Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3478 ATGAACGGTGGAGAGATAGTGGAAGTTGACGGCGGTCACATTATAAGGTCAAGAGGTAGAAAAGACCGTCATAGTAAAGTTTGCACGGCGAAAGGGCCGAGAGATAGACGCGTCCGTCTCTCGGCCCATACCGCCATTGAATTTTATGATGTTCAAGATCGATTGGGCTTTGATAGGCCCAGTAAAGCCCTTGATTGGCTCATTAATAAAGCTAAGCCCGCCATCGATCAACTCGATCAACTTCCTCCATGGAAACCAAGTCTTCTTACTAAACAACAGCAACAAAACGACGACGTTTCGGAGAAACTGAACGATAACGGTAACGGAAATGAAAACGGCAACGAAAACGAGTTTCGTTTTCTTCAGAATTTTAACAGTAATAGCAACGGTTTTGTTTCGTTTGAAAGTGAAATTGGTGAAACGACGCCGTCTTCGCCGATTCAGTTTCCTGATTTGCTTTCGAGAACAGATAGTAATGATTTGAGGCTTTCGCTTCAACAGAATCAGCACGTGCAACCTCATGTGCTTTTCGCCGGAAACTTTGATGGAATGTTAGCGTGGAATTCCGGTGGCGGTGGTGGTGGTGCTGCTATTGATACTGGTGGTAGCGGTGGTGGTGGTGGTGGTGGTGGTAATAATGATGATGCTTCAGGTGGAGGTTTTGTGTTTCATGCTCCTTCACCGTCGCCGGTGGTTTTTCCGGCGGTGATGTATGGTCAGAATCAGTATCTTTCTCAGAGGGGACCCCTTCAGTCCAGTTACAATCCTTCAGTTCGTGCTTGGATAGATGCGCCGACGTTCGTTGCTGATTATCGACGTCAGGTAGCTGCCACGGCTGCTTTGGGTGCCGGATTTGCTTCTGGTGGCTTTTCTGGTTTCCGTGTGCCGGCACGAATTGGAGGTGATGATGATGATGAGGTGCATGGCGGTTTATCTAACAGGCCTTCGTCTGCTTCCTCAGATTCTCGCCGTTGA 975 0.48 MNGGEIVEVDGGHIIRSRGRKDRHSKVCTAKGPRDRRVRLSAHTAIEFYDVQDRLGFDRPSKALDWLINKAKPAIDQLDQLPPWKPSLLTKQQQQNDDVSEKLNDNGNGNENGNENEFRFLQNFNSNSNGFVSFESEIGETTPSSPIQFPDLLSRTDSNDLRLSLQQNQHVQPHVLFAGNFDGMLAWNSGGGGGGAAIDTGGSGGGGGGGGNNDDASGGGFVFHAPSPSPVVFPAVMYGQNQYLSQRGPLQSSYNPSVRAWIDAPTFVADYRRQVAATAALGAGFASGGFSGFRVPARIGGDDDDEVHGGLSNRPSSASSDSRR* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3478 324 PANTHER TRANSCRIPTION FACTOR TCP4 2 123 - -
Tpr7g3478 324 PANTHER TRANSCRIPTION FACTOR TCP4 172 323 - -
Tpr7g3478 324 Pfam TCP family transcription factor 19 117 IPR017887 -
Tpr7g3478 324 ProSiteProfiles TCP domain profile. 20 78 IPR017887 -
Tpr7g3478 324 MobiDBLite consensus disorder prediction 89 116 - -
Tpr7g3478 324 MobiDBLite consensus disorder prediction 1 27 - -
Tpr7g3478 324 MobiDBLite consensus disorder prediction 198 219 - -
Tpr7g3478 324 MobiDBLite consensus disorder prediction 298 324 - -
Tpr7g3478 324 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 172 323 IPR005333 GO:0003700
Tpr7g3478 324 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 123 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3478 Tpr-Chr7 43238811 43240733 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3478 4 323 TCP Transcription Factor Family AT3G15030 42.965 1.12e-70 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Tpr7g3478 TCP 8.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3478 - - cam:101504111 370.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4303 7 51831506 51834443 Tpr7g3478 7 43238811 43240733 ECH
Tpr7g3478 7 43238811 43240733 Tpr7g3478 7 43238811 43240733 ECH