Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3513 ATGGTGTTAGTAAGAAGTTTCTTGTTAACACTATTTCAATGTTGTGTCTTATCTTGGTTTTTTTGTTTGTCTTTGAGTCTTGACAATGGAACAAAATCATGTGATCCTAGTGATTTATCAGCTTTGAAGGATTTTGCAGGAAACCTTACAAATGGTTCTTCAATTTTGAAAGCATGGTCTAATGATAGTGTTTGTTGCAATTGGATGGGAGTTTTTTGTGGTGATAACAATGGAGAATCTGTTAATAGAGTGACCAAGTTGATCCTTTCTGAGATGAGTCTAAATGGAACAATTTCACCTTCTTTAGCAAAACTAGATCATCTCAATGTGTTGAATCTTTCATTCAATCATCTTGAGGGTAAATTGCCTTCAGAATTTTCCAAGTTGAAGATGTTGAAGTTTCTTGATTTGAGCTATAACATGTTATCAGGACCTGTTAATGATACACTTTCTGGTTTGAATTCCATTGAAGTGTTGAATGTTTCGAGCAATTCATTTTCCGGAGAGTTCTTTCATCTTGTGGAATTTCCACATCTACTTGCTCTTAATGTGAGTAACAATTCATTCACAGGTAGATTCAGTTCTCAACTTTGTAATTCTTCTAAGAATCTTCACACACTTCATTTATCTTCGAACCTTTTCGATGGTAATCTTGAAGGTTTGAACAACTGTAACAAATCTCTCCAAAGGTTGCATTTGGATTCCAATTCATTTTCTGGCCCTTTACCTGATTCTTTGTATTCAATGTTGGCCTTGGAGCAATTATCACTTTCTGCCAACAATTTTTCTGGCATGTTAAGCAATGAGTTAAGTAAGCTTTCTAGCCTAAAATCTCTTGTGGTTTCTGCGAACCGTTTTTCTGGCAAAATTCCAAATGTTTTTGAGAATTTTTTGCAGTTAGAACAATTTGTAGCACATGCTAATTCATTTTCTGGATCATTACCTTCCACTTTGTCTTTATGCACTAAACTTAGAGTTCTTGATCTTAAGAATAATTCATTGTCAGGTTCAATTGATCTTAATTTCACCGGTTTGTCCAATCTTTGTTCACTCGATCTTGCTAGTAATCATTTTACCGGACCACTTCCTAGTTCATTGTCCTATTGTCGTGAATTGAAAGTTTTAAGCCTCGCTAGGAATGGTTTAAATGGTTCTATACCTGAAAGCTATGCCAAATTATCTTCTCTTTTGTTTGTGTCATTTTCAAACAATAGCTTAGTGAATTTATCTGGTGCACTTTCTGTTCTTCAGAACTGCAAAAACCTCACAACTCTAATCCTTACTAAGAATTTCCGCGGCGAAGAAATTCCGCAAAGTGTACCATCAGCAGGATTTGAAAGTCTTGTGGTGTTAGCACTCGGAAACTGTGGTCTTAAAAGTTATATTCCTTCTTGGCTATTGAAATGCAAGAAATTGGCGGTACTTGATTTGTCTTGGAACTCATTGAATGGTAGTATTCCTTCGTGGATTGGTGAAATGGACCGTTTGTTCTATTTGGATTTCTCAAACAATTCTCTCACGGGAGAAATACCGAAAAGTTTGACAGAGTTGAAGGGACTGGTGTGTTCAAATTGTGGAAGACCGAATTTTGCTTCTTATGCTTTCATTCCTCTCTTTGTGAAGAGAAATACTAGTGCTAGTGGTTTGCAATATAATCAAGCTTCAAGTTTCCCTCCTTCAATTTTATTGAGCAATAACATGTTAAATGGGAGTATATGGCCCGGAATCGGTAAGTTGAAGGCACTTCATGTGATGGATTTCAGCAGGAACAATATCAGCGGCACAATTCCGAGTAGTATTTCAGAGATGGAGAATTTGGAAACATTGGATTTATCTTATAATAATCTATCTGGAACAATCCCTCCTTCATTTAACAACCTCACATTCTTGTCGAAGTTCAGTGTGGCGCATAATCACTTGCAAGGTCCGATTCCAAGTGGGGGGCAGTTTCTAAGCTTCCCTAGTTCGAGCTTTGAGGGTAATTTGGGACTTTGCAGGGACATTGATATTGATAGTACTCGATGCAAAGTTGTTAACAACATGAGGCCAAATTTGCCTTCTCATTCGTCAAAAAAAATTAGTAGAAGCAGTGTATTTGGCATAACAATCAGCATAGGGGTAGGGCTTGCTTTGTTGCTTGCAATTATCGTGCTAAGAATGTCAAAGAGGGAAGATAAACCTATTGATAACTTTGACGAGGAGATGAATACTAGGAGGTCACACAGGTTATCATCCGAAGGATTTGTTTCATCGAAATTGGTCCTTTTTCAGAATTCAGATTGCAAGGATCTCGCAGTTTCTGATTTGTTAAAAGCAACAAACAATTTCAACCAGGCAAACATTGTTGGCTGTGGCGGCTTCGGTCTTGTTTACAAGGCATATCTTCCGAACGGCATGAAAGCAGCCGTTAAGAGGCTTTCTGGCGACTGTGGTCAGATGGAACGCGAATTCCAAGCCGAAGTTGAAGCCCTCTCGAGAGCTCAACACAAGAACCTTGTTTCTCTTAAAGGCTATTGTCGGCATGGCAACGATCGATTGCTAATTTACTCATATATGGAGAATGGTAGCTTGGATTATTGGCTTCACGAGTGCGTGGATGGAAATTCAGCTCTGAAATGGGATATACGACTCAAGATTGCACAAGGCGCGGCTCGTGGATTAGCTTACTTGCACAAGGGGTGTGAACCGTTCATAGTCCACCGTGATGTTAAATCTAGCAACATACTTTTGGATGATAAATTTGAAGCTCATTTGGCAGATTTTGGTCTCTCAAGACTACTTTCACCGTACGATACTCACGTCACAACAGACTTAGTAGGAACTTTAGGTTATATTCCTCCAGAATATAGTCAGACACTGACAGCAACATTCCGTGGCGATGTCTATAGTTTCGGCGTTGTTCTTCTCGAGCTTCTTACCGGTAGAAGGCCTGTGGAAGTCATCAAGGGGAAAAATTGCAGGAACTTGGTGTCTTGGGTTTATCAGATGAAATATGAAAAGAAGGAGCAAGAAATTTTTGATCAAGCCATTTGGGAAAAGGAGAGGGAGAAACAACTATTGGAGGTTCTTGGCATTGCTTGTAAATGTCTAGACCAAGATCCAAGACAAAGACCTTCGATTGAAATGGTTGTTTCATGGCTTGATAATGTAAGATTTGATGGCATTCAACAATGA 3174 0.3859 MVLVRSFLLTLFQCCVLSWFFCLSLSLDNGTKSCDPSDLSALKDFAGNLTNGSSILKAWSNDSVCCNWMGVFCGDNNGESVNRVTKLILSEMSLNGTISPSLAKLDHLNVLNLSFNHLEGKLPSEFSKLKMLKFLDLSYNMLSGPVNDTLSGLNSIEVLNVSSNSFSGEFFHLVEFPHLLALNVSNNSFTGRFSSQLCNSSKNLHTLHLSSNLFDGNLEGLNNCNKSLQRLHLDSNSFSGPLPDSLYSMLALEQLSLSANNFSGMLSNELSKLSSLKSLVVSANRFSGKIPNVFENFLQLEQFVAHANSFSGSLPSTLSLCTKLRVLDLKNNSLSGSIDLNFTGLSNLCSLDLASNHFTGPLPSSLSYCRELKVLSLARNGLNGSIPESYAKLSSLLFVSFSNNSLVNLSGALSVLQNCKNLTTLILTKNFRGEEIPQSVPSAGFESLVVLALGNCGLKSYIPSWLLKCKKLAVLDLSWNSLNGSIPSWIGEMDRLFYLDFSNNSLTGEIPKSLTELKGLVCSNCGRPNFASYAFIPLFVKRNTSASGLQYNQASSFPPSILLSNNMLNGSIWPGIGKLKALHVMDFSRNNISGTIPSSISEMENLETLDLSYNNLSGTIPPSFNNLTFLSKFSVAHNHLQGPIPSGGQFLSFPSSSFEGNLGLCRDIDIDSTRCKVVNNMRPNLPSHSSKKISRSSVFGITISIGVGLALLLAIIVLRMSKREDKPIDNFDEEMNTRRSHRLSSEGFVSSKLVLFQNSDCKDLAVSDLLKATNNFNQANIVGCGGFGLVYKAYLPNGMKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLKGYCRHGNDRLLIYSYMENGSLDYWLHECVDGNSALKWDIRLKIAQGAARGLAYLHKGCEPFIVHRDVKSSNILLDDKFEAHLADFGLSRLLSPYDTHVTTDLVGTLGYIPPEYSQTLTATFRGDVYSFGVVLLELLTGRRPVEVIKGKNCRNLVSWVYQMKYEKKEQEIFDQAIWEKEREKQLLEVLGIACKCLDQDPRQRPSIEMVVSWLDNVRFDGIQQ* 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3513 1057 SUPERFAMILY Protein kinase-like (PK-like) 758 1047 IPR011009 -
Tpr7g3513 1057 PRINTS Leucine-rich repeat signature 132 145 - -
Tpr7g3513 1057 PRINTS Leucine-rich repeat signature 603 616 - -
Tpr7g3513 1057 SMART serkin_6 776 1047 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3513 1057 PANTHER PHYTOSULFOKINE RECEPTOR 2 561 618 - -
Tpr7g3513 1057 PANTHER PHYTOSULFOKINE RECEPTOR 2 451 517 - -
Tpr7g3513 1057 PANTHER PHYTOSULFOKINE RECEPTOR 2 32 164 - -
Tpr7g3513 1057 PANTHER PHYTOSULFOKINE RECEPTOR 2 177 282 - -
Tpr7g3513 1057 PANTHER PHYTOSULFOKINE RECEPTOR 2 616 1050 - -
Tpr7g3513 1057 PANTHER PHYTOSULFOKINE RECEPTOR 2 282 442 - -
Tpr7g3513 1057 SUPERFAMILY L domain-like 33 302 - -
Tpr7g3513 1057 Gene3D Phosphorylase Kinase; domain 1 735 851 - -
