Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr7g3503 | ATGGCTCCAAGAGATAACAACAGAGTCGTCACCACCGCAATTAATGGGCCTAACTCAACGGCCCAGGCCCAAACTCAAGCCCAAAAAGAGATCCGTTTCAGAGGCGTGAGAAAACGTCCATGGGGTCGTTACGCCGCCGAGATCCGTGACCCAGGTAAAAAGACACGTGTCTGGCTAGGAACATTCGACACCGCAGAAGAAGCGGCGCGTGCTTACGACACAGCGGCACGTGAGTTTCGTGGTTCAAAAGCGAAAACAAATTTTCCAACACCGATGGAGATTATTAATAACCGTAGCCCAAGCCAAAGTAGTACTCTTGAATCACCTTCACCACCACCGCTTGATCTAACACTCACACCATTCGCCGCCGCCGGTTTCACCGGCGGAACCGGCGGCGGTGTTACGATGGCGTTTCCGGTTGCTCGTCCGGTTATGTTTTTCGACGCTTTTGCTCGGTCTGAAACAAAGCTTAGCGTCGTTGGTAGACGTGAGATGTGTGGATTTGATCTTCCTGTGACGGATTTTCGACGCGCCGCCGTTCAGAGTAGTGACTCTGGTTCATCTTCTTCTGTTGTTGATTATGAACATGTGCCACGTCAGAGACACTTGGATCTTGATCTTAATGTTCCACCTCCACCTGAAGTTGCTTGA | 651 | 0.51 | MAPRDNNRVVTTAINGPNSTAQAQTQAQKEIRFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFPTPMEIINNRSPSQSSTLESPSPPPLDLTLTPFAAAGFTGGTGGGVTMAFPVARPVMFFDAFARSETKLSVVGRREMCGFDLPVTDFRRAAVQSSDSGSSSSVVDYEHVPRQRHLDLDLNVPPPPEVA* | 217 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr7g3503 | 216 | CDD | AP2 | 32 | 89 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr7g3503 | 216 | MobiDBLite | consensus disorder prediction | 8 | 29 | - | - | |
Tpr7g3503 | 216 | PRINTS | Ethylene responsive element binding protein signature | 33 | 44 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr7g3503 | 216 | PRINTS | Ethylene responsive element binding protein signature | 55 | 71 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr7g3503 | 216 | Gene3D | AP2/ERF domain | 31 | 90 | IPR036955 | GO:0003700|GO:0006355 | |
Tpr7g3503 | 216 | SUPERFAMILY | DNA-binding domain | 33 | 90 | IPR016177 | GO:0003677 | |
Tpr7g3503 | 216 | SMART | rav1_2 | 32 | 95 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr7g3503 | 216 | Pfam | AP2 domain | 32 | 81 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr7g3503 | 216 | MobiDBLite | consensus disorder prediction | 85 | 112 | - | - | |
Tpr7g3503 | 216 | MobiDBLite | consensus disorder prediction | 89 | 112 | - | - | |
Tpr7g3503 | 216 | ProSiteProfiles | AP2/ERF domain profile. | 32 | 89 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr7g3503 | 216 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 21 | 203 | - | - | |
Tpr7g3503 | 216 | PANTHER | ERF FAMILY PROTEIN | 21 | 203 | - | - | |
Tpr7g3503 | 216 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr7g3503 | Tpr-Chr7 | 43518539 | 43519894 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr7g3503 | 17 | 148 | AP2-EREBP Transcription Factor Family | AT3G15210 | 62.585 | 6.85e-47 | 152 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Tpr7g3503 | AP2 | 9.5e-15 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr7g3503 | K09286 | - | gmx:100813652 | 194.897 |