Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3573 ATGAACAAAACAATCCTGGTTTCTTCATCATCATCATCATCATCTTCTTCTTCTCAACAACAAGAATCACCGCAACACGATTTCTTCTACGAATCAAACGACCGTTTACTCTCTTCTTCTTGCTCTTGTTCTAACTCCAACTCCGAAGACGAAGACCAACAAGACCAAGAAAAAAACAATCATTCTACTAATTACAATTTTGCCCTTAACAGTTACGACATATGGATCTCTCAACCTTCTTCCGTTTCCGAACGTCGTTCTCGTTTACTCCAAACCATAGGTTTGTCATCCGACCCTGCTCTTTCACGCGGTAATCCTCTCCCACCTTACAATGCCATCTTCCGATCCAAATCTGACGGCAGTTACAATGACAACAACTCTGTTCATTCTAACAACTTTCTCTCTCTTCATAACAACTCTTCTTCATCTTCTCTTGTAAATAATAACTGTATTCCCGCTAATTGCGGCGGATCCCCCGGGAAACCACCGTCCGGAAAGAATTCTTCTCGAACAACATCTCTTTCCGGTGGTGCTGATTTTACTGCTTCTACAGCGGCAGAGATTGTGGTTTCTGGTGAAAGTGAAACCAAGTGTGATGAAATTGAAATAGGAGAGGAACAAGCTTGTACTATTAGAGATCTTGATAATGGAAAAGAGTTTGTTGTGAAAGAAATTAGAGAAGATGGAATGTGGAATAAAGTGAAAGAAGTTGCTACTGGTAGACAGTTGACTATGGAGGAATTCGAGATGACGGTCGGTCATTCTCCGATTGTGCAGGAGCTTATGCGGCGCCAGAATCATGAGGAAACCGGCGATGGAAATGTTGCCGGTAGTGGTGGTGGTGGTGGTGGCATTAATAATAATGGGAGTATTTCTAAGGGGAAGAAGAAAGGAGGGAGTTGGTTGAAAAGTATTAAGAGTGTAGCTAGTTCAATGGCAGGTCATAAGGAACGGCGGAGTAGTGATGAGAGAGATACTTCGTCGGAGAAAGGTGGTAGACGGTCGAGTTCAGCTACTGATGATAGTCAGGATGGTTCATTTCATGGACCTGAGAGGGTGAGAGTGAGACAATATGGAAAATCGTGTAAAGAGTTAACTGCATTGTTTAAGAGTCAAGAGATTCAAGCACATAATGGATCGATTTGGTGTATTAAATTTAGTTTAGATGGGAAATATCTTGCTAGTGCTGGTGAGGATTGTGTGATTCATGTTTGGCAGGTTGTGGAATGTGAGAGGAAAGGGGAGTTGTTACTTATGGAGAAACAGGAAGATGTTAATGTTAATATGTTGTTTCTTGTTAATGGGTCGCCGGAACCCGCTTTGTTGTCTCCTTTGGCGGATAATCATCCGGAAAGGAAGAGAAAAGGGAGGTCGTCCGTTAGTAGGAAATCGTTGAGCTTGGACCAGTTTGTGGTCCCTGAAAATGTGTTTGCACTCACAGAAAAACCCATTTGCTCCTTTCAGGGTCATTTACATGATGTGCTTGATCTCTCTTGGTCTAAGTCTCAGCACTTGCTCTCATCTTCAATGGACAAAACAGTACGGCTGTGGCATTTATCTAGCAAGTCTTGTTTGAAGATATTTTCACACAGTGACTATGTAACTTGCATCCAGTTTAATCCTGTTGATGATAAATACTTCATTAGTGGATCTCTGGATGCTAAGGTTCGCATATGGAGCATTCCTGATCGTCAAGTTGTTGATTGGATTGATCTTCATGAGATGGTCACTGCTGCTTGTTATACACCTGATGGTCAGGGAGCACTAGTTGGCTCATACAAGGGTAGCTGTCATTTATATAATACATCCGAAAATAAGTTGCAACAGAAAAGTCAGATCAATCTGCAGAACAAGAAAAAGAAATCTAATCACAAGAAAATTACTGGTTTCCAGTTTGCCCCAGGAAGTTCGTCAGAAGTACTTATCACATCTGCTGATTCTCGAATCCGTGTTGTTGATAGCATTGATCTGGTTCATAAGTTTAAAGGCTTTCGAAATGCAAGTAGCCAGATTTCAGCCTCCCTCACAGCAAATGGTAAATATATTGTCGCAGCAAGTGAGGATTCCCATGTATACATCTGGAAAAACGAAGCTGATTGCAGGCCTAACAGAAGTAAAGGTGTCACCGTGACACAGTCGTATGAACATTTTCACTGTAAAGATGTGTCAGTAGCCATTCCCTGGCCTGGTATGGGTGATGCATGGGACATGCATGATACATTTTCTGCAGAACAACCTGAGCATGATAGTAGCAACAACGACGAAATCTCATCTGCCAATCATCCTCCTACCCCTGTAGAGGAAAACTTTGGTGTTGAGGGTTCACGAGCTGCTTCAGGTTACCATAGTCCACATCATGCAACCATTGCAAGTGCGACAAATAGTTACTTTTTTGATAGAATTTCTGCAACATGGCCAGAGGAAAAACTTCTTCTAGCCGCAAGAAATCAAAGCCCTCGTGTCAGTATAGATTTCTCAAATGGGGTAAGTCAAAAAATGTCAGCATGGGGTATGGTGATTGTTACTGCCGGTCTTCGAGGTGAGATTAGAACTTTCCAAAATTTTGGATTGCCACTGCGAATATAA 2586 0.4203 