Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3498 ATGCGATCATCGTCTTCTGCATCGGGTATGGGAGACGGTGGATCAGGTTCGAGGGTTAAGAAGAAACATAAGAAGTTAGATGCAATATGTGAGGAAGAGTATAATCGAAATCATGGTGAGTTGAATGAGGGTGATGATTTGAATCCTGATTTGGGGGTTCGGAGAAGCTCAAGGGTTAGGCGTGCCCCAGTTTTACTTGATGTTTCTCCTTCGCCCAAGAGGAAACGGCAGAAATTAGGGAAGGATGTAATGCCGAAGAGTGTGGAAAGTGATAAGAGTTTAGGGAGAGAAGGTGGTGGGAATTGGAGTTTGAGGTCGAGATCAAGGGGTAAAAACGTGGAATTTGAGGTGAAAGAGGAGATGGAATTGCCTAGGAGGAAAAGGAAGCTGTCTGATAAGGATTTGGAGGTTGTGGAGGTTGATACGAAGGACGGATTGGAGGTTGTGGAGGGAGATAGGGAGGAAGAATTGGAGGTTGCGGAGGGCAATAGGGAGGAGGAATTGGAGGTTGTGGAGGGTGATAGGGTGGAGGAATTGGAGGTTGTGGAGAATGATAGAAAGGAGGGATTGGAGGTTGATAAGAAAGAGGATTTTAAATGGTTCACGCGAAGAAAGTTTAAGTCGAAGAATAGAACGGGGAAAATTGAAGCCACAAATAATGAAAAAGGGCTTAAGGAAAATGAGTGTCAAGAAGTGGAGCTTGTAGTTGACGGGAGTGTTTCGGTTCCGGAGACCGAATTGGCTGATGAGGATCCAATAGATTTGAGGGATGAGAATGCTTCGTTGACAGGGAACGAGGAGAGAATTGAAACAGACAATTTGCAAGCTGAGGAGTGTAATGGTGACGTTGAACCGTCTCTGGTGGAATGTGTAGAAATTGTGGATGAACAGGGTGATCAGGTAGAGAGTGAGAAGGATGGAAAAAATGGTAGTGATGTGGCTGAAATTGCTGGAGTCTCAACTGAACGTGTAGATAATGAAGGTTCTGTTGATAAGGAGGTTGACATTGATGAAAACGTATCAAAAGATAAGAATGTTGAGAGAACGGATGAGTTGAAACAAGCATCAAATGACAAGTCCGAGTACCGATGTATCAAAGAGGGAAGACGGTGTGGATTGTGTGGAAGAGGGAGCGATGGTAAGCCTCCAAAAAGGTTAATTCAGGATAACGGTGAAAGTGAAAACGAAGCCTATAGCGGGTCATCAGCTTCAGAGGAGCCCACTTACGATACCTGGGATGGTTTTGATGATGAACCTGGCTGGCTTGGGCGTCTCTTGGGCCCTATTAATGATCGTTACGGTATTGCTGGAATATGGGTGCATCAGAATTGTGCTGTATGGAGTCCAGAGGTTTATTTTGCTGGCTTGGGATGCTTGAAAAATGTGAGGGCTGCACTTTGTCGAGGAAGAGCATTGAAGTGCACACGTTGTGGGAGGCGAGGGGCAACCATTGGTTGTCGTGTTGATCGTTGTCCTAAAACCTATCACTTGCCTTGTGCTAGAGCAAATGGTTGCATCTTTGATCATCGCAAATTTCTTATAGCTTGCACAGACCATCGACATCTTTTCCAACCTTCTGGTAATAAATATTTCACCCGGATAAAGAAGTTGAAGGCTAGGAAAATGATGTGGGAGACAAATAAACGTTCAAATGATGCTTCCAGAAAGGATATTGATGCAGAAGAGAGATGGTTGGAAAATTGTGGAGAGGATGAAGAATTTTTGAAACGCGAGAACAAGAGGCTTCATCGTGATTTATTGAGAATAGCCCCAGTATATATTGGTGGTTCAGATTCTGCCGCCAGTGAAAATTCATTTCAGGGATGGGAATCCGTTGCTGGGCTTAAAGATGTTATCCGTTGTATGAAAGAAGTTGTTATTATTCCTCTGCTCTATCCTAATTTCTTCGATAACTTAGGGCTTACACCTCCAAGAGGCATTCTTTTGCACGGGTATCCTGGAACAGGGAAAACCTTAGTAGTCCGGTCATTGATAGGTGCATGTGCTCGTGGAGATAGACGGATTGCATATTTTGCCCGTAAAGGTGCAGATTGCTTGGGGAAATACGTCGGTGATGCTGAGCGTCAACTAAGACTATTATTTCAGGTTGCTGAGAAATGTCAACCTTCTATAATATTCTTTGATGAGATAGATGGACTGGCACCCTGCAGAACTCGGCAGCAAGATCAGACTCATAGTTCTGTCGTGTCAACGTTGCTTGCTCTTATGGATGGTTTGAAATCTAGGGGATCAGTTGTAGTCATTGGTGCAACAAACCGTCCTGAAGCTGTTGACCCTGCACTTAGGCGCCCTGGAAGATTTGACCGGGAAATTTACTTTCCATTGCCGTCAACTGAAGACAGAGCTTCCATTCTCTCACTTCACACACAGAAATGGCCAAAACCAATTAGTGGATCTTTGCTTGGGTGGATTGCAAAAAAAACTTCTGGCTTTGCTGGTGCTGATCTCCAGGCTCTTTGTACACAAGCGGCCATGAATGCGCTGAAGAGGAACTTCCCTTTGCAAGAGGTGCTATCTGTAGCTGAAAAAAGACATTCTTCTGGTTGTAAGAACACTCCTCTTCCATCCTTTACTGTGGAGGAGAGGGATTGGGTAGAAGCTTTTTTGTCTTCACCATTACCTTGTTCCCAGAGAGAAGCTGGAAATGCTGCAAATGATGTAGTATGCTCCCCTCTTCCTGTCCAACTTGTTCCTTGTTTACTGCGGCCATTATGCACTATTCTTTTATCTCTTTATCTCGATGAACGTCTGTGGTTGCCACTTCCTATATCGAAAGCCGTGACATTGATTAAGAATGTAATGATTTGTGCTCTAGACAAAAAGAAAATGCCTATTGATCATTGGTGGTTGCACCTTGATGATTTTCTTCAAGAAACAAATGTTGCTTATGAGGTAAGTAAGTGCCTTAGTTGTTCTGGCATTTTATCTGCAGACCGTGGCTTTTCTGGGTCTTGTGATATTGTGGATCGTGATGATGATAAACCCTCCTTAAAGAATCATGCTAGCATGTGTAATGGTAGATTACCAGACATGTCATTTGCATCGACCAACAAATCAGGATTTCGAATACTGATTTACGGAAATCCCCGGTCTGGCCAGAGACATCTTGCTTCATGCCTTCTTTACTGTTTTGTTGGAAATATTGAAGTACAAAAGATTGATATGGCAACTATTACACAAGAAGGGCATGGAGATGTTGTGCAAGGGATTTCCCAAATATTAATGAAATGTGCTAGCATGAAATCTTGTGTAATATTCATGCCAAGAATTGATTTGTGGGCTGTGGTGGAAGATTCCCAAATTGCTGAGAAGACTGATTCTTGCTCAATATATCATCTATCATCTGAGACGGACACATCTTCTTTCACTCCAAGCCAAATTGTTGAGAAGGAAAATGGGATCAATACTGGGAAAAATTCAGCAGAGATGACCAAATGCCAAGCCAACAAAAAGGCTTCATATGCCTGGATGTCGTTTATTGAGCAGGTGGAGTCCATTGGTTCATCCACATCCTTGATGATTCTGGCTACTTCAGAAGCTCCCTATACTGAACTTCCACACAAGATAAGAGGATTCTTCAAGAGCTATCAATCTAAGGATACCCAATCAAGTTCTTTAGTACAAACAGTTCCTCAATTCTCTCTGCAGATTGATGGGAATTTTGATCACGACTTGGCGATCAATCTATCTGCAATCGAGCTTTTAAGAACTGTAGTTGAGCAGTGGGTTCAATTGATTCATCAGAGATCTCACGCTCGCATGGATGTCCATAAAGGAGACATAGCATATGAGTCAATTGAAGTTCGTAAAGAAAAGGTAACTCAGAGGAATGAAAACGAACCAGCCAACATGAATAAGGGCGAAGTCCAATCTCCCGAGTTCTTGACCAAAGGTCCACAGCCTAACAGTAGGTCACTGAAGGGAAAGTCGAATCTTTTAATGGCAATATCCACATTTGGCTATCAAATTCTTCTATACCCTCATTTTGCTGAACTTTGTTGGGTCACTTCAAAACTCAAAGAAGGTCCTTGTGCTGATGTGAGTGGGCCTTGGAGGGGTTGGCCTTTCAATTCATGTATAATTCGTCCTAACAATTCACAAGACAAGGTGATAATTTCCAGTAGCTCTGGTGGCACAAAAAGCAAAGAAAGTGCTGGCTTAGTTAGAGGCTTGGTTGCTGTTGGTTTATCAGCATACAAAGGTGTCTATAAATCAGTTAGGGAAGTTTCCCATGAGGTAAGGAATGTACTCGAGATCTTAACCGAGACAATTAACATGAAAATTCAAGCTGGGAAAAACAGATATCGGTATCTGCGTATTTTATCACAAGTTGCTTATTTGGAAGATATGGTCAACAACTGGGCTTATGCATTGCTTAGTCTAGATCAGGATTCCCCAGAGCTTGCAGCAAAGGTTATACCAGCCGCTGCCGGGCCTTTAAACAGTCATCTCGCATGCGAAGACCACCACCAAGCTGAAGGTGAGGATTGCCATTTGGTTGTTCCTGCTAATGGTGATGATTTGGAGACACTGGCGACAAGTCCTAAGGGAGTTCCTACTGCAACAACCGAGCGGCTTTCCTTGAATGAAATAAATGATAATTTAGCTAATACTGACTGTGATGGCCAAAAAGCATGTTCTGAAGGATCTCCAAATAACCATCCTTGTCCAGATACGCATATGAATGACTCTTGTCTTGGAAACCAACCTCTTCAGCCATCATTGAATCAGGAGAATGGGGTATTACCTGGACTGTCTGAATCGGTAACTGCTGAAAATCACGACACTGCAGACGGAGAACTTGGAATGTCGAAAGACTTGAATAAATCAACATGCACTGACTCTGCCGTCCTTTCTGAAAATGGATTTCACACAAACTGTGAACAAGGGAGTGTTGAGATTGGTAACTTAAAATCAAGTGATGTTGAATCTGATAAACATGAGAATACTATAGATCTCAATGCCTCTTCAAGTAAGGACAGTGGTCCAGCTGAATCTGGAGTTGTTTGCTTTTATCAATGTTGCCCTCAATGTCTCTGCAGTCTCTATCATTTGACACGCAAAATATTCGTTTGCGGGTGGGAATCGAATAAAAGCCATTGGACAATAGAAGATGTCCATGATGCTGTTTCGACATTATCCGTAGATCTTATTTCAGAAGTTAGAAAATGTTACATGGTAGAAGATTTCACTGATTTATCTAATAAAACGTCAAGACATGAAAAGCATGCAACATTTCTGATAACGTGCAATACCGAAAACCGAGGCAAAGATGTTGTGCCAGCTGAATGCGTTTCTCACTTGGCGAGTCAAGGTACAAGTGTAAGCAAAGACACTGGATCAAATGAACCAGCAAAGCTTGATTTGAAATTTGTTTTCAAAGATGGTGTGTTAGTTCTTGCAGAACCTGCAAAGGATTCCCCTCTTCACTGTAAATTTGAGAAATTGTGTCTTTGTTCACTGATAGAGTTAATAGTAAAAACTAAGGGCCCTTTAGATTAA 5523 0.4255 MRSSSSASGMGDGGSGSRVKKKHKKLDAICEEEYNRNHGELNEGDDLNPDLGVRRSSRVRRAPVLLDVSPSPKRKRQKLGKDVMPKSVESDKSLGREGGGNWSLRSRSRGKNVEFEVKEEMELPRRKRKLSDKDLEVVEVDTKDGLEVVEGDREEELEVAEGNREEELEVVEGDRVEELEVVENDRKEGLEVDKKEDFKWFTRRKFKSKNRTGKIEATNNEKGLKENECQEVELVVDGSVSVPETELADEDPIDLRDENASLTGNEERIETDNLQAEECNGDVEPSLVECVEIVDEQGDQVESEKDGKNGSDVAEIAGVSTERVDNEGSVDKEVDIDENVSKDKNVERTDELKQASNDKSEYRCIKEGRRCGLCGRGSDGKPPKRLIQDNGESENEAYSGSSASEEPTYDTWDGFDDEPGWLGRLLGPINDRYGIAGIWVHQNCAVWSPEVYFAGLGCLKNVRAALCRGRALKCTRCGRRGATIGCRVDRCPKTYHLPCARANGCIFDHRKFLIACTDHRHLFQPSGNKYFTRIKKLKARKMMWETNKRSNDASRKDIDAEERWLENCGEDEEFLKRENKRLHRDLLRIAPVYIGGSDSAASENSFQGWESVAGLKDVIRCMKEVVIIPLLYPNFFDNLGLTPPRGILLHGYPGTGKTLVVRSLIGACARGDRRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSTEDRASILSLHTQKWPKPISGSLLGWIAKKTSGFAGADLQALCTQAAMNALKRNFPLQEVLSVAEKRHSSGCKNTPLPSFTVEERDWVEAFLSSPLPCSQREAGNAANDVVCSPLPVQLVPCLLRPLCTILLSLYLDERLWLPLPISKAVTLIKNVMICALDKKKMPIDHWWLHLDDFLQETNVAYEVSKCLSCSGILSADRGFSGSCDIVDRDDDKPSLKNHASMCNGRLPDMSFASTNKSGFRILIYGNPRSGQRHLASCLLYCFVGNIEVQKIDMATITQEGHGDVVQGISQILMKCASMKSCVIFMPRIDLWAVVEDSQIAEKTDSCSIYHLSSETDTSSFTPSQIVEKENGINTGKNSAEMTKCQANKKASYAWMSFIEQVESIGSSTSLMILATSEAPYTELPHKIRGFFKSYQSKDTQSSSLVQTVPQFSLQIDGNFDHDLAINLSAIELLRTVVEQWVQLIHQRSHARMDVHKGDIAYESIEVRKEKVTQRNENEPANMNKGEVQSPEFLTKGPQPNSRSLKGKSNLLMAISTFGYQILLYPHFAELCWVTSKLKEGPCADVSGPWRGWPFNSCIIRPNNSQDKVIISSSSGGTKSKESAGLVRGLVAVGLSAYKGVYKSVREVSHEVRNVLEILTETINMKIQAGKNRYRYLRILSQVAYLEDMVNNWAYALLSLDQDSPELAAKVIPAAAGPLNSHLACEDHHQAEGEDCHLVVPANGDDLETLATSPKGVPTATTERLSLNEINDNLANTDCDGQKACSEGSPNNHPCPDTHMNDSCLGNQPLQPSLNQENGVLPGLSESVTAENHDTADGELGMSKDLNKSTCTDSAVLSENGFHTNCEQGSVEIGNLKSSDVESDKHENTIDLNASSSKDSGPAESGVVCFYQCCPQCLCSLYHLTRKIFVCGWESNKSHWTIEDVHDAVSTLSVDLISEVRKCYMVEDFTDLSNKTSRHEKHATFLITCNTENRGKDVVPAECVSHLASQGTSVSKDTGSNEPAKLDLKFVFKDGVLVLAEPAKDSPLHCKFEKLCLCSLIELIVKTKGPLD* 1841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3498 1840 MobiDBLite consensus disorder prediction 325 358 - -
Tpr7g3498 1840 MobiDBLite consensus disorder prediction 382 408 - -
Tpr7g3498 1840 MobiDBLite consensus disorder prediction 240 263 - -
Tpr7g3498 1840 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 365 522 IPR013083 -
Tpr7g3498 1840 CDD AAA 641 782 - -
Tpr7g3498 1840 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 609 840 IPR027417 -
Tpr7g3498 1840 SMART AAA_5 643 784 IPR003593 -
Tpr7g3498 1840 MobiDBLite consensus disorder prediction 1 107 - -
Tpr7g3498 1840 MobiDBLite consensus disorder prediction 298 358 - -
Tpr7g3498 1840 ProSiteProfiles Extended PHD (ePHD) domain profile. 408 520 IPR034732 -
Tpr7g3498 1840 MobiDBLite consensus disorder prediction 392 408 - -
Tpr7g3498 1840 Gene3D - 783 843 - -
Tpr7g3498 1840 MobiDBLite consensus disorder prediction 24 61 - -
Tpr7g3498 1840 Pfam ATPase family associated with various cellular activities (AAA) 647 782 IPR003959 GO:0005524|GO:0016887
Tpr7g3498 1840 ProSitePatterns AAA-protein family signature. 752 770 IPR003960 GO:0005524|GO:0016887
Tpr7g3498 1840 PANTHER AAA DOMAIN-CONTAINING 50 1836 IPR045199 -
Tpr7g3498 1840 Pfam AAA+ lid domain 808 840 IPR041569 -
Tpr7g3498 1840 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 50 1836 - -
Tpr7g3498 1840 Pfam PHD-like zinc-binding domain 441 520 - -
Tpr7g3498 1840 Gene3D - 608 782 IPR027417 -
Tpr7g3498 1840 MobiDBLite consensus disorder prediction 71 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3498 Tpr-Chr7 43464107 43474505 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3498 609 844 Calmodulin-binding Proteins AT3G56690 40.756 2.62e-44 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3498 - - gmx:100803849 2404.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3498 7 43464107 43474505 Tpr7g3498 7 43464107 43474505 ECH