Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3477 ATGATGAACAACGGAGTGTCCACTCTCCGCACGTGCCTCCGCCTCCCGGAGCGTCCAATTTTTCGTGCAGCTCCGTTCTCCTTCCGTTTCCGGCGCCGGTTTCTCGTAACCGCATCACTAACTGAGAAAAAGAAAGAGAAGGTGATAGTTATTTCTGGACCTACCGGTTCCGGCAAGAGTCGTCTCGCAATGGAACTCGCAAAACGCCTCAATGGTGAAATCGTTAGCGCCGATTCTGTTCAGGTGTATAAGGGTCTTGATATTGGATCTGCCAAGCCTTCCTTAAATGATAGAAAGGAAGTGCCGCATCATCTGGTTGATATACGTCACCCATCTGAAGATTATTCTGTTGGACAGTTTTTTGAGGATGCAAGGCAAGCGACAAGATCTATTCTTGACAACGGCCGTGTTCCAATAGTTGTTGGGGGAACTGGACTGTATTTAAGATGGTTCATATATGGAAAGCCAGATGTGCCTAAATCCTCTGTCGAGATAACATCTCAAGTTTGTATGGAGTTAGCTGAACTACAGAGAAATGACGACTGGGAAGCTGCTGTGCAGTTGGTGGTAAAGGCAGGTGATCCAAAGGTCCAACATATAGCAGTGAATGATTGGTACCGATTACGGCGTAGTCTAGAGATTATTAAGTCTAGTGGATCACCTCCTTCAGCTTTTCGGGTACCGTATGATTCTTTCAGGAAACAGGGTGATTGTAGAATTGCTGATAGTTCTGATTCAGCTGATACGAATACTTATAATGATGCAATCAAAGAAACCGCCGATTCAGTAAAGTTAGACTACGAGTTCATGTGTTTTTTCCTTTCTAGCGACAGACTTGACCTCTATAAATCAATTGATTATCGTTGTGAAGATATGCTATTAGGAGAAGATAGCCTTTTATTTGAGGCTCAGTGGCTTCTTGATACCGGTCTTCATCCAAACACCAACTCTGCAACAAAAGCAATTGGTTACAGACAAGCCACAGAGTACTTACTAGGATGCAGAGAACAAGGGGGTCAGAGTTCAGCTGGACAGTTTTACAGATTTTTGTCTGAATTTCAAAAAGCATCACGGAATTTTGCGAAACGGCAGTTGACTTGGTTTCGCAATGAGCGTATATACCATTGGCTTGATGCTTCTAAACCTCTGGAAACTATTCTGAACTTCATTCATGACGCATACCATGATCGGAATGGAAGACTATTTGTGCCTGAACACCTTAGAATGCCAAGAGATATTTCAAATTCCCGAATAGCTGCAAAACTAAAGGCTTACCGCACCAGAAATAGGCATTTTGTGAACGGGGAAGATTGTTATCCTATTTTGGAATGGATAAAGAAGACCCAAAAGTGA 1353 0.4324 MMNNGVSTLRTCLRLPERPIFRAAPFSFRFRRRFLVTASLTEKKKEKVIVISGPTGSGKSRLAMELAKRLNGEIVSADSVQVYKGLDIGSAKPSLNDRKEVPHHLVDIRHPSEDYSVGQFFEDARQATRSILDNGRVPIVVGGTGLYLRWFIYGKPDVPKSSVEITSQVCMELAELQRNDDWEAAVQLVVKAGDPKVQHIAVNDWYRLRRSLEIIKSSGSPPSAFRVPYDSFRKQGDCRIADSSDSADTNTYNDAIKETADSVKLDYEFMCFFLSSDRLDLYKSIDYRCEDMLLGEDSLLFEAQWLLDTGLHPNTNSATKAIGYRQATEYLLGCREQGGQSSAGQFYRFLSEFQKASRNFAKRQLTWFRNERIYHWLDASKPLETILNFIHDAYHDRNGRLFVPEHLRMPRDISNSRIAAKLKAYRTRNRHFVNGEDCYPILEWIKKTQK* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3477 450 Gene3D - 45 419 IPR027417 -
Tpr7g3477 450 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 9 38 449 - -
Tpr7g3477 450 Gene3D - 157 227 - -
Tpr7g3477 450 Hamap tRNA dimethylallyltransferase [miaA]. 48 388 IPR018022 GO:0008033
Tpr7g3477 450 Pfam IPP transferase 81 371 - -
Tpr7g3477 450 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 174 IPR027417 -
Tpr7g3477 450 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 38 449 IPR039657 -
Tpr7g3477 450 TIGRFAM miaA: tRNA dimethylallyltransferase 48 225 IPR018022 GO:0008033
Tpr7g3477 450 Coils Coil 445 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3477 Tpr-Chr7 43167794 43173451 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3477 51 225 C2H2 Transcription Factor Family AT2G27760 27.568 6.93e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3477 K00791 - gmx:100808814 715.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3477 7 43167794 43173451 Tpr7g3477 7 43167794 43173451 ECH