Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr7g3470 | ATGACTAAACTTGGCCCTCTTGAAGAGTCGCTTTTGAATGGTGAAGCTAGTGTAAACAAGGATTCTGATGCCAAAAACACACTAAAAACCTGTTATTCAAATGCTGGATTTTTCAGCATTCTTACTTTCTCATGGATGGGTCCACTAATAACTTTAGGAAGTAAAAAGACTTTAGACCATGAAGACCTCCCACTGCTTTCTACCAATGACAGTGCCTATGGAACTTTTTCTACTTTTAAGAAAAAGCTTGAGTTGGAGTGTGGTAATGTTAGGAATTTGACCACTATTAACCTCACCAAGGTGTTGTTCTTCTCAAATTGGCAAGGGATTCTTCTATCTGGCTTTTTTGCATTCTTGTTCGTATGTGCTTCTTATGTTGGACCCTACCTTATAGACAATTTTGTTCAATACCTCAATGATGAAAACAAGGTAAAAAATGAAGGCTATATTTTGGCTATGACGTTTGTTGCGGCAAATCTTATCGACTCTCTTTGTCAGAAGCACTTTGTGTTTAAGATCCAACAGGTTGGTGTTAGGGTGCAATCAATGTTGGTGTCAATGATCTATGCTAAAGGTTTGACTCTTTCGTGTCAATCGAAAGCGGAACACAGTGGTGGGGAAATCATCAACTTATTGACGGTTGATGCTGAAAGGATAGGTGACTTTTGTTGGTACATGCATGATATATGGGTGGCTGTACTGCAAGTTTCTTTGGCTTTGTTTATTCTTCATAGAAGTGTAGGGGTTGCTTCAGTAGCTGCTTTTGCCGCCACCGTAGTTGTGATGTTGCTAAACCTTCCTGTGGCATCATTGCAAGAGAGGTTCCAAGGTAAGTTAATGGAATTCAAAGATAAAAGAATGAAGGCGACATCTGAGATTCTAATGAACATGAGGATTCTTAAACTTCAAACATGGGAGATGAAATTCTTATCAAAGATTATTCAGATTAGGAAGTTAGAGGAGATTTGGCTAAAGAAATTTCTTGTTGGTTCAGCAATTGTTAAATTTATCTTCTCTAACGCCCCAACGTTTGTTGCTGTGGTTACTTTTGGTACTTGTGTTCTTATAGGCATTCCACTTGAATCAGGAAAGATCTTATCTGCACTTGCAACATTCAGAATTCTTCAAAATCCTATTTTTTGTCTTCCCGACACAATTTCAGTGATTGTAGAAACCAAGGTTTCTCTAGATAGGATTGTCGCGTTTCTTCGTCTAGATGATTTGCAGACCGATGTAGTGGAGAAGCTTCCACGCAGTAGTTCTGATGTAGCAATTGAGATAGAAGACGGAAATTTCACCTGGGATTTATCTTCTGTCAATACAACGTTGAAAAACATAAATATTAGAGTTTTTCATGGAATGAGGGTTGCCGTTTGTGGTACTGTTGGATCAGGAAAGTCTAGTTTACTTACTTGTATAATAGGGGAAATGCCAAAGCTATCTGGAACCTTGAAGGTGTGTGGAACAAAGGCTTATGTTGCTCAATCGCCATGGATACAGAGTGGAATGATAGAAGAAAATATACTCTTTGGCAGAGAGATGGATAGGGAAAAGTATGAGAGGGTGCTAGAAGCATGTTCATTGAAGAAAGACTTAGAGGTTTTACCATTTGGTGATCAGACCATTATTGGAGAGAAGGGAATCAATTTGAGTGGTGGACAGAAGCAAAGAGTACAAATAGCTCGTGCTCTTTACCAAGATGCTGATATATATCTGCTCGACGATCCCTTTAGTGCTGTTGATGCGCATACAGGATCCCATCTCTTTAAGGAGTGTTTGCTTGACCTTTTGAAAACAAAAACTGTGATATACATAACACATCAAGTAGAGTTCTTGCCTGATGCTGATCTGATACTGGTCATGAAAGATGGAAGGATAACTCAATCAGGAAAATACAATGACATACTTACGTCGGGAACAGATTTTATGGAACTTGTAGGTGCACATAGAGCAGCATTGTCTTCAGTGAAGTCCTTAGAGAGAAGGAATACATTTAAAGAATTGAGTATTACCGGGGAAGGCACAGGTTTATTAAGTGATTTTGAACTTGAGCAAGAAGTGGAAAACATAGATGAACGAAACGGCAAGTTAGATGACACAGTTGAGCCGAAAGGCCAACTTTTTCAAGATGAAGAACGGGAAAAGGGTATAATTGGACTTAAAGTGTTCTGGACATACATCACAATAGCTTATGGAGGAGCTCTAGTACCTTTTATATTTCTTTCACAGATACTCACTATGGTTTTACTGATTGCAAGCAATTATTGGATGGCATTGGCAACTCCTGTTTCAGCAACTGCTGAACCTGTAATTGGAAGCCTTACTCTTATGGTTGTCTATGTTTCTTTAGCAATTGGAAGTTCCTTTGCCACCCTTGCAAGAACAGTTCTTGCAGTGATATCTGGATACAAGACTGCCACCTTGCTCTTCAATCAAATGCATTTCAGCTTTATTCGAGCACCAATGTCTTTTTTTGATTCCACACCAAGTGGAAGAATTCTTAATAGAGCTTCAACAGACCAAAGTGCAATAGATATGAGCATTTCAAGTCTAGCATGGGGATTTACCTACCTTGTGGTTCAGCTCTTTGGATATGTTGCTGTGATGTCTCAAGCTGCATGGCAGGTGATTATAGTATTGATTCCTGTCATGGCAGCTAGCATATGGTACCAGCGATACTACTCTGCATCAGCACGCGAATTGGCACGATTAACTGGTATATGCCAAGCTCCAGTTATACAACATTTTTCTGAAACAATTTGTGGATCAACAACCATAAGAAGTTTTGAGCAAGAATCAAGATTTAATGAAATGAATATGCAATTGATAGACAAATATTCGCAACCTAAACTATACAGTGGTAGTGCAAAGGAATGGCTGAGTTTCAGATTGGATCTTTTATCCATTACAGTATTTGCGTCCTGCTTGGTTTTCTTGGTATCTTTTCCAAGTTCAATAACTAATGCTAGTATTGCGGGATTGGCTGTGACATATGGGATTAACCTAAGTGATACACAATCCGATTTAATTCGGTTTTTTTGCCAATTGGAGAACAAAATTATATCTGTAGAAAGAATACTTCAGTACACTTCCATCCCAAGTGAAGCACCTCTTGTAATAAAAGACAACCTACCAGATCATTCTTGGCCGTCATTCGGAGAGGTTCACATTCAGGATTTACAGGTTCGATATGCTCCTCACTTGCCTCTTGTTTTACGCGGACTAACATGCACTTTTACCGCTGGAGCAAAAACTGGCATTGTTGGAAGAACTGGAAGTGGAAAATCAACACTAGTGCAAACACTTTTCAGACTTATTGAACCTGTTGCAGGACAAATATTGATAGATAATATCAACATTTCATTGATTGGAATCCATGATTTAAGGTCAAGATTAAGCATAATTCCTCAGGATCCAACAATGTTTCAAGGGACAGTAAGAAGCAACCTTGACCCGCTCGAAGAGTACACAGATGAACAGATTTGGGAGGCTCTAGATATGTGCCAACTTGGAGATGAAGTGAGGAAGAAAGAAGGAAAGCTCGACTCCACAGTTACTGAGAATGGAGAAAATTGGAGCATGGGTCAAAGGCAATTGGTATGCCTCGGCCGTGTTCTACTTAAGAAAAGCAAGATCTTGGTGCTTGATGAAGCGACTGCATCAGTTGATACAGCTACAGATAATATAATTCAGCAGACAGTTAATCAACATTTCACTGATTGCACAGTTATTACCATTGCTCATAGAATAACTTCAATCCTCGATAGTGACATGGTTCTGTTTCTCAGCGAAGGGCTTATTGAAGAATATGATTCACCAAAGAAGCTGCTAAAGGACAAATCTTCATCCCTTGCTCAACTAGTTGCAGAATACACAAGGAGGTCAAACACTGGTTTTGGAAGTTGA | 3906 | 0.392 | MTKLGPLEESLLNGEASVNKDSDAKNTLKTCYSNAGFFSILTFSWMGPLITLGSKKTLDHEDLPLLSTNDSAYGTFSTFKKKLELECGNVRNLTTINLTKVLFFSNWQGILLSGFFAFLFVCASYVGPYLIDNFVQYLNDENKVKNEGYILAMTFVAANLIDSLCQKHFVFKIQQVGVRVQSMLVSMIYAKGLTLSCQSKAEHSGGEIINLLTVDAERIGDFCWYMHDIWVAVLQVSLALFILHRSVGVASVAAFAATVVVMLLNLPVASLQERFQGKLMEFKDKRMKATSEILMNMRILKLQTWEMKFLSKIIQIRKLEEIWLKKFLVGSAIVKFIFSNAPTFVAVVTFGTCVLIGIPLESGKILSALATFRILQNPIFCLPDTISVIVETKVSLDRIVAFLRLDDLQTDVVEKLPRSSSDVAIEIEDGNFTWDLSSVNTTLKNINIRVFHGMRVAVCGTVGSGKSSLLTCIIGEMPKLSGTLKVCGTKAYVAQSPWIQSGMIEENILFGREMDREKYERVLEACSLKKDLEVLPFGDQTIIGEKGINLSGGQKQRVQIARALYQDADIYLLDDPFSAVDAHTGSHLFKECLLDLLKTKTVIYITHQVEFLPDADLILVMKDGRITQSGKYNDILTSGTDFMELVGAHRAALSSVKSLERRNTFKELSITGEGTGLLSDFELEQEVENIDERNGKLDDTVEPKGQLFQDEEREKGIIGLKVFWTYITIAYGGALVPFIFLSQILTMVLLIASNYWMALATPVSATAEPVIGSLTLMVVYVSLAIGSSFATLARTVLAVISGYKTATLLFNQMHFSFIRAPMSFFDSTPSGRILNRASTDQSAIDMSISSLAWGFTYLVVQLFGYVAVMSQAAWQVIIVLIPVMAASIWYQRYYSASARELARLTGICQAPVIQHFSETICGSTTIRSFEQESRFNEMNMQLIDKYSQPKLYSGSAKEWLSFRLDLLSITVFASCLVFLVSFPSSITNASIAGLAVTYGINLSDTQSDLIRFFCQLENKIISVERILQYTSIPSEAPLVIKDNLPDHSWPSFGEVHIQDLQVRYAPHLPLVLRGLTCTFTAGAKTGIVGRTGSGKSTLVQTLFRLIEPVAGQILIDNINISLIGIHDLRSRLSIIPQDPTMFQGTVRSNLDPLEEYTDEQIWEALDMCQLGDEVRKKEGKLDSTVTENGENWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNIIQQTVNQHFTDCTVITIAHRITSILDSDMVLFLSEGLIEEYDSPKKLLKDKSSSLAQLVAEYTRRSNTGFGS* | 1302 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr7g3470 | 1301 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 425 | 648 | IPR003439 | GO:0005524 | |
