Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3586 ATGGAAAGTACCGATTCATCGACCGGTTCGCAACAACCTAATCTTCCGCCTGGATTTCGATTCCACCCGACTGATGAAGAGCTTGTTGTTCATTATCTCAAGAAAAAAGCTGCTTCAGCTCCTTTACCGGTAGCCATCATCGCCGAAGTTGATCTCTACAAATTCGATCCGTGGGAGCTACCGGCTAAGGCAACGTTTGGAGAGCAAGAGTGGTATTTCTTTAGTCCAAGGGATAGGAAGTATCCAAATGGTGCTAGGCCAAACAGGGCAGCAACTTCTGGTTATTGGAAGGCAACTGGTACTGATAAGCCCGTTTTAACTTCTGGTGGAACACAAAAAGTTGGTGTGAAGAAAGCTTTGGTTTTCTATGGTGGAAAACCACCAAGAGGAATCAAAACTAATTGGATCATGCATGAGTATAGGCTTGCTGATAATAAGCCTAATAATAGGCCTCCTGGTTGTGACTTGGGCAACAAGAAAAACTCTCTAAGGCTTGATGATTGGGTGCTATGCCGAATCTACAAGAAAAGCAACACACATCGATCACCGGTGGAACATGATAGGGAAGAGTCAATGGATGATATGATAAACGGAGTACCTCCATCGATCAACGTGGGTCAAATGAATGCCGCAACAAGGTTTCATCATTTTTCAAAGATGTCAACAAATAGCTACAACAATGCATTGTTGGAGAATGATCAAAATTTATTAGAAGGAATGATGCTAAGCAACAATAATTTAGGAGTTTCAAATTCAAAGGCAGAGTTATCTTTTGTACCAACTATGACAACATCTTCAAATGCTAATTCACCTTCAAAAAGAACACTTTCTTCACTTTATAATTGGAATGATGAAGATGTTGCAGCTCAAGTTGGTACTTCATCATCTAACAAAAGGTTCAATTTGGAAAGTGTTGTGAGAAATGATCAAGATAATGGAACCGTTGCTACTTCTTTTGCTTCACTTCTTAATAATCTCCCTCAAACTCCTTCATTGCATCAACAACAACAAACAATGTTGGGATCAATACCATATCAAATTCAAGGGATGAATTGGTATGGATAA 1065 0.3991 MESTDSSTGSQQPNLPPGFRFHPTDEELVVHYLKKKAASAPLPVAIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLADNKPNNRPPGCDLGNKKNSLRLDDWVLCRIYKKSNTHRSPVEHDREESMDDMINGVPPSINVGQMNAATRFHHFSKMSTNSYNNALLENDQNLLEGMMLSNNNLGVSNSKAELSFVPTMTTSSNANSPSKRTLSSLYNWNDEDVAAQVGTSSSNKRFNLESVVRNDQDNGTVATSFASLLNNLPQTPSLHQQQQTMLGSIPYQIQGMNWYG* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3586 354 SUPERFAMILY NAC domain 7 176 IPR036093 GO:0003677|GO:0006355
Tpr7g3586 354 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Tpr7g3586 354 PANTHER NAC TRANSCRIPTION FACTOR 56 1 333 - -
Tpr7g3586 354 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
Tpr7g3586 354 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Tpr7g3586 354 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3586 Tpr-Chr7 44450379 44452840 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3586 1 353 NAC Transcription Factor Family AT3G15510 53.723 6.48e-123 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr7g3586 NAM 1.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3586 - - vra:106763825 574.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3586 7 44450379 44452840 Tpr7g3586 7 44450379 44452840 ECH