Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3611 ATGTATTCCGAACCAGAATTTCCCTATCCATGTAGTAGGAAGGATATGGAAACTATCAAGTACTACTTCGACGAAGAAACTGAGTTCATGGCCGCACCAAACTTCTTCGATGACTATCGGAACATTCTTATTCGCAGAAATGCCGTTTCGATAATCGCCAAGGTCACAAAGAAGGATGTTTCAGATGCATATGTTCCGTATCTTGCTATGAACTACTTTGATCGTTTCGTATCCCGTTACAACATTAAGTATGTGGAAGGTCGGACTGATACCGAAAAAGTTCGTTTGATTGCTATAACTTGTTTAACCATATCTGCCAAGATGAGGATAGACTCATTCTCGTTTGACCAGTTTTTGTCTGACCTATATAGGGACATGAACCTGATGATAAATCATCAGACGATAATGAGAATGGAGCTTCTCATTCTCCAAGTACTTAGCTGGAAAATGAAATCCGTGACTGCCTTATGTTTTCTTAACCACTATTACCCTCACTTTAGGCAATTCCGTGGTTTTAAACGCCGTAGCATTAATGAGATCATAGTTCAAGCTCAAGGAGAACACACCTTCGTTGACTACATACCTTCTCACATTGCGTTCTCCGCTTTTCTGGCTGCTGCCAACATTGCATATCCCTTAAAGTATAAGGAAATTGCAGAAGACATTGAAAGCAAACTTAATGATCAAGGGCAGGTGAAGGAATGCGCGAAGAAGATGATAGATCTTTGCAGAAGACTCAACATCCTGATTTGTACCCCTAGATCAGGAATTCACTCCGCTTCAGGTCAAGTTGTGGAATTACCCCAACAGGAAACCAAAGAAGCTGGAACACCAGAGATAAAGGAAATCCAACAGAACAACAGCAAGGCAGTGGTGGTCGATGATTCATCTGAAGAAGAAGAAGAAGACGAAGAGAGGACTGCGTTAATCGACAAGCGAAGACAGGACATAGGCAAGATGGAGACTTCTCAATTGCAGGTGCAGGAAGGGTGGGAGAAGTTATCTGATAAAAAAGATGTAGCAGCAGAAGAGACTGAGACATCCATTTCAGAGATTGAAGAGGAGCTTGTAGAACCAAAGAAGCTAATGAACTTTGAGCTGAAATGGGCCACTGATGTCCCATCACTAGAAGCGCAGCCACGGGATTCTACAATTATAAGCCTTAGGATACCAGGGACTGGAAATAATATAAATATAGGCTGTGCCTTTGGCTTTGAACCGTGTCGAGTTCAAAATGATTCAGTAGTTTCTTGTGCAGTTCAAACTATCGGTATTATTGGCATTGCTATTGAAATTGTTTCTCTTTACTTTTCTAATTGA 1320 0.4129 MYSEPEFPYPCSRKDMETIKYYFDEETEFMAAPNFFDDYRNILIRRNAVSIIAKVTKKDVSDAYVPYLAMNYFDRFVSRYNIKYVEGRTDTEKVRLIAITCLTISAKMRIDSFSFDQFLSDLYRDMNLMINHQTIMRMELLILQVLSWKMKSVTALCFLNHYYPHFRQFRGFKRRSINEIIVQAQGEHTFVDYIPSHIAFSAFLAAANIAYPLKYKEIAEDIESKLNDQGQVKECAKKMIDLCRRLNILICTPRSGIHSASGQVVELPQQETKEAGTPEIKEIQQNNSKAVVVDDSSEEEEEDEERTALIDKRRQDIGKMETSQLQVQEGWEKLSDKKDVAAEETETSISEIEEELVEPKKLMNFELKWATDVPSLEAQPRDSTIISLRIPGTGNNINIGCAFGFEPCRVQNDSVVSCAVQTIGIIGIAIEIVSLYFSN* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3611 439 Pfam Cyclin, C-terminal domain 153 244 IPR004367 -
Tpr7g3611 439 CDD CYCLIN 45 143 IPR013763 -
Tpr7g3611 439 SUPERFAMILY Cyclin-like 9 150 IPR036915 -
Tpr7g3611 439 Gene3D - 23 243 - -
Tpr7g3611 439 PANTHER CYCLINS 6 380 IPR039361 -
Tpr7g3611 439 Gene3D - 32 151 - -
Tpr7g3611 439 MobiDBLite consensus disorder prediction 285 305 - -
Tpr7g3611 439 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 6 380 - -
Tpr7g3611 439 Pfam Cyclin, N-terminal domain 18 150 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3611 Tpr-Chr7 44729835 44732604 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3611 17 208 Core Cell Cycle Gene Families AT1G70210 28.079 1.32e-16 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3611 K18812 - aprc:113855478 248.825