Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3601 ATGATGTTATCACCTTCACCATCTGCTATTGCAAGAAGCTCTTTAGAAGAGATGCTTGATTCGCTTCGTCGGAGAGACGAAGAGGAGAAGCCTAAAGACCTACCGCCGGCATTGCCATCAAGGCCTATGTCTAGAGGCCGGGTGCCGTCGGCGAGAAGGTCTTTGCCTAAAAGCTTTAAGGTTGATGAAGAAAATGAAAAGGAAAAATTGGGGCATAAAAGGAAAGGAAGTTTTGGAAGCAAGAAGTTAATGTTGGATGTGGAATCTCCTTATGTTGTTGTTACAGAAGAGCATACTGTTGTTACTAGTGAACAACAATCTTCACCTGGTCCTGTTTCTTCAATTCCTGTTGATGATTCTTCTGTTGCTCCACTTTCTCAGGAATTGGTAGATGACAATGTTTCTTATTTCATCAAAAAGAAACTTCATGTTTGGTGTAAGCAACCAAAAGGGAAGTGGGGACTGGGAACAATACAGTCAACTTCGGGAGAACAAGCATCTGTTTCACTCTCAAATGGAAATGTTATGGAAGTGGCCAGAACAGAACTCCTACCAGCTAATCCTGATATTTTAGAGGGTGTGGATGATCTTATACAGCTCAGCTATTTGAATGAGCCCTCGGTTCTTCACAATCTTCAGTTTAGATATTCTCAAGATTTGATTTATAGTAAAGCTGGGCCGATTTTAATTGCGCTCAATCCCTTCAAAGATGTACCGGTTTACGGAAACGAATATGTCACTGCTTATAGGAATAAATCTCTTGATAGTCCTCACGTTTATGCAATGGTAGATGCAGCTTATAATGAGATGATAGGAGAAGATGTAAATCAGTCCATTATCATAAGTGGCGAGAGTGGAGCTGGGAAGACAGAAACAGCAAAAATTGCGATGCAATACTTAGCTGCTCTTGGTGGTGGCAGTTGTGGGATAGAAAATGAAGTTCTTCAGACAAATGTTATACTAGAAGCTTTTGGCAATGCAAAAACATCTCGGAATGATAACTCTAGTAGATTTGGGAAGTTGATTGAAATTCATTTCAGCGCAACGGGTAAAATGTGTGGGGCTAAAATTCAAACCTTTCTACTAGAAAAGTCAAGAGTTGTTCAACTGGCTGATGGCGAGAGGTCTTATCACATATTTTATCAACTTTGTGCTGGATCTTCAACTAGTCTTAAAGAGAAACTAAATCTTAGAGCGGCCAGCGAATATAAATATCTTAATCAAAGCGACTGCATGACGATTGATGGTGTCGATGATGCTAAAAAGTTTCATAAGCTGAAGAAAGCCTTGGATGTCGTTCAAATGAGCAAAGAAGAGCAAGAACGTGTCTTTAAGATGCTCGCTGCGATATTATGGCTGGGAAATATATCTTTCGAAGTTAAAGATAATGAAAATCACATTGAAGTGGTGAACGATGAAGCTGTAACCAGTGCTGCTTCGCTGATGGGTTGCAGTCCTGAGGGACTAATGACAGTATTATCTACTCATAAAATCAAAGCTGGCAAGGATACTATCACCAAAACATTGACATTGCGGCAGGCGATTGATGCAAGAGATGCATTAGCAAAATTTATCCATGCAAGCTTGTTTGACTGGCTAGTAGATCAAGTTAACAAGTCGCTTGAAGTGGGTAAACGACGTACCGGAAGATCCATAAGTATCCTCGATATTTACGGTTTTGAGTCATTCCAGAAAAACAGCTTTGAACAGTTATGCATAAACTATGCCAATGAGAGGCTTCAACAACATTTCAATCGGCATCTGTTTAAACTGGAGCAGCAGGACTACGAAATAGACGGCGTTGATTGGACCAAAGTAGATTTTGAGGACAATCAAGAGTGTTTGGATCTCATTGAGAAGAAGCCTATAGGGCTACTCTCTCTGTTGGACGAAGAATCAAATTTTCCGAGGGCCACTGATCTAACACTTGCCAACAAACTCAAACAGCACCTGCAAACTAATCCTTGCTTCAAAGGGGACTGGGGAAGAGGTTTCAGTGTTTGTCATTATGCAGGCGAGGTTTTGTATGATACAAGTGGCTTTCTAGAAAAGAACAGAGATCCAATGCCTTCCGATTCCATTCAGCTACTATCATCATGTAGTTGCGAACTGCTGCAATCGTTCTCCAAGACGCTTAACCACCAGTCTCAGAAGCAATCAAATTCACAGCACGCAGGGGCTTCTGATTCGCAAAAGCAGAGTGTTGGTACAAAGTTCAAGGGTCAATTATTCAAGTTAATGCATCAGTTGGAGAGCACGACGCCTCACTTTATTCGTTGTATAAAGCCAAACGCAAAGCAACATCCTGGAATGTATGATGAAGATCTTGTTCTCCAGCAACTCAAGTGTTGTGGAGTTTTGGAGGTTGTTAGAATTTCAAGGGCCGGATATCCTACTCGAATGACACATCAAGAGTTTGCCAGAAGGTATGGGTTTCTGCTCTATGAAGCCTACACATCTCAAGATCCATTGAGTGTCTCGGTTGCTGTTTTGCAACAGTTTAATATCCTTCCTGAAATGTACCAAGTTGGCTTCACCAAACTGTATCTTCGAACAGGGCAGGTTGGTGCACTCGAAGATAAGAGAAAACTGGTTTTGCAGGGAATACTTGGGGTTCAAAAATGCGTTCGCAGTCATCAAGCTCGCAGTCATTTCAATAAACTTAAGAATGGAGTGACCATTTTACAATCATTTGTTCGTGGGGAAATTGCAAGAAGGAAATATGGTGTTATGGTGAAGTCTTCTATAACTATTTCTTCTGAAAATATCGAGGAGATACAGGCTATCATAACACTACAATCTGTAATTCGTGGATGGTTGGTTCGAAAGCATCATAGTAGCTTGAATAAGTTGAAGAAACATCCTGAGAATGGAAAATCTAGGCGAAGGTCACGTTCGAAGATGTCATTCGACAAGGATGCGAAAGATCGGGTCCAAAATCTGCCTTCGGCTTTAGCAGAACTCCAAAGGCGGGTTATCAAGGCCGAAGCAACTATAGAGCAAAAAGAAGAGGAAAATGCTGAGTTGAGGGAACAGCTAAAACAGTTTGAGAAAAGGTGGATTGAATACGAGAAAAAGATGAAAACAATGGAGGAAATGTGGCAAAGACAAATGTCATCTCTGCAAATGAGTCTTGCTGCTGCTAAAACCAGCCTTGCTTCTGAGAATGCCAATGGTCAACCTTCAAGACATGATGTATCATTACCATCGAATTTCTGTTATGATTCCGAGGACACTATTTCGATGGGAGCTCGAACACCTCGAACACCCGGGAGCAGCACACCTTTGAAGTATTCTACTAGTCTATCTGAAGTCAGAGCAGCGAGAGACGGTAACGGTACAATTAACAATCTGATGAAAGAGTTCGAGCAGCGCAGACAGACATTCGAAGAGGATGCAAGAGCTTTGGTTGAAGTTAGACCAACAGCGCAATCTGCAAATCCGAATAACATTGATGACCTGAGAAAACTCAAACACAAGTTTGAAGGGTGGAAGAAAGAATACAAGACGCGGTTAAGGGAGACGAAAGCAAGAATTAAGTTAGGGAATTCAGAAATGGAGAGAAACCGGCGAAAATGGTGGGGGAAATTGAGTTCTAGAATACAATAA 3609 0.4142 MMLSPSPSAIARSSLEEMLDSLRRRDEEEKPKDLPPALPSRPMSRGRVPSARRSLPKSFKVDEENEKEKLGHKRKGSFGSKKLMLDVESPYVVVTEEHTVVTSEQQSSPGPVSSIPVDDSSVAPLSQELVDDNVSYFIKKKLHVWCKQPKGKWGLGTIQSTSGEQASVSLSNGNVMEVARTELLPANPDILEGVDDLIQLSYLNEPSVLHNLQFRYSQDLIYSKAGPILIALNPFKDVPVYGNEYVTAYRNKSLDSPHVYAMVDAAYNEMIGEDVNQSIIISGESGAGKTETAKIAMQYLAALGGGSCGIENEVLQTNVILEAFGNAKTSRNDNSSRFGKLIEIHFSATGKMCGAKIQTFLLEKSRVVQLADGERSYHIFYQLCAGSSTSLKEKLNLRAASEYKYLNQSDCMTIDGVDDAKKFHKLKKALDVVQMSKEEQERVFKMLAAILWLGNISFEVKDNENHIEVVNDEAVTSAASLMGCSPEGLMTVLSTHKIKAGKDTITKTLTLRQAIDARDALAKFIHASLFDWLVDQVNKSLEVGKRRTGRSISILDIYGFESFQKNSFEQLCINYANERLQQHFNRHLFKLEQQDYEIDGVDWTKVDFEDNQECLDLIEKKPIGLLSLLDEESNFPRATDLTLANKLKQHLQTNPCFKGDWGRGFSVCHYAGEVLYDTSGFLEKNRDPMPSDSIQLLSSCSCELLQSFSKTLNHQSQKQSNSQHAGASDSQKQSVGTKFKGQLFKLMHQLESTTPHFIRCIKPNAKQHPGMYDEDLVLQQLKCCGVLEVVRISRAGYPTRMTHQEFARRYGFLLYEAYTSQDPLSVSVAVLQQFNILPEMYQVGFTKLYLRTGQVGALEDKRKLVLQGILGVQKCVRSHQARSHFNKLKNGVTILQSFVRGEIARRKYGVMVKSSITISSENIEEIQAIITLQSVIRGWLVRKHHSSLNKLKKHPENGKSRRRSRSKMSFDKDAKDRVQNLPSALAELQRRVIKAEATIEQKEEENAELREQLKQFEKRWIEYEKKMKTMEEMWQRQMSSLQMSLAAAKTSLASENANGQPSRHDVSLPSNFCYDSEDTISMGARTPRTPGSSTPLKYSTSLSEVRAARDGNGTINNLMKEFEQRRQTFEEDARALVEVRPTAQSANPNNIDDLRKLKHKFEGWKKEYKTRLRETKARIKLGNSEMERNRRKWWGKLSSRIQ* 1203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3601 1202 Pfam IQ calmodulin-binding motif 892 908 IPR000048 GO:0005515
Tpr7g3601 1202 Pfam IQ calmodulin-binding motif 927 945 IPR000048 GO:0005515
Tpr7g3601 1202 Gene3D - 563 753 - -
Tpr7g3601 1202 PANTHER MYOSIN 57 1200 - -
Tpr7g3601 1202 Gene3D - 797 865 - -
