IPR024171 GO:0004674
Tpr7g3624 826 Gene3D - 21 149 IPR036426 -
Tpr7g3624 826 CDD STKc_IRAK 512 780 - -
Tpr7g3624 826 ProSiteProfiles Protein kinase domain profile. 506 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3624 826 SUPERFAMILY Protein kinase-like (PK-like) 491 808 IPR011009 -
Tpr7g3624 826 Gene3D Transferase(Phosphotransferase) domain 1 582 788 - -
Tpr7g3624 826 Pfam S-locus glycoprotein domain 210 320 IPR000858 GO:0048544
Tpr7g3624 826 Gene3D Hepatocyte Growth Factor 341 419 - -
Tpr7g3624 826 Gene3D Phosphorylase Kinase; domain 1 479 581 - -
Tpr7g3624 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3624 Tpr-Chr7 44964582 44969487 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3624 424 795 Receptor kinase-like Gene Family AT4G23190 50.000 1.04e-122 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr7g3624 PK_Tyr_Ser-Thr 1.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3624 - - ccaj:109805721 1147.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3624 7 44964582 44969487 Tpr7g3624 7 44964582 44969487 ECH