Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3584 ATGGGAATTCAAGAAAAAGACCCACTTTCACAATTGAGTTTACCACCTGGTTTTCGATTTTACCCAACCGATGAAGAGCTTCTTGTTCAATATCTATGTCGTAAAGTAGCTGGTCATCATTTTTCTCTTCCAATTATTGCTGAAATTGATCTCTACAAATTTGATCCATGGGTTCTACCAAGTAAGGCGATTTTTGGTGAGAAAGAATGGTATTTTTTTAGTCCAAGAGATAGGAAATATCCTAATGGTACTAGACCCAATAGAGTTGCTGGATCTGGGTATTGGAAAGCTACTGGAACTGATAAGATTATCACAAATGAAGGTAGAAAAGTTGGTATAAAAAAAGCACTTGTTTTTTATGTTGGTAAAGCTCCTAAAGGCACCAAAACTAATTGGATTATGCATGAGTATCGTCTACTTGATTCTTCTCGTAATAACGGTGGCACTAAGCTAGATGATTGGGTTCTATGTAGAATTTACAAGAAAAATTCTAGCGCACTAAAAACCAATCCAAACGGCGCGGTTTCAAGCGGAGAATACACTCAATACAGTAACGGTTCATCTTCGTCTTCATCATCCCACCGCGACTCCAACCTCGATGACGTTCTCGAATCACTTCCACAAATCGACGACCGTTGCTTCATGTTGCCACGTGTCAACTCACTAAGGACTATGCAACATCAACAACAACAAGAACATAAACTGAATATTCAAAATCTCAATTCAGCAAATAACAACAATTTCATGGATTGGTCAAATCCATCATTGATTTTGAACACTCAGTTTCAAGAAACACAAACTCAAGGAATGATGAATTTTGGTGGATGTAATGACCTTTATGTCCCTAATGTACCCACTTTATGTCAAATGGACTCTTCTGTTATTACAGATAAAACTAGTAAGATATCCGTGCATCCAACCGAGGAGGAGGTTCAAAGTGGGGCAAAAGCGAACCAAGTTGAGAATTTTAATTCTGGATTTCTTCAACGTGGTTCGAATGATTTTACTCAAGGAATGAATTTTTCTAATTCGGTTGACCCGTTTGGGTTTCGTTACCCGGTTCAACCAGTTGGATTTGGGTTCGGGCAATGA 1092 0.3837 MGIQEKDPLSQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLPIIAEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGTRPNRVAGSGYWKATGTDKIITNEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLLDSSRNNGGTKLDDWVLCRIYKKNSSALKTNPNGAVSSGEYTQYSNGSSSSSSSHRDSNLDDVLESLPQIDDRCFMLPRVNSLRTMQHQQQQEHKLNIQNLNSANNNNFMDWSNPSLILNTQFQETQTQGMMNFGGCNDLYVPNVPTLCQMDSSVITDKTSKISVHPTEEEVQSGAKANQVENFNSGFLQRGSNDFTQGMNFSNSVDPFGFRYPVQPVGFGFGQ* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3584 363 Gene3D NAC domain 23 167 IPR036093 GO:0003677|GO:0006355
Tpr7g3584 363 PANTHER NAC TRANSCRIPTION FACTOR 56 1 334 - -
Tpr7g3584 363 ProSiteProfiles NAC domain profile. 14 162 IPR003441 GO:0003677|GO:0006355
Tpr7g3584 363 MobiDBLite consensus disorder prediction 170 196 - -
Tpr7g3584 363 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Tpr7g3584 363 PANTHER NAC DOMAIN-CONTAINING PROTEIN 55 1 334 - -
Tpr7g3584 363 MobiDBLite consensus disorder prediction 170 199 - -
Tpr7g3584 363 SUPERFAMILY NAC domain 10 162 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3584 Tpr-Chr7 44424952 44426761 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3584 1 279 NAC Transcription Factor Family AT3G15500 61.074 3.42e-117 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr7g3584 NAM 7.9e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3584 - - mtr:MTR_2g079990 600.897