Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3603 ATGGCATTGATGGCAGCAAGCTCAGCAACTGTTGTTAAGCAAACCCCTTTCCTTGGTCAAAGGAAGGGTGCCAATCCTCTTAGAGATGTCGTCGCCATGGGAACTTCAAAAGTCACTATGGGAAATGAATTGTGGTATGGACCAGACAGAGTGAAATATTTGGGACCGTTTTCAGCTCAGACTCCTTCATACTTAACCGGAGAATTCCCCGGTGATTATGGATGGGACACTGCTGGATTATCTGCTGATCCAGAAGCATTTGCCAAGAACAGGGCTCTTGAGGTGATTCATGGAAGATGGGCTATGCTAGGAGCACTAGGATGCATCACACCAGAAGTACTTGAAAAATGGGTGAGAGTTGACTTCAAAGAACCAGTTTGGTTCAAAGCAGGATCACAAATATTCTCAGAAGGTGGACTTGACTACTTAGGAAACCCAAACCTTGTTCATGCACAAAGCATCTTAGCAGTACTAGGTTTCCAAGTTGTTCTAATGGGACTTGTCGAAGGATTCCGCATCAACGGTCTTCCTGGTGTTGGAGATGGCAACAATCTTTACCCTGGTGGCCAATACTTTGACCCTCTTGGACTTGCTGACGATCCCGTTACTTTCGCCGAACTTAAAGTGAAGGAAATCAAGAATGGAAGATTGGCTATGTTTTCAATGTTTGGTTTCTTTGTTCAAGCTATTGTTACTGGTAAAGGACCTTTGGAGAATCTTTTGGATCACCTTGATAACCCTGTTGCTAACAATGCTTGGGTTTATGCTACCAAGTTTGTACCTGGTGCTTAA 792 0.4407 MALMAASSATVVKQTPFLGQRKGANPLRDVVAMGTSKVTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGDGNNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGA* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3603 263 SUPERFAMILY Chlorophyll a-b binding protein 44 260 - -
Tpr7g3603 263 Pfam Chlorophyll A-B binding protein 62 229 IPR022796 -
Tpr7g3603 263 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 5 263 IPR001344 GO:0009765|GO:0016020
Tpr7g3603 263 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 5 263 - -
Tpr7g3603 263 Gene3D Chlorophyll a/b binding protein domain 52 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3603 Tpr-Chr7 44642538 44644153 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3603 8 262 Chloroplast and Mitochondria Gene Families AT2G05070 68.045 3.88e-124 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3603 K08914 - vvi:100260599 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3603 7 44642538 44644153 Tpr7g3603 7 44642538 44644153 ECH