MNKTILVSSSSSSSSSSSQQQESPQHDFFYESNDRLLSSSCSCSNSNSEDEDQQDQEKNNHSTNYNFALNSYDIWISQPSSVSERRSRLLQTIGLSSDPALSRGNPLPPYNAIFRSKSDGSYNDNNSVHSNNFLSLHNNSSSSSLVNNNCIPANCGGSPGKPPSGKNSSRTTSLSGGADFTASTAAEIVVSGESETKCDEIEIGEEQACTIRDLDNGKEFVVKEIREDGMWNKVKEVATGRQLTMEEFEMTVGHSPIVQELMRRQNHEETGDGNVAGSGGGGGGINNNGSISKGKKKGGSWLKSIKSVASSMAGHKERRSSDERDTSSEKGGRRSSSATDDSQDGSFHGPERVRVRQYGKSCKELTALFKSQEIQAHNGSIWCIKFSLDGKYLASAGEDCVIHVWQVVECERKGELLLMEKQEDVNVNMLFLVNGSPEPALLSPLADNHPERKRKGRSSVSRKSLSLDQFVVPENVFALTEKPICSFQGHLHDVLDLSWSKSQHLLSSSMDKTVRLWHLSSKSCLKIFSHSDYVTCIQFNPVDDKYFISGSLDAKVRIWSIPDRQVVDWIDLHEMVTAACYTPDGQGALVGSYKGSCHLYNTSENKLQQKSQINLQNKKKKSNHKKITGFQFAPGSSSEVLITSADSRIRVVDSIDLVHKFKGFRNASSQISASLTANGKYIVAASEDSHVYIWKNEADCRPNRSKGVTVTQSYEHFHCKDVSVAIPWPGMGDAWDMHDTFSAEQPEHDSSNNDEISSANHPPTPVEENFGVEGSRAASGYHSPHHATIASATNSYFFDRISATWPEEKLLLAARNQSPRVSIDFSNGVSQKMSAWGMVIVTAGLRGEIRTFQNFGLPLRI* 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3573 861 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 487 521 - -
Tpr7g3573 861 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 374 407 - -
Tpr7g3573 861 SMART WD40_4 480 518 IPR001680 GO:0005515
Tpr7g3573 861 SMART WD40_4 563 601 IPR001680 GO:0005515
Tpr7g3573 861 SMART WD40_4 521 560 IPR001680 GO:0005515
Tpr7g3573 861 SMART WD40_4 614 653 IPR001680 GO:0005515
Tpr7g3573 861 SMART WD40_4 367 406 IPR001680 GO:0005515
Tpr7g3573 861 SMART WD40_4 654 695 IPR001680 GO:0005515
Tpr7g3573 861 MobiDBLite consensus disorder prediction 312 337 - -
Tpr7g3573 861 MobiDBLite consensus disorder prediction 158 178 - -
Tpr7g3573 861 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 527 561 - -
Tpr7g3573 861 MobiDBLite consensus disorder prediction 161 178 - -
Tpr7g3573 861 MobiDBLite consensus disorder prediction 40 59 - -
Tpr7g3573 861 ProSiteProfiles Trp-Asp (WD) repeats profile. 527 561 IPR001680 GO:0005515
Tpr7g3573 861 PRINTS G protein beta WD-40 repeat signature 393 407 IPR020472 -
Tpr7g3573 861 PRINTS G protein beta WD-40 repeat signature 505 519 IPR020472 -
Tpr7g3573 861 PRINTS G protein beta WD-40 repeat signature 547 561 IPR020472 -
Tpr7g3573 861 ProSiteProfiles Trp-Asp (WD) repeats profile. 374 407 IPR001680 GO:0005515
Tpr7g3573 861 SUPERFAMILY WD40 repeat-like 371 697 IPR036322 GO:0005515
Tpr7g3573 861 ProSiteProfiles Trp-Asp (WD) repeats profile. 487 527 IPR001680 GO:0005515
Tpr7g3573 861 MobiDBLite consensus disorder prediction 1 27 - -
Tpr7g3573 861 MobiDBLite consensus disorder prediction 268 353 - -
Tpr7g3573 861 Pfam WD domain, G-beta repeat 523 560 IPR001680 GO:0005515
Tpr7g3573 861 Pfam WD domain, G-beta repeat 373 405 IPR001680 GO:0005515
Tpr7g3573 861 Pfam WD domain, G-beta repeat 482 517 IPR001680 GO:0005515
Tpr7g3573 861 Pfam WD domain, G-beta repeat 657 695 IPR001680 GO:0005515
Tpr7g3573 861 Gene3D - 363 720 IPR015943 GO:0005515
Tpr7g3573 861 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN-RELATED 123 861 - -
Tpr7g3573 861 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN-RELATED 18 101 - -
Tpr7g3573 861 PANTHER WD REPEAT DOMAIN 44 123 861 IPR040324 -
Tpr7g3573 861 PANTHER WD REPEAT DOMAIN 44 18 101 IPR040324 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3573 Tpr-Chr7 44306209 44311943 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3573 484 692 U-box Gene Family AT2G33340 25.446 8.49e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3573 K20241 - jre:109013457 1078.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3573 7 44306209 44311943 Tpr7g3573 7 44306209 44311943 ECH