Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3530 ATGGGTTGCATGTGTTGCAAGCCTTCTGCAATTGAGGATAGTAAGGAGAGTCCGAGAGAGCGATTATCGAACAAGTCTGTGCTCGATTCGCGTGTGTCTAGAGGAGCTTCGTCGAGGAGGGAGGAAGCATATAGGGTGAAGGAAAGAAGTGATAATAACAATGATGCAAGAACGGCGTTGATTGATAAGCAAGGGAATGGTTCTGTTAGAGTTCATGGTGATAATTTTGAAAGGAAAAGGGAGAAAATGGAGCATGTTGTTCCTCAACATCCGGGGATTGGTAGTGTTCCCAAGGCTATGGAAGGGGAACATGTTGCGGCTGGATGGCCGTCATGGCTGGCAGCTGTTGCTGGTGAAGCAATCAAGGGATGGCTTCCACGACGCGCGGATTCTTTTGAGAAGTTGGATAAAATTGGCCAGGGAACTTATAGTAATGTTTATAGAGCTCGTGATCTTGAACAAAGAAAGATTGTTGCTTTGAAAAAAGTGAGGTTTGATAATCTTGAGCCTGAGAGTGTTCGCTTCATGGCAAGGGAAATTCACATTCTACGTAGGCTTGATCATCCAAATGTCATAAAACTTGAAGGCTTGGTTACATCAAGGATGTCGTGCAGTTTATACCTTGTTTTTGAGTACATGGAGCATGACTTGGCCGGGCTTGCATCACATCCCGGACTCAAGTTTACAGAATCACAGGTTAAATGTTACATGCAGCAACTTTTACGTGGCCTTGATCATTGCCACAGCCGTGGTGTACTGCACCGTGACATTAAGGGTTCCAATCTTTTGATTGACAATAATGGAGTATTAAAAATTGCAGATTTTGGTTTGGCAAGCTTTTTTGATCCTAATCAAAATCAGCCGCTGACAAGCCGAGTTGTCACTCTTTGGTATAGGCCACCTGAACTTTTACTTGGAGCTACTTACTATGGCACTGCTGTAGATTTATGGAGTACAGGTTGCATACTTGCTGAGCTGTATGCTGGCAAGCCTATTATGCCTGGTAGAACTGAGGTGGAGCAATTACATAAAATTTTTAAACTTTGTGGTTCGCCTTCAGAGGACTATTGGAGAAAATCAAAATTGCCTCATGCAACGATATTTAAGCCTCAACAACCTTATAGGCGTTGTGTTGCTGAAACATTCAAAGACTTTCCTGCACCTGCAATAGAACTGATAGAGACACTTTTGTCCATAGACCCTGCTGATCGTGGAACTTCAGCATCTGCTTTGATAAGTGAGTTCTTCTCAACAAAGCCTTTACCTTGTGATCCTTCAAGCTTGCCAAAGTATCCTCCTAGCAAAGAATTTGATGCTAAAGTACGGGATGAAGAAGCTAGAAGACAAGGAGCAACAGGAAGCAAGGGCCAGAGACATGATCCCGAGAGAAGAGGTGTAAGAGAATCTCGAGCTATTCCTGCACCTGATGCCAATGCTGAACTGGTTGTGTCAATGCAGAAGAGACAAGGTCAGAACTATTCGCAAAGCAGGAGTGAGAAGTTTAACCCTCATCCTGAAGAAGTTGCTTCTGGTTTTCCCATTGAACCCCCTAGACCATCACAAGCCGCAGAAGCAACCGTGGATCCCCAGGCAAATCAACATAAAAGAGCCTCTCATTCAGGTCCACTGACTCACCGTGCTGCATGGGCGAAAGCCGGGAAGAACCAGGATGATGCTTCAAAGGTTTCAATGGGCGGTGACTTATCTACAGTCTCTGGCTTAGTTGCAGCCAGGAGGAGTATGCTGTCCGACGACCGCAGAGAAAGTGCTGGATCATCACAAGTGGAGGCTCCAAAACTAATTACTAGGTTCCCAGGTTCCTTCAAGGAGGCATCTGAATCATTGATGCAACAAAATCAAAATCAGAAGCATCATGTACATGCTTCTCAAAAGGAAGAAGCGAAAGGCAGTAATAAAGACCCAAATCTTGTTGGTTATGGATCAAAGGGTTATAAAATTCATTATTCTGGTCCGTTACTTGTTCCATCAAGCAACATGGATCAGATGTTGAAAGACCACGACCGCCAAATTCAAGAAGCGGTCAGAAGAGCACGTCTAGACAAGGCAAAAATGCGAAGACTCCAAGCTGACCAATTAAGCAATTCATTATTTGTTTCTGGTCGTTGA 2127 0.4424 