Tpr7g3513 1057 Gene3D Ribonuclease Inhibitor 410 552 IPR032675 -
Tpr7g3513 1057 Gene3D Ribonuclease Inhibitor 37 155 IPR032675 -
Tpr7g3513 1057 Pfam Protein kinase domain 777 1045 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3513 1057 Gene3D Ribonuclease Inhibitor 562 665 IPR032675 -
Tpr7g3513 1057 ProSitePatterns Protein kinases ATP-binding region signature. 782 804 IPR017441 GO:0005524
Tpr7g3513 1057 Pfam Leucine rich repeat 582 640 IPR001611 GO:0005515
Tpr7g3513 1057 Pfam Leucine rich repeat 107 165 IPR001611 GO:0005515
Tpr7g3513 1057 Pfam Leucine rich repeat 323 382 IPR001611 GO:0005515
Tpr7g3513 1057 Gene3D Transferase(Phosphotransferase) domain 1 852 1053 - -
Tpr7g3513 1057 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 164 - -
Tpr7g3513 1057 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 177 282 - -
Tpr7g3513 1057 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 451 517 - -
Tpr7g3513 1057 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 616 1050 - -
Tpr7g3513 1057 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 561 618 - -
Tpr7g3513 1057 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 282 442 - -
Tpr7g3513 1057 SMART LRR_typ_2 603 626 IPR003591 -
Tpr7g3513 1057 SMART LRR_typ_2 129 152 IPR003591 -
Tpr7g3513 1057 SMART LRR_typ_2 249 272 IPR003591 -
Tpr7g3513 1057 SMART LRR_typ_2 273 296 IPR003591 -
Tpr7g3513 1057 SMART LRR_typ_2 345 369 IPR003591 -
Tpr7g3513 1057 SMART LRR_typ_2 393 416 IPR003591 -
Tpr7g3513 1057 SMART LRR_typ_2 105 128 IPR003591 -
Tpr7g3513 1057 ProSitePatterns Serine/Threonine protein kinases active-site signature. 898 910 IPR008271 GO:0004672|GO:0006468
Tpr7g3513 1057 ProSiteProfiles Leucine-rich repeat profile. 605 627 IPR001611 GO:0005515
Tpr7g3513 1057 Pfam Leucine rich repeat N-terminal domain 36 73 IPR013210 -
Tpr7g3513 1057 CDD STKc_IRAK 782 1049 - -
Tpr7g3513 1057 Gene3D Ribonuclease Inhibitor 156 409 IPR032675 -
Tpr7g3513 1057 ProSiteProfiles Protein kinase domain profile. 776 1052 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3513 1057 SUPERFAMILY L domain-like 308 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3513 Tpr-Chr7 43677743 43682360 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3513 54 291 Receptor kinase-like Gene Family AT1G55610 26.950 3.76e-10 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Tpr7g3513 Pkinase 7.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3513 - - mtr:MTR_2g078810 1822.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3513 7 43677743 43682360 Tpr7g3513 7 43677743 43682360 ECH