Tpr7g3601 1202 Pfam Myosin head (motor domain) 194 851 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tpr7g3601 1202 Gene3D - 375 431 - -
Tpr7g3601 1202 MobiDBLite consensus disorder prediction 947 976 - -
Tpr7g3601 1202 MobiDBLite consensus disorder prediction 947 961 - -
Tpr7g3601 1202 CDD MYSc_Myo8 206 851 IPR036022 -
Tpr7g3601 1202 ProSiteProfiles IQ motif profile. 925 954 IPR000048 GO:0005515
Tpr7g3601 1202 Coils Coil 985 1033 - -
Tpr7g3601 1202 MobiDBLite consensus disorder prediction 56 73 - -
Tpr7g3601 1202 Gene3D Myosin VI head, motor domain, U50 subdomain 432 540 - -
Tpr7g3601 1202 ProSiteProfiles Myosin motor domain profile. 192 863 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tpr7g3601 1202 SMART iq_5 924 946 IPR000048 GO:0005515
Tpr7g3601 1202 SMART iq_5 887 909 IPR000048 GO:0005515
Tpr7g3601 1202 SMART iq_5 864 886 IPR000048 GO:0005515
Tpr7g3601 1202 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 912 IPR027417 -
Tpr7g3601 1202 Coils Coil 1119 1139 - -
Tpr7g3601 1202 MobiDBLite consensus disorder prediction 962 976 - -
Tpr7g3601 1202 Gene3D Kinesin motor domain 191 796 IPR036961 -
Tpr7g3601 1202 PRINTS Myosin heavy chain signature 222 241 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tpr7g3601 1202 PRINTS Myosin heavy chain signature 276 301 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tpr7g3601 1202 PRINTS Myosin heavy chain signature 319 346 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tpr7g3601 1202 PRINTS Myosin heavy chain signature 551 579 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tpr7g3601 1202 PRINTS Myosin heavy chain signature 604 632 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tpr7g3601 1202 MobiDBLite consensus disorder prediction 1 75 - -
Tpr7g3601 1202 SMART MYSc_2a 186 864 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tpr7g3601 1202 MobiDBLite consensus disorder prediction 17 35 - -
Tpr7g3601 1202 PANTHER MYOSIN-2 ISOFORM X1 57 1200 - -
Tpr7g3601 1202 ProSiteProfiles IQ motif profile. 888 917 IPR000048 GO:0005515
Tpr7g3601 1202 MobiDBLite consensus disorder prediction 713 734 - -
Tpr7g3601 1202 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 139 188 IPR004009 GO:0003774|GO:0005524|GO:0016459
Tpr7g3601 1202 Gene3D - 869 915 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3601 Tpr-Chr7 44615915 44625235 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3601 1 1196 Myosins gene family AT5G54280 62.116 0.0 1540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3601 K10357 - gmx:100819335 1867.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3601 7 44615915 44625235 Tpr7g3601 7 44615915 44625235 ECH