MGCMCCKPSAIEDSKESPRERLSNKSVLDSRVSRGASSRREEAYRVKERSDNNNDARTALIDKQGNGSVRVHGDNFERKREKMEHVVPQHPGIGSVPKAMEGEHVAAGWPSWLAAVAGEAIKGWLPRRADSFEKLDKIGQGTYSNVYRARDLEQRKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFTESQVKCYMQQLLRGLDHCHSRGVLHRDIKGSNLLIDNNGVLKIADFGLASFFDPNQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQQPYRRCVAETFKDFPAPAIELIETLLSIDPADRGTSASALISEFFSTKPLPCDPSSLPKYPPSKEFDAKVRDEEARRQGATGSKGQRHDPERRGVRESRAIPAPDANAELVVSMQKRQGQNYSQSRSEKFNPHPEEVASGFPIEPPRPSQAAEATVDPQANQHKRASHSGPLTHRAAWAKAGKNQDDASKVSMGGDLSTVSGLVAARRSMLSDDRRESAGSSQVEAPKLITRFPGSFKEASESLMQQNQNQKHHVHASQKEEAKGSNKDPNLVGYGSKGYKIHYSGPLLVPSSNMDQMLKDHDRQIQEAVRRARLDKAKMRRLQADQLSNSLFVSGR* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3530 708 PANTHER CELL DIVISION PROTEIN KINASE 1 692 - -
Tpr7g3530 708 MobiDBLite consensus disorder prediction 12 27 - -
Tpr7g3530 708 MobiDBLite consensus disorder prediction 610 641 - -
Tpr7g3530 708 SUPERFAMILY Protein kinase-like (PK-like) 126 424 IPR011009 -
Tpr7g3530 708 MobiDBLite consensus disorder prediction 7 56 - -
Tpr7g3530 708 Gene3D Transferase(Phosphotransferase) domain 1 215 455 - -
Tpr7g3530 708 MobiDBLite consensus disorder prediction 435 470 - -
Tpr7g3530 708 Pfam Protein kinase domain 132 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3530 708 MobiDBLite consensus disorder prediction 484 499 - -
Tpr7g3530 708 ProSiteProfiles Protein kinase domain profile. 132 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3530 708 ProSitePatterns Protein kinases ATP-binding region signature. 138 161 IPR017441 GO:0005524
Tpr7g3530 708 Gene3D Phosphorylase Kinase; domain 1 119 214 - -
Tpr7g3530 708 MobiDBLite consensus disorder prediction 424 566 - -
Tpr7g3530 708 MobiDBLite consensus disorder prediction 34 56 - -
Tpr7g3530 708 CDD STKc_CDK9_like 132 416 - -
Tpr7g3530 708 SMART serkin_6 132 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3530 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Tpr7g3530 708 PANTHER CYCLIN-DEPENDENT KINASE 1 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3530 Tpr-Chr7 43869352 43876228 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3530 124 448 Core Cell Cycle Gene Families AT5G10270 53.959 2.77e-119 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Tpr7g3530 Pkinase 5e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3530 - - gmx:100792173 1282.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3530 7 43869352 43876228 Tpr7g3530 7 43869352 43876228 ECH