Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3609 ATGGCTTCCGATGCAGAGTTCACCATTCTCAGTCAGAAGGAAGCGGATTTCATAAAGACCTCCTACTTCCCCATTCAGCATAAATTCATGCCCAAACAAAACTTTTTCAAAAGTGCTCGCAACATTCTTTTTCGCCGCCATGCCGTTTCGATAATCGCCGATTACTCGAGGCGTATCGATCTCGATACATTTATTCCATATCTTGCTATGAACTATTTTGATCGCTTCTTTTCCATGACCAAAACGTTCAAGAAGGATGTGGAAGGTTGTAATAATGATACTGAAAAAGTTCGTTTGATTGCTATCTCTTGTCTCTCCATATCTGTCAAGATAAGGATGAAACACTTCTCAGTTGAACAGTTTTTGAGGGACAATAATTTGATGATAACTCCTCAGATGATAATGAAAATGGAGTTTAATATTCTCCATGAAATTCGCTGGACAATCCGACCTGTGACTCCCTTCACCTATCTGAACTTCTATTACCGTTACTTTAAAAGATTTGGTGGTTATAGTCGTCGTTGCATTAATGAGATCATAGTTCAAGCTCAAGGAGACCACACCTTTGTTCACTACCCACCTACTATGATTGCATCGACCGCTTTTCTGGCTGCTTCCCGGATTGCATATCCCTCAAAGTATAACAACATAGCACATCCCGAAGCACTTGCCAGACTTGGCCCTAAAGCGCAGGTGCTGCAATGTGCGAAGAAGATATTAAAGCTTTGCAGGAGAATGAAAATCCGGGTCGAGATCCCTCGGATTCAGATCCCTCGGATTCAGATCCCTGAATCAAGAGTTGGCTCCACTTCAAGTAAAGTCGTGGCAGTGCCCGAAAAACAAACCGAATATAGAAGGGCAAAGGCGGCGGCGGTGGTGGTTGATTCATCTGAAGAAGAAGAAGAAGGGACTGCATTAATCAGGCGTAAACGGAACACGGGCAAGACCTCAGAGACTTCTCAGGTGCAGGTGGAAGTAAAGGTGGTAGATAAATCTGATAAAAAAGGTGTAGCAACAGAGGAGATTGAGGCAGAAAATCGAAGTCTGGCCAAGGGCGAGGAAAAGGCAGTGGAAGTAACAGAAGCATCTAAAGAAGAAGGGACTGCATTAATCAGAAGAAAACAAGACATGGGCAAGACCACAGGGACTTCTCAGGTGCAGGTGCCAGTAAAGGCGGAGGAGGTAATGGTGGTCAATAAATCTGATAAAAAAGGTGTAGCAACAGAAGAGATTGAGGCAGAAAATCCAAGTCTGGCTAAGGGCAAGGAAAAGGCAGTGGAAGTAACAGAAACATCTGCTGATGATAAAGCCAGGGTTCAGGCTATAATCCGACGAGCATTGGAAAAGGGCAAGGCAGTAGTGGGTGAGGAGCCACAAACACAGATAGGAGGGTCCGTTTCAGAGATTTTAGAGCTTGTAGCCCCTAAGAAGCTAATGATGTTTGAGCTGAGGTGGCCCATGGAAGTTCCACTACTAGAAGCACTAGATATAAAACAAGCGCTGCCAGAAGTAGAAGAAGAAGAGGAACAAGAGTCGCAGACAGATGACAAAGGTACTGATGAGATAAAAAATTGTGGCTGCAACATTGGTTAG 1593 0.4407 MASDAEFTILSQKEADFIKTSYFPIQHKFMPKQNFFKSARNILFRRHAVSIIADYSRRIDLDTFIPYLAMNYFDRFFSMTKTFKKDVEGCNNDTEKVRLIAISCLSISVKIRMKHFSVEQFLRDNNLMITPQMIMKMEFNILHEIRWTIRPVTPFTYLNFYYRYFKRFGGYSRRCINEIIVQAQGDHTFVHYPPTMIASTAFLAASRIAYPSKYNNIAHPEALARLGPKAQVLQCAKKILKLCRRMKIRVEIPRIQIPRIQIPESRVGSTSSKVVAVPEKQTEYRRAKAAAVVVDSSEEEEEGTALIRRKRNTGKTSETSQVQVEVKVVDKSDKKGVATEEIEAENRSLAKGEEKAVEVTEASKEEGTALIRRKQDMGKTTGTSQVQVPVKAEEVMVVNKSDKKGVATEEIEAENPSLAKGKEKAVEVTETSADDKARVQAIIRRALEKGKAVVGEEPQTQIGGSVSEILELVAPKKLMMFELRWPMEVPLLEALDIKQALPEVEEEEEQESQTDDKGTDEIKNCGCNIG* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3609 530 SMART Cyclin_C_2 152 276 IPR004367 -
Tpr7g3609 530 MobiDBLite consensus disorder prediction 502 530 - -
Tpr7g3609 530 Pfam Cyclin, C-terminal domain 152 245 IPR004367 -
Tpr7g3609 530 SUPERFAMILY Cyclin-like 18 147 IPR036915 -
Tpr7g3609 530 CDD CYCLIN 45 142 IPR013763 -
Tpr7g3609 530 PANTHER CYCLINS 21 492 IPR039361 -
Tpr7g3609 530 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 21 492 - -
Tpr7g3609 530 Pfam Cyclin, N-terminal domain 25 149 IPR006671 -
Tpr7g3609 530 Gene3D - 27 244 - -
Tpr7g3609 530 Gene3D - 32 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3609 Tpr-Chr7 44711139 44713999 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3609 21 239 Core Cell Cycle Gene Families AT4G03270 29.130 4.61e-21 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3609 K18812 - aprc:113855478 210.305