Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr7g3498 | ATGCGATCATCGTCTTCTGCATCGGGTATGGGAGACGGTGGATCAGGTTCGAGGGTTAAGAAGAAACATAAGAAGTTAGATGCAATATGTGAGGAAGAGTATAATCGAAATCATGGTGAGTTGAATGAGGGTGATGATTTGAATCCTGATTTGGGGGTTCGGAGAAGCTCAAGGGTTAGGCGTGCCCCAGTTTTACTTGATGTTTCTCCTTCGCCCAAGAGGAAACGGCAGAAATTAGGGAAGGATGTAATGCCGAAGAGTGTGGAAAGTGATAAGAGTTTAGGGAGAGAAGGTGGTGGGAATTGGAGTTTGAGGTCGAGATCAAGGGGTAAAAACGTGGAATTTGAGGTGAAAGAGGAGATGGAATTGCCTAGGAGGAAAAGGAAGCTGTCTGATAAGGATTTGGAGGTTGTGGAGGTTGATACGAAGGACGGATTGGAGGTTGTGGAGGGAGATAGGGAGGAAGAATTGGAGGTTGCGGAGGGCAATAGGGAGGAGGAATTGGAGGTTGTGGAGGGTGATAGGGTGGAGGAATTGGAGGTTGTGGAGAATGATAGAAAGGAGGGATTGGAGGTTGATAAGAAAGAGGATTTTAAATGGTTCACGCGAAGAAAGTTTAAGTCGAAGAATAGAACGGGGAAAATTGAAGCCACAAATAATGAAAAAGGGCTTAAGGAAAATGAGTGTCAAGAAGTGGAGCTTGTAGTTGACGGGAGTGTTTCGGTTCCGGAGACCGAATTGGCTGATGAGGATCCAATAGATTTGAGGGATGAGAATGCTTCGTTGACAGGGAACGAGGAGAGAATTGAAACAGACAATTTGCAAGCTGAGGAGTGTAATGGTGACGTTGAACCGTCTCTGGTGGAATGTGTAGAAATTGTGGATGAACAGGGTGATCAGGTAGAGAGTGAGAAGGATGGAAAAAATGGTAGTGATGTGGCTGAAATTGCTGGAGTCTCAACTGAACGTGTAGATAATGAAGGTTCTGTTGATAAGGAGGTTGACATTGATGAAAACGTATCAAAAGATAAGAATGTTGAGAGAACGGATGAGTTGAAACAAGCATCAAATGACAAGTCCGAGTACCGATGTATCAAAGAGGGAAGACGGTGTGGATTGTGTGGAAGAGGGAGCGATGGTAAGCCTCCAAAAAGGTTAATTCAGGATAACGGTGAAAGTGAAAACGAAGCCTATAGCGGGTCATCAGCTTCAGAGGAGCCCACTTACGATACCTGGGATGGTTTTGATGATGAACCTGGCTGGCTTGGGCGTCTCTTGGGCCCTATTAATGATCGTTACGGTATTGCTGGAATATGGGTGCATCAGAATTGTGCTGTATGGAGTCCAGAGGTTTATTTTGCTGGCTTGGGATGCTTGAAAAATGTGAGGGCTGCACTTTGTCGAGGAAGAGCATTGAAGTGCACACGTTGTGGGAGGCGAGGGGCAACCATTGGTTGTCGTGTTGATCGTTGTCCTAAAACCTATCACTTGCCTTGTGCTAGAGCAAATGGTTGCATCTTTGATCATCGCAAATTTCTTATAGCTTGCACAGACCATCGACATCTTTTCCAACCTTCTGGTAATAAATATTTCACCCGGATAAAGAAGTTGAAGGCTAGGAAAATGATGTGGGAGACAAATAAACGTTCAAATGATGCTTCCAGAAAGGATATTGATGCAGAAGAGAGATGGTTGGAAAATTGTGGAGAGGATGAAGAATTTTTGAAACGCGAGAACAAGAGGCTTCATCGTGATTTATTGAGAATAGCCCCAGTATATATTGGTGGTTCAGATTCTGCCGCCAGTGAAAATTCATTTCAGGGATGGGAATCCGTTGCTGGGCTTAAAGATGTTATCCGTTGTATGAAAGAAGTTGTTATTATTCCTCTGCTCTATCCTAATTTCTTCGATAACTTAGGGCTTACACCTCCAAGAGGCATTCTTTTGCACGGGTATCCTGGAACAGGGAAAACCTTAGTAGTCCGGTCATTGATAGGTGCATGTGCTCGTGGAGATAGACGGATTGCATATTTTGCCCGTAAAGGTGCAGATTGCTTGGGGAAATACGTCGGTGATGCTGAGCGTCAACTAAGACTATTATTTCAGGTTGCTGAGAAATGTCAACCTTCTATAATATTCTTTGATGAGATAGATGGACTGGCACCCTGCAGAACTCGGCAGCAAGATCAGACTCATAGTTCTGTCGTGTCAACGTTGCTTGCTCTTATGGATGGTTTGAAATCTAGGGGATCAGTTGTAGTCATTGGTGCAACAAACCGTCCTGAAGCTGTTGACCCTGCACTTAGGCGCCCTGGAAGATTTGACCGGGAAATTTACTTTCCATTGCCGTCAACTGAAGACAGAGCTTCCATTCTCTCACTTCACACACAGAAATGGCCAAAACCAATTAGTGGATCTTTGCTTGGGTGGATTGCAAAAAAAACTTCTGGCTTTGCTGGTGCTGATCTCCAGGCTCTTTGTACACAAGCGGCCATGAATGCGCTGAAGAGGAACTTCCCTTTGCAAGAGGTGCTATCTGTAGCTGAAAAAAGACATTCTTCTGGTTGTAAGAACACTCCTCTTCCATCCTTTACTGTGGAGGAGAGGGATTGGGTAGAAGCTTTTTTGTCTTCACCATTACCTTGTTCCCAGAGAGAAGCTGGAAATGCTGCAAATGATGTAGTATGCTCCCCTCTTCCTGTCCAACTTGTTCCTTGTTTACTGCGGCCATTATGCACTATTCTTTTATCTCTTTATCTCGATGAACGTCTGTGGTTGCCACTTCCTATATCGAAAGCCGTGACATTGATTAAGAATGTAATGATTTGTGCTCTAGACAAAAAGAAAATGCCTATTGATCATTGGTGGTTGCACCTTGATGATTTTCTTCAAGAAACAAATGTTGCTTATGAGGTAAGTAAGTGCCTTAGTTGTTCTGGCATTTTATCTGCAGACCGTGGCTTTTCTGGGTCTTGTGATATTGTGGATCGTGATGATGATAAACCCTCCTTAAAGAATCATGCTAGCATGTGTAATGGTAGATTACCAGACATGTCATTTGCATCGACCAACAAATCAGGATTTCGAATACTGATTTACGGAAATCCCCGGTCTGGCCAGAGACATCTTGCTTCATGCCTTCTTTACTGTTTTGTTGGAAATATTGAAGTACAAAAGATTGATATGGCAACTATTACACAAGAAGGGCATGGAGATGTTGTGCAAGGGATTTCCCAAATATTAATGAAATGTGCTAGCATGAAATCTTGTGTAATATTCATGCCAAGAATTGATTTGTGGGCTGTGGTGGAAGATTCCCAAATTGCTGAGAAGACTGATTCTTGCTCAATATATCATCTATCATCTGAGACGGACACATCTTCTTTCACTCCAAGCCAAATTGTTGAGAAGGAAAATGGGATCAATACTGGGAAAAATTCAGCAGAGATGACCAAATGCCAAGCCAACAAAAAGGCTTCATATGCCTGGATGTCGTTTATTGAGCAGGTGGAGTCCATTGGTTCATCCACATCCTTGATGATTCTGGCTACTTCAGAAGCTCCCTATACTGAACTTCCACACAAGATAAGAGGATTCTTCAAGAGCTATCAATCTAAGGATACCCAATCAAGTTCTTTAGTACAAACAGTTCCTCAATTCTCTCTGCAGATTGATGGGAATTTTGATCACGACTTGGCGATCAATCTATCTGCAATCGAGCTTTTAAGAACTGTAGTTGAGCAGTGGGTTCAATTGATTCATCAGAGATCTCACGCTCGCATGGATGTCCATAAAGGAGACATAGCATATGAGTCAATTGAAGTTCGTAAAGAAAAGGTAACTCAGAGGAATGAAAACGAACCAGCCAACATGAATAAGGGCGAAGTCCAATCTCCCGAGTTCTTGACCAAAGGTCCACAGCCTAACAGTAGGTCACTGAAGGGAAAGTCGAATCTTTTAATGGCAATATCCACATTTGGCTATCAAATTCTTCTATACCCTCATTTTGCTGAACTTTGTTGGGTCACTTCAAAACTCAAAGAAGGTCCTTGTGCTGATGTGAGTGGGCCTTGGAGGGGTTGGCCTTTCAATTCATGTATAATTCGTCCTAACAATTCACAAGACAAGGTGATAATTTCCAGTAGCTCTGGTGGCACAAAAAGCAAAGAAAGTGCTGGCTTAGTTAGAGGCTTGGTTGCTGTTGGTTTATCAGCATACAAAGGTGTCTATAAATCAGTTAGGGAAGTTTCCCATGAGGTAAGGAATGTACTCGAGATCTTAACCGAGACAATTAACATGAAAATTCAAGCTGGGAAAAACAGATATCGGTATCTGCGTATTTTATCACAAGTTGCTTATTTGGAAGATATGGTCAACAACTGGGCTTATGCATTGCTTAGTCTAGATCAGGATTCCCCAGAGCTTGCAGCAAAGGTTATACCAGCCGCTGCCGGGCCTTTAAACAGTCATCTCGCATGCGAAGACCACCACCAAGCTGAAGGTGAGGATTGCCATTTGGTTGTTCCTGCTAATGGTGATGATTTGGAGACACTGGCGACAAGTCCTAAGGGAGTTCCTACTGCAACAACCGAGCGGCTTTCCTTGAATGAAATAAATGATAATTTAGCTAATACTGACTGTGATGGCCAAAAAGCATGTTCTGAAGGATCTCCAAATAACCATCCTTGTCCAGATACGCATATGAATGACTCTTGTCTTGGAAACCAACCTCTTCAGCCATCATTGAATCAGGAGAATGGGGTATTACCTGGACTGTCTGAATCGGTAACTGCTGAAAATCACGACACTGCAGACGGAGAACTTGGAATGTCGAAAGACTTGAATAAATCAACATGCACTGACTCTGCCGTCCTTTCTGAAAATGGATTTCACACAAACTGTGAACAAGGGAGTGTTGAGATTGGTAACTTAAAATCAAGTGATGTTGAATCTGATAAACATGAGAATACTATAGATCTCAATGCCTCTTCAAGTAAGGACAGTGGTCCAGCTGAATCTGGAGTTGTTTGCTTTTATCAATGTTGCCCTCAATGTCTCTGCAGTCTCTATCATTTGACACGCAAAATATTCGTTTGCGGGTGGGAATCGAATAAAAGCCATTGGACAATAGAAGATGTCCATGATGCTGTTTCGACATTATCCGTAGATCTTATTTCAGAAGTTAGAAAATGTTACATGGTAGAAGATTTCACTGATTTATCTAATAAAACGTCAAGACATGAAAAGCATGCAACATTTCTGATAACGTGCAATACCGAAAACCGAGGCAAAGATGTTGTGCCAGCTGAATGCGTTTCTCACTTGGCGAGTCAAGGTACAAGTGTAAGCAAAGACACTGGATCAAATGAACCAGCAAAGCTTGATTTGAAATTTGTTTTCAAAGATGGTGTGTTAGTTCTTGCAGAACCTGCAAAGGATTCCCCTCTTCACTGTAAATTTGAGAAATTGTGTCTTTGTTCACTGATAGAGTTAATAGTAAAAACTAAGGGCCCTTTAGATTAA | 5523 | 0.4255 | MRSSSSASGMGDGGSGSRVKKKHKKLDAICEEEYNRNHGELNEGDDLNPDLGVRRSSRVRRAPVLLDVSPSPKRKRQKLGKDVMPKSVESDKSLGREGGGNWSLRSRSRGKNVEFEVKEEMELPRRKRKLSDKDLEVVEVDTKDGLEVVEGDREEELEVAEGNREEELEVVEGDRVEELEVVENDRKEGLEVDKKEDFKWFTRRKFKSKNRTGKIEATNNEKGLKENECQEVELVVDGSVSVPETELADEDPIDLRDENASLTGNEERIETDNLQAEECNGDVEPSLVECVEIVDEQGDQVESEKDGKNGSDVAEIAGVSTERVDNEGSVDKEVDIDENVSKDKNVERTDELKQASNDKSEYRCIKEGRRCGLCGRGSDGKPPKRLIQDNGESENEAYSGSSASEEPTYDTWDGFDDEPGWLGRLLGPINDRYGIAGIWVHQNCAVWSPEVYFAGLGCLKNVRAALCRGRALKCTRCGRRGATIGCRVDRCPKTYHLPCARANGCIFDHRKFLIACTDHRHLFQPSGNKYFTRIKKLKARKMMWETNKRSNDASRKDIDAEERWLENCGEDEEFLKRENKRLHRDLLRIAPVYIGGSDSAASENSFQGWESVAGLKDVIRCMKEVVIIPLLYPNFFDNLGLTPPRGILLHGYPGTGKTLVVRSLIGACARGDRRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSTEDRASILSLHTQKWPKPISGSLLGWIAKKTSGFAGADLQALCTQAAMNALKRNFPLQEVLSVAEKRHSSGCKNTPLPSFTVEERDWVEAFLSSPLPCSQREAGNAANDVVCSPLPVQLVPCLLRPLCTILLSLYLDERLWLPLPISKAVTLIKNVMICALDKKKMPIDHWWLHLDDFLQETNVAYEVSKCLSCSGILSADRGFSGSCDIVDRDDDKPSLKNHASMCNGRLPDMSFASTNKSGFRILIYGNPRSGQRHLASCLLYCFVGNIEVQKIDMATITQEGHGDVVQGISQILMKCASMKSCVIFMPRIDLWAVVEDSQIAEKTDSCSIYHLSSETDTSSFTPSQIVEKENGINTGKNSAEMTKCQANKKASYAWMSFIEQVESIGSSTSLMILATSEAPYTELPHKIRGFFKSYQSKDTQSSSLVQTVPQFSLQIDGNFDHDLAINLSAIELLRTVVEQWVQLIHQRSHARMDVHKGDIAYESIEVRKEKVTQRNENEPANMNKGEVQSPEFLTKGPQPNSRSLKGKSNLLMAISTFGYQILLYPHFAELCWVTSKLKEGPCADVSGPWRGWPFNSCIIRPNNSQDKVIISSSSGGTKSKESAGLVRGLVAVGLSAYKGVYKSVREVSHEVRNVLEILTETINMKIQAGKNRYRYLRILSQVAYLEDMVNNWAYALLSLDQDSPELAAKVIPAAAGPLNSHLACEDHHQAEGEDCHLVVPANGDDLETLATSPKGVPTATTERLSLNEINDNLANTDCDGQKACSEGSPNNHPCPDTHMNDSCLGNQPLQPSLNQENGVLPGLSESVTAENHDTADGELGMSKDLNKSTCTDSAVLSENGFHTNCEQGSVEIGNLKSSDVESDKHENTIDLNASSSKDSGPAESGVVCFYQCCPQCLCSLYHLTRKIFVCGWESNKSHWTIEDVHDAVSTLSVDLISEVRKCYMVEDFTDLSNKTSRHEKHATFLITCNTENRGKDVVPAECVSHLASQGTSVSKDTGSNEPAKLDLKFVFKDGVLVLAEPAKDSPLHCKFEKLCLCSLIELIVKTKGPLD* | 1841 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr7g3498 | 1840 | MobiDBLite | consensus disorder prediction | 325 | 358 | - | - | |
