Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3596 ATGAACGGAAAAGCCAACGTTACCAAAGAACTTAACGCAAAGCACAAGAAGATACTGGAAGGACTTCTTAAACTACCAGAGAATCGGGAATGTGCTGACTGCAAAGCTAAAGCTCCAAGATGGGCTAGTGTAAATCTTGGCATCTTTATATGCATGCAGTGTTCAGGAATACATCGAAGTTTGGGGGTACATATATCAAAGGTTCGTTCTGCAACTCTTGACACTTGGCTTCCGGAGCAAGTTGCATTCATCCAATCAATGGGAAACGAGAGAGCAAATAGTTACTGGGAAGCAGAATTACCTCCAAATTACGATAGAGTTGGAATTGAAAATTTCATTCGTGCAAAGTATGAAGACAAGAGATGGGTTTCAAGGGATGGGAATCCGAAAACACCTTCTGGACTGCGTGAAGATAAATCTCCTTCACATTTGCAGAGGCCTGCGGAAAAAAGTGGGCATAGTTATGCCACTGTTCACGAGAATACTTTTGAGGAAAGGAAGAAAATCCAGCCATCAAATGCAGTTCCTGCTACAAGACGTAGGGTTCCTGCTCCTCGCAAAGTACCGGAGCAGGTAACTCCTGCTACCCAACCTCAGCACACTGAGAAAGTGGAACCCGTTGCCCCACAACAACCAGCTGAAACTTCAAAGCCGGCTACAGACACAGCTCAAAGTACCCCTCCCAAAGTAGACTATGCTACAGACCTTTTCAACATGTTATCTATGGATGACCAAAATGAAAATGGCTCCAAAGCAGCTGGTGCTACTACTGATGATATTAACTGGGCAGGTTTTCAGTCTGCTGTGGAGGGGTCAACAACCGAGAAGACTGGCCCACCAAACCCAGTTGAGAGTACTCAGTATGCACCTGGAATTGAGGATCTATTTAAAGATTCAATTTCTTTGACACCAAGTTTAGCTCCAGCAAAACCACAGAAAGATGTGAAAAATGATATAATGAGCCTCTTTGAGAAGAGCAATATAGTATCTCCATTTTCAATGCATCAACAACAGCTTGCCATGCTAGCACAGCAGCAGTCTCTTCTGATGGCTGCTGCAGCTAAATCTACTGGTGTGGATCACAAGTATCCAACTGGCATACAACAACCGAGTCCCAATGTTTCTGTTCAAAATTGGCCGGCTACTGGATTGCCGATATCTGGAGTAATGCCCATGGGTGCTCAGGGAGATATGCAGAAACTTATGCAGACTAGAAACATGACTCCAGCTATTCCAGCAGGGAACTCTGTTCAATATCCACCATCTGGTTTCTATGGTATGGGACAAGTTGGTCCAGTCAATGGTATGATGACAATGGGAGCTAATAAACCTCAATCAACTCCAGTGTCGTCAACCACTTCCAAGTCTGCGAAGGAATATGATTTTTCATCCTTAACACAAGGGATGTTTGCGAAACAATGA 1422 0.4409 MNGKANVTKELNAKHKKILEGLLKLPENRECADCKAKAPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNERANSYWEAELPPNYDRVGIENFIRAKYEDKRWVSRDGNPKTPSGLREDKSPSHLQRPAEKSGHSYATVHENTFEERKKIQPSNAVPATRRRVPAPRKVPEQVTPATQPQHTEKVEPVAPQQPAETSKPATDTAQSTPPKVDYATDLFNMLSMDDQNENGSKAAGATTDDINWAGFQSAVEGSTTEKTGPPNPVESTQYAPGIEDLFKDSISLTPSLAPAKPQKDVKNDIMSLFEKSNIVSPFSMHQQQLAMLAQQQSLLMAAAAKSTGVDHKYPTGIQQPSPNVSVQNWPATGLPISGVMPMGAQGDMQKLMQTRNMTPAIPAGNSVQYPPSGFYGMGQVGPVNGMMTMGANKPQSTPVSSTTSKSAKEYDFSSLTQGMFAKQ* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3596 473 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 130 IPR001164 GO:0005096
Tpr7g3596 473 MobiDBLite consensus disorder prediction 442 463 - -
Tpr7g3596 473 CDD ArfGap 19 117 - -
Tpr7g3596 473 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Tpr7g3596 473 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Tpr7g3596 473 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Tpr7g3596 473 SUPERFAMILY ArfGap/RecO-like zinc finger 15 124 IPR037278 -
Tpr7g3596 473 Gene3D Arf GTPase activating protein 2 130 IPR038508 -
Tpr7g3596 473 PANTHER ARF GTPASE ACTIVATOR 1 473 - -
Tpr7g3596 473 MobiDBLite consensus disorder prediction 124 146 - -
Tpr7g3596 473 MobiDBLite consensus disorder prediction 213 228 - -
Tpr7g3596 473 Pfam Putative GTPase activating protein for Arf 17 125 IPR001164 GO:0005096
Tpr7g3596 473 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 473 IPR044520 GO:0005096
Tpr7g3596 473 SMART arf_gap_3 16 130 IPR001164 GO:0005096
Tpr7g3596 473 MobiDBLite consensus disorder prediction 124 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3596 Tpr-Chr7 44566418 44572151 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3596 16 118 C2H2 Transcription Factor Family AT4G05330 51.351 8.74e-30 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3596 K12486 - gmx:100780452 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3596 7 44566418 44572151 Tpr7g3596 7 44566418 44572151 ECH