Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3503 ATGGCTCCAAGAGATAACAACAGAGTCGTCACCACCGCAATTAATGGGCCTAACTCAACGGCCCAGGCCCAAACTCAAGCCCAAAAAGAGATCCGTTTCAGAGGCGTGAGAAAACGTCCATGGGGTCGTTACGCCGCCGAGATCCGTGACCCAGGTAAAAAGACACGTGTCTGGCTAGGAACATTCGACACCGCAGAAGAAGCGGCGCGTGCTTACGACACAGCGGCACGTGAGTTTCGTGGTTCAAAAGCGAAAACAAATTTTCCAACACCGATGGAGATTATTAATAACCGTAGCCCAAGCCAAAGTAGTACTCTTGAATCACCTTCACCACCACCGCTTGATCTAACACTCACACCATTCGCCGCCGCCGGTTTCACCGGCGGAACCGGCGGCGGTGTTACGATGGCGTTTCCGGTTGCTCGTCCGGTTATGTTTTTCGACGCTTTTGCTCGGTCTGAAACAAAGCTTAGCGTCGTTGGTAGACGTGAGATGTGTGGATTTGATCTTCCTGTGACGGATTTTCGACGCGCCGCCGTTCAGAGTAGTGACTCTGGTTCATCTTCTTCTGTTGTTGATTATGAACATGTGCCACGTCAGAGACACTTGGATCTTGATCTTAATGTTCCACCTCCACCTGAAGTTGCTTGA 651 0.51 MAPRDNNRVVTTAINGPNSTAQAQTQAQKEIRFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFPTPMEIINNRSPSQSSTLESPSPPPLDLTLTPFAAAGFTGGTGGGVTMAFPVARPVMFFDAFARSETKLSVVGRREMCGFDLPVTDFRRAAVQSSDSGSSSSVVDYEHVPRQRHLDLDLNVPPPPEVA* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3503 216 CDD AP2 32 89 IPR001471 GO:0003700|GO:0006355
Tpr7g3503 216 MobiDBLite consensus disorder prediction 8 29 - -
Tpr7g3503 216 PRINTS Ethylene responsive element binding protein signature 33 44 IPR001471 GO:0003700|GO:0006355
Tpr7g3503 216 PRINTS Ethylene responsive element binding protein signature 55 71 IPR001471 GO:0003700|GO:0006355
Tpr7g3503 216 Gene3D AP2/ERF domain 31 90 IPR036955 GO:0003700|GO:0006355
Tpr7g3503 216 SUPERFAMILY DNA-binding domain 33 90 IPR016177 GO:0003677
Tpr7g3503 216 SMART rav1_2 32 95 IPR001471 GO:0003700|GO:0006355
Tpr7g3503 216 Pfam AP2 domain 32 81 IPR001471 GO:0003700|GO:0006355
Tpr7g3503 216 MobiDBLite consensus disorder prediction 85 112 - -
Tpr7g3503 216 MobiDBLite consensus disorder prediction 89 112 - -
Tpr7g3503 216 ProSiteProfiles AP2/ERF domain profile. 32 89 IPR001471 GO:0003700|GO:0006355
Tpr7g3503 216 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 21 203 - -
Tpr7g3503 216 PANTHER ERF FAMILY PROTEIN 21 203 - -
Tpr7g3503 216 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3503 Tpr-Chr7 43518539 43519894 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3503 17 148 AP2-EREBP Transcription Factor Family AT3G15210 62.585 6.85e-47 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Tpr7g3503 AP2 9.5e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3503 K09286 - gmx:100813652 194.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2726 3 27673149 27674249 Tpr7g3503 7 43518539 43519894 ECH
Tpr7g3503 7 43518539 43519894 Tpr7g3503 7 43518539 43519894 ECH