Tpr7g3498 | 1840 | MobiDBLite | consensus disorder prediction | 382 | 408 | - | - | |
Tpr7g3498 | 1840 | MobiDBLite | consensus disorder prediction | 240 | 263 | - | - | |
Tpr7g3498 | 1840 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 365 | 522 | IPR013083 | - | |
Tpr7g3498 | 1840 | CDD | AAA | 641 | 782 | - | - | |
Tpr7g3498 | 1840 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 609 | 840 | IPR027417 | - | |
Tpr7g3498 | 1840 | SMART | AAA_5 | 643 | 784 | IPR003593 | - | |
Tpr7g3498 | 1840 | MobiDBLite | consensus disorder prediction | 1 | 107 | - | - | |
Tpr7g3498 | 1840 | MobiDBLite | consensus disorder prediction | 298 | 358 | - | - | |
Tpr7g3498 | 1840 | ProSiteProfiles | Extended PHD (ePHD) domain profile. | 408 | 520 | IPR034732 | - | |
Tpr7g3498 | 1840 | MobiDBLite | consensus disorder prediction | 392 | 408 | - | - | |
Tpr7g3498 | 1840 | Gene3D | - | 783 | 843 | - | - | |
Tpr7g3498 | 1840 | MobiDBLite | consensus disorder prediction | 24 | 61 | - | - | |
Tpr7g3498 | 1840 | Pfam | ATPase family associated with various cellular activities (AAA) | 647 | 782 | IPR003959 | GO:0005524|GO:0016887 | |
Tpr7g3498 | 1840 | ProSitePatterns | AAA-protein family signature. | 752 | 770 | IPR003960 | GO:0005524|GO:0016887 | |
Tpr7g3498 | 1840 | PANTHER | AAA DOMAIN-CONTAINING | 50 | 1836 | IPR045199 | - | |
Tpr7g3498 | 1840 | Pfam | AAA+ lid domain | 808 | 840 | IPR041569 | - | |
Tpr7g3498 | 1840 | PANTHER | P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN | 50 | 1836 | - | - | |
Tpr7g3498 | 1840 | Pfam | PHD-like zinc-binding domain | 441 | 520 | - | - | |
Tpr7g3498 | 1840 | Gene3D | - | 608 | 782 | IPR027417 | - | |
Tpr7g3498 | 1840 | MobiDBLite | consensus disorder prediction | 71 | 93 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr7g3498 | Tpr-Chr7 | 43464107 | 43474505 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr7g3498 | 609 | 844 | Calmodulin-binding Proteins | AT3G56690 | 40.756 | 2.62e-44 | 174 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr7g3498 | - | - | gmx:100803849 | 2404.79 |