Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3493 ATGAAGAAATCAAAGCAAACCCAAATGAACCCTAATTGGGTTCAACTCCAACAAAAGCTGAATCTTAATGGCCCCAAAGTTTCAAGGAACTTCAATGATTCTGATGATGACACCCCAAATTCAATATTGGGGAAACGTAAAGAGAGGATAGATGATGATGATGACGATGGTTCTGATGATTGTGAGATTAACCCTCTTGCTCCTGTAAATGATGATGCAAGTTTGACAGATGTTGTGGCCATGGATTGCGAAATGGTTGGGGTTGGTCAAGGAAACAAAAGTGCTCTTGCAAGAGTAACACTGGTTAACAAGTGGGGTAATGTTATTTATGACGAGTTTGTACGACCAATGGAGCGGGTTGTTGACTTCCGTACTAAAATTAGTGGCATAAGACCTCGAGATCTGAGAAAAGCAAAGGATTTTTCTACTGCTCAGAAGAAGGTGGCAGAGTTGATCCACGGAAGGATCCTTGTAGGTCATGCCTTGTCCAATGATCTTAAGGTCCATTTTAGTGGTTATTCTTTTTCTTTCTTTCTTAGATTTACATGTATATTCTCTTATCAGTCTGTAATCTGTGAACCTGGCACTGTACTTTTACAGGCATTATTATTAAGTCATCCGAAAAAGGATATACGCGATACCTCCGAGTACCCGCCGTTTCTAAGGTCAAGTGGTAGAGTAGCATTGCGGCATCTCGCTTCGGAACATCTTGGTGCTAAGATTCAAACAGGAGAGCACTGCCCGATAGATGACGCCCGTGCTGCTATGATGCTTTACCAGAAAAATAGAAAAGAATGGGAGAAGAGCACAAAAGGTAACTTTCGGTCCAAACAGAAGCAAAAGAAACGGAAGAAGATAAAAGATGCAGAATAA 873 0.4112 MKKSKQTQMNPNWVQLQQKLNLNGPKVSRNFNDSDDDTPNSILGKRKERIDDDDDDGSDDCEINPLAPVNDDASLTDVVAMDCEMVGVGQGNKSALARVTLVNKWGNVIYDEFVRPMERVVDFRTKISGIRPRDLRKAKDFSTAQKKVAELIHGRILVGHALSNDLKVHFSGYSFSFFLRFTCIFSYQSVICEPGTVLLQALLLSHPKKDIRDTSEYPPFLRSSGRVALRHLASEHLGAKIQTGEHCPIDDARAAMMLYQKNRKEWEKSTKGNFRSKQKQKKRKKIKDAE* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3493 290 CDD REX4_like 79 260 IPR037431 GO:0006364|GO:0008408
Tpr7g3493 290 PANTHER INTERFERON STIMULATED EXONUCLEASE GENE 20-RELATED 54 287 IPR034920 -
Tpr7g3493 290 Gene3D - 73 286 IPR036397 GO:0003676
Tpr7g3493 290 Coils Coil 279 290 - -
Tpr7g3493 290 SMART exoiiiendus 77 268 IPR013520 -
Tpr7g3493 290 Coils Coil 249 269 - -
Tpr7g3493 290 MobiDBLite consensus disorder prediction 1 59 - -
Tpr7g3493 290 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 54 287 - -
Tpr7g3493 290 MobiDBLite consensus disorder prediction 1 38 - -
Tpr7g3493 290 SUPERFAMILY Ribonuclease H-like 78 265 IPR012337 -
Tpr7g3493 290 Pfam Exonuclease 79 258 IPR013520 -
Tpr7g3493 290 MobiDBLite consensus disorder prediction 265 290 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3493 78 265 C2H2 Transcription Factor Family AT5G40310 32.057 3.76e-23 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3493 K18327 - gmx:100819122 382.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3493 7 43417758 43422722 Tpr7g3493 7 43417758 43422722 ECH