Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3476 ATGGGAGAAACATGTATTTCTTCGAAAACATCTGCCGAAGATGAGGGCATTGATTTAGCCCAAATCACACTTCGACCCCTTAATCTTTCAGACCTTGATGATCTCATGGTATGGGAAACCGATGAAAAAGTGGCCAATTTCGGCGGGAAACGTTACACCAGCAAAGATGAGGGCATCAACTTCATTGAAAACATAGCACCAAAGTTTCAATTGTGCAAAGCAATATGCCTCAATGATCGTGCTATTGGGTATATTACTATCTGCCCGAGTTCACCTTATGATAAAAGTAGGAAAAAATCTGCAGAACTTGGTTATGTTCTTGGTTCTAAATATTGGGGTAAAGGGATTACAACATGTGCAGTGAAACAAGTTGTTAAGGTTGCATTCAGTGAATTCTCACACTTGAAAAGACTTGAAGCTCTTGTTGATGTTGAAAATGTTGCTTCTCAAAGAGTGTTGGAGAAAGCTGGTTTCCAAAAGGAAGGAGTTCTAAGGAAGTATTGCTTCATGAAGGGAAAAAGCAGAGATATGATCATGTTCAGTCTTCTTTCTACTGATATCTTCAGCATAGATTCATTTTTTAGGCAAATTCCAAGTTCAATACCATGGAATAATATGGTAGGGCTGATAAAAAAATAA 639 0.3803 MGETCISSKTSAEDEGIDLAQITLRPLNLSDLDDLMVWETDEKVANFGGKRYTSKDEGINFIENIAPKFQLCKAICLNDRAIGYITICPSSPYDKSRKKSAELGYVLGSKYWGKGITTCAVKQVVKVAFSEFSHLKRLEALVDVENVASQRVLEKAGFQKEGVLRKYCFMKGKSRDMIMFSLLSTDIFSIDSFFRQIPSSIPWNNMVGLIKK* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3476 212 Pfam Acetyltransferase (GNAT) domain 22 159 IPR000182 GO:0016407
Tpr7g3476 212 PANTHER ACETYLTRANSFERASE (GNAT) DOMAIN PROTEIN 13 187 - -
Tpr7g3476 212 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 22 183 IPR016181 -
Tpr7g3476 212 Gene3D - 19 185 - -
Tpr7g3476 212 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 13 187 - -
Tpr7g3476 212 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 22 184 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3476 Tpr-Chr7 43161885 43162523 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Tpr7g3476 Acetyltransf_3 5.2e-26 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3476 - - mtr:MTR_5g006520 260.766