Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3583 ATGCAGTTTGATGAGGTTGTGTACAAAATCAAAGACAAAAAAGGAGGAATATTTAAGAAGAAAACAAAAGTAGAAGAGAAAACAATCTTAAAAGGAGTAACAGGAATTGTAAAACCAGGTGAAATGCTAGCAATGTTAGGTCCATCAGGAAGTGGCAAAACAACATTGTTAACAGCATTAGGAGGAAGACTTGGTGGAAAACTTTATGGAAAAATAACATATAATGAAAAACCATTTTCAAATACAATAAAAAGAAACACAGGTTTTGTTACACAAGATGATGTTCTTTACCCTCATTTAACAGTAACAGAAACACTTGTTTTTACAGCACTTTTAAGATTACCAAATACAGTTACTAAAGACGAGAAAGTTTCGCATGCGAAAAATGTTATTGATCAACTTGGTTTAACAAAGTGTAAAGATAGCATTGTTGGAAGTGCTTATCTAAGAGGTGTTTCTGGTGGAGAAAGGAAAAGAGTTAGTATTGGACAAGAATTGCTTATAAATCCTAGTTTATTGTTTCTTGATGAACCTACTTCTGGTTTGGATTCTACAACAGCGCAAAGGATTGTGTCGACTTTGTGGGATTTAGCGAGAGGTGGAAGGACTATTGTGATGACAATACATCAACCTTCAAGTAGATTATATTATATGTTTCATAAAGTTTTGTTACTTGCAGAAGGGAATGTTGTTTATTTTGGAAAAGGTTCTGAAGCTATTGAATATTTTTCTAATATTGGTTATTCTCCTGCTATGGCTATGAACCCTTCAGATTTCCTTTTGGATCTTGCAAATGGTATCTACACTGATGACATGAATCAAGACCATAACATAGACAAGCAAAAATTGATTTCAGCATTTAAAAGTAACTCTGAAACACAGTCAAAACCAGAAGAACATCAAGAAATCAATGACTCTGATACAAGTCAGGGGAGATTTCAAGAGACAGGTTCTGGAAAATGGCCTACTAGTTGGTCACAACAATTCTTTGTATTATTAAGAAGAGATGTCAAAGAGAGAAAATATGAATCGTTCTCTGGCTTAAGGATTGGTCAAGTCCTTGTGGTTGCACTTATGTCAGGACTACTTTGGTATAAATCTGATATGTCACACTTGCAGGATCAGATTGGACTACTATTCTTCATAACAGGCTTTTGGGGTTTTTTCCCTCTCTTCCAAGCAATCTTCACCTTCCCACAAGAACTAATGATGCTCGAAAAAGAACGATCCTCGGGAATGTATAGACTCTCCTCATACTTCATTTCAAGAATGGTAGCTGACCTACCAATGGAACTAGTCCTCCCTACAATCTTCCTTCTCATAACATATTTCATGGCAGGACTCAAAGCAACAATGATAAACTTTTTTCAAACACTTTTCAGTCTCTTACTCAATGTCTTAGTTGCACAAGGATTAGGACTAGCACTCGGCGCCGTTGTACTAGATCAAAAATCGGCAACGACACTTGCATCAGTAATCATGCTATGTTTCTTACTTGCTGGTGGATTTTATGTTCAGAATGTTCCAAAATTTATAGCTTGGGTGAAGTATATTTCTATTAGCTACTATACATATCAGCTATTTATTGGATCACAATATCATAGTGGTGAGACATACCCTTGTTCTAGTGGACAGTGTCTTATTGAAGAGTTTCCTCCTATAAAACAAGTGGGGTTTAATATGAATGGACAAGGGTTGGCTGCAATGGCTCTTGTTATAATGTTAATTGGTTATAGACTTATAGCTTATATTGCTCTTATGAGGATTGGTGTCACAAAGAAAAAGGCTTAA 1791 0.3557 MQFDEVVYKIKDKKGGIFKKKTKVEEKTILKGVTGIVKPGEMLAMLGPSGSGKTTLLTALGGRLGGKLYGKITYNEKPFSNTIKRNTGFVTQDDVLYPHLTVTETLVFTALLRLPNTVTKDEKVSHAKNVIDQLGLTKCKDSIVGSAYLRGVSGGERKRVSIGQELLINPSLLFLDEPTSGLDSTTAQRIVSTLWDLARGGRTIVMTIHQPSSRLYYMFHKVLLLAEGNVVYFGKGSEAIEYFSNIGYSPAMAMNPSDFLLDLANGIYTDDMNQDHNIDKQKLISAFKSNSETQSKPEEHQEINDSDTSQGRFQETGSGKWPTSWSQQFFVLLRRDVKERKYESFSGLRIGQVLVVALMSGLLWYKSDMSHLQDQIGLLFFITGFWGFFPLFQAIFTFPQELMMLEKERSSGMYRLSSYFISRMVADLPMELVLPTIFLLITYFMAGLKATMINFFQTLFSLLLNVLVAQGLGLALGAVVLDQKSATTLASVIMLCFLLAGGFYVQNVPKFIAWVKYISISYYTYQLFIGSQYHSGETYPCSSGQCLIEEFPPIKQVGFNMNGQGLAAMALVIMLIGYRLIAYIALMRIGVTKKKA* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3583 596 MobiDBLite consensus disorder prediction 289 320 - -
Tpr7g3583 596 Pfam ABC-2 type transporter 327 533 IPR013525 GO:0016020|GO:0140359
Tpr7g3583 596 Gene3D - 19 246 IPR027417 -
Tpr7g3583 596 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 252 IPR003439 GO:0005524
Tpr7g3583 596 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 2 590 - -
Tpr7g3583 596 Pfam ABC transporter 30 180 IPR003439 GO:0005524
Tpr7g3583 596 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 244 IPR027417 -
Tpr7g3583 596 ProSitePatterns ABC transporters family signature. 152 166 IPR017871 GO:0005524
Tpr7g3583 596 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 2 590 - -
Tpr7g3583 596 CDD ABCG_EPDR 29 234 - -
Tpr7g3583 596 SMART AAA_5 39 237 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3583 Tpr-Chr7 44413406 44416618 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3583 29 266 Calmodulin-binding Proteins AT2G36910 26.423 1.05e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3583 K05681 - gmx:100816135 907.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3583 7 44413406 44416618 Tpr7g3583 7 44413406 44416618 ECH