Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3605 ATGGCACCCTCACACATGCAAAACTACTACTACAACACCACCGACGACGAAAACGACGTTGTTAACTACTACAACAATGTCGTGTACGAGGACGAAAGCGAGGACGAGTATCAGGAAGACGAAAAAGAAGAAATTGAGGCCAAAACCAAAACCAGAACCAAAAACAACGACATTGTTTTCAATGGTTCATCTTCATCACGTTGTTCATCATTTTCATTGAGTAGGGTAATACTTGACCCGAGAGGAAAATGGATTGAAGAATGGAACCGGATATTTCTATTGGTATGTGCAATGGGTTTATTTGTGGATCCATTATTTTTCTACACGTTGTCTATAAGTGACACGTGTATGTGTCTGTTTATTGACGGTTGGTTACTAGTTACCGTCACCGTTATCCGTTGCATGACGGACGCGTTACATCTATGGAATATTTGGTTACAGTTGTATATTGAGAAACGCTCCTCTTTTGGATTTGTTCATCGTACTACTCGTCCTCGTACTTCTTCTACACATGTTTTTCCTTACTTCAAATCTAATAAGGGGTTTTTCTTTGATATCTTTGTCATCCTCCCTCTTCCTCAGATTGTGTTATGGGTGACAATTCCGTCTATGTTAAAAGAAGGATCAATTACGCGGGTGATGACTGTATTGTTGACGATGTTCCTCTTTCAATACCTTCCTAAAATTTTTCACTCTGTCAACTTTGTGCGTCGCAAACTCGCAGCTGGTTACATTTTTGGAACAATTTGGTGGGGATTCGCTCTCAACATGATCGCTTATTTTGTTGCTTCCCATGCAGCAGGGGCATGTTGGTATTTATTGGGACTTCAAAGGGGAATGAAGTGTTTAGGAGAGCAATGTGAGACAACAACAGGTTGTGGTTTAAGAACAATGTGTTGCAAAGAACCAATATATTATGGAAGCTATAGCATGATGAAGAAATTAGAGAAAACAAGGTTGATATGGGCACATAACAAAGATGCAAGGTTTACATGTTTAGATACTGCTGATAACTATGAATATGGAGTTTATGAATGGAGTGTTCAACTTTTAACAAATAATAGTCGATTGGAAAAGATACTCCTCCCTATCTTTTGGGGCTTAATGACTCTTAGCACTTTTGGGAACCTCCAGAGCACAACAGAAAGGATGGAAACCGTTTTCAATATTATTGTGTTGACCAGTGGCCTCCTTCTAGTCACTATGCTAATCGGAAACATCAAGGTATTTTTACATGCTACAACATCCAAGAAACGAGAGATGAAATTGAAGATGAAGAACATTGAATGGTGGATGAACAAAAGACGCTTACCACAAGGACTCCGACAACGTGTTCGTAACTACGAGAGACAATGTTGGGCTGCGATGCGCGGGGTTGATGAATGCCAATTGATCAAAAACCTCCCCGAGGGTTTGAGAAGGGACATCAAATACCATCTTTGTTTGGGTTTGGTGAGACAGGTGCCATTATTTCAGCATATGGATGAATTGGTGCTAGAGAACATTTGTGACCGTGTCAAGTCCCTTGTATTCACAAAGGGAGAAACACTAACAAGAGAAGGAGATCCAGTTCAAAGAATGCTATTTGTAGTAAGGGGTCATCTTCAAAGTACCCAAGTCCTAAGAGATGGAGTAAAAAGTTGTTGCATGTTAGGGCCAGGAAACTTTAGTGGTGATGAGCTTCTATCATGGTGTTTAAGAAGGCCATTTATACCGCGCCTTCCGACATCATCATCAACCTTGGTCACACTTGAAACAACAGAGGTATTTGGACTTGAAGCTGAGGATGTCAAATATGTGACACAACATTTTAGGTACACATTTACAAAGGAAAATGTTAGGAGAAGTGTTAGATATTACTCACCTGGTTGGAGAACTTGGGCTGCTGTGGCAATTCAGTTGGCTTGGAGAAGATACAGACATAGATTGACTTTGACTTCGTTATCTTTTATTAGGCCTCGTAGACCTTTATCAAGGTCTACATCTATGGAAGAGGATAGACTTCGTCTGTATACAGCTTTGTTAACCTCACCAAAGCCTAATCAAGATGATTTTGACTCTTCATAA 2067 0.4015 MAPSHMQNYYYNTTDDENDVVNYYNNVVYEDESEDEYQEDEKEEIEAKTKTRTKNNDIVFNGSSSSRCSSFSLSRVILDPRGKWIEEWNRIFLLVCAMGLFVDPLFFYTLSISDTCMCLFIDGWLLVTVTVIRCMTDALHLWNIWLQLYIEKRSSFGFVHRTTRPRTSSTHVFPYFKSNKGFFFDIFVILPLPQIVLWVTIPSMLKEGSITRVMTVLLTMFLFQYLPKIFHSVNFVRRKLAAGYIFGTIWWGFALNMIAYFVASHAAGACWYLLGLQRGMKCLGEQCETTTGCGLRTMCCKEPIYYGSYSMMKKLEKTRLIWAHNKDARFTCLDTADNYEYGVYEWSVQLLTNNSRLEKILLPIFWGLMTLSTFGNLQSTTERMETVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKREMKLKMKNIEWWMNKRRLPQGLRQRVRNYERQCWAAMRGVDECQLIKNLPEGLRRDIKYHLCLGLVRQVPLFQHMDELVLENICDRVKSLVFTKGETLTREGDPVQRMLFVVRGHLQSTQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIPRLPTSSSTLVTLETTEVFGLEAEDVKYVTQHFRYTFTKENVRRSVRYYSPGWRTWAAVAIQLAWRRYRHRLTLTSLSFIRPRRPLSRSTSMEEDRLRLYTALLTSPKPNQDDFDSS* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3605 688 ProSiteProfiles cAMP/cGMP binding motif profile. 490 569 IPR000595 -
Tpr7g3605 688 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 6 684 - -
Tpr7g3605 688 Pfam Cyclic nucleotide-binding domain 510 598 IPR000595 -
Tpr7g3605 688 SUPERFAMILY Voltage-gated potassium channels 79 411 - -
Tpr7g3605 688 SUPERFAMILY cAMP-binding domain-like 416 604 IPR018490 -
Tpr7g3605 688 CDD CAP_ED 490 596 IPR000595 -
Tpr7g3605 688 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 6 684 - -
Tpr7g3605 688 Gene3D Helix hairpin bin 415 481 - -
Tpr7g3605 688 Gene3D Jelly Rolls 488 606 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3605 Tpr-Chr7 44662944 44668283 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3605 61 686 Ion Channels AT5G54250 73.618 0.0 962
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3605 K05391 - gmx:100800795 1021.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3605 7 44662944 44668283 Tpr7g3605 7 44662944 44668283 ECH