Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3557 ATGGAGAAAAAATCACTTACTGCCTTGTCCTTCCTCTTCCTCGTTCTCTTTGTTGCACAACAAATTGTGGTGACTGAGGCACAAAACAAATGTGAGCATTTGGCTGATACATACAAAGGACCATGTTTCACTAATGCTAGCTGTGATGATCACTGCAAGAATAAAGAGCATTTTCGTAGTGGCACTTGCCATGGCTTTCGTTGTTGGTGCACTCATCAAAACTGTTAA 228 0.4123 MEKKSLTALSFLFLVLFVAQQIVVTEAQNKCEHLADTYKGPCFTNASCDDHCKNKEHFRSGTCHGFRCWCTHQNC* 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3557 75 CDD Knot1 40 71 IPR003614 GO:0006952
Tpr7g3557 75 Gene3D - 29 75 IPR036574 -
Tpr7g3557 75 PANTHER DEFENSIN 1 75 - -
Tpr7g3557 75 PANTHER DEFENSIN-LIKE PROTEIN 1 1 75 - -
Tpr7g3557 75 SMART gth_4 30 74 IPR003614 GO:0006952
Tpr7g3557 75 SUPERFAMILY Scorpion toxin-like 30 72 IPR036574 -
Tpr7g3557 75 Pfam Gamma-thionin family 31 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3557 Tpr-Chr7 44142996 44144099 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3557 7 73 Plant Defensins Gene Families AT1G61070 37.681 1.85e-10 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3557 - K04661 gmx:100779239 98.9821