Tpr7g3470 | 1301 | CDD | ABC_6TM_ABCC_D1 | 112 | 399 | IPR044746 | GO:0140359 | |
Tpr7g3470 | 1301 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 6 | 1300 | - | - | |
Tpr7g3470 | 1301 | CDD | ABC_6TM_ABCC_D2 | 736 | 1030 | IPR044726 | GO:0140359 | |
Tpr7g3470 | 1301 | CDD | ABCC_MRP_domain1 | 425 | 625 | - | - | |
Tpr7g3470 | 1301 | Pfam | ABC transporter | 443 | 577 | IPR003439 | GO:0005524 | |
Tpr7g3470 | 1301 | Pfam | ABC transporter | 1073 | 1220 | IPR003439 | GO:0005524 | |
Tpr7g3470 | 1301 | ProSitePatterns | ABC transporters family signature. | 550 | 564 | IPR017871 | GO:0005524 | |
Tpr7g3470 | 1301 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 111 | 391 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Tpr7g3470 | 1301 | Pfam | ABC transporter transmembrane region | 111 | 378 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Tpr7g3470 | 1301 | Pfam | ABC transporter transmembrane region | 738 | 981 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Tpr7g3470 | 1301 | Gene3D | - | 406 | 669 | IPR027417 | - | |
Tpr7g3470 | 1301 | Gene3D | ABC transporter type 1, transmembrane domain | 700 | 1036 | IPR036640 | GO:0005524|GO:0016021 | |
Tpr7g3470 | 1301 | Gene3D | - | 1039 | 1291 | IPR027417 | - | |
Tpr7g3470 | 1301 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1055 | 1289 | IPR003439 | GO:0005524 | |
Tpr7g3470 | 1301 | SUPERFAMILY | ABC transporter transmembrane region | 105 | 404 | IPR036640 | GO:0005524|GO:0016021 | |
Tpr7g3470 | 1301 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1049 | 1280 | IPR027417 | - | |
Tpr7g3470 | 1301 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 738 | 1018 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Tpr7g3470 | 1301 | PANTHER | ABC TRANSPORTER C FAMILY PROTEIN | 6 | 1300 | - | - | |
Tpr7g3470 | 1301 | Gene3D | ABC transporter type 1, transmembrane domain | 72 | 405 | IPR036640 | GO:0005524|GO:0016021 | |
Tpr7g3470 | 1301 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 421 | 647 | IPR027417 | - | |
Tpr7g3470 | 1301 | SUPERFAMILY | ABC transporter transmembrane region | 736 | 1037 | IPR036640 | GO:0005524|GO:0016021 | |
Tpr7g3470 | 1301 | CDD | ABCC_MRP_domain2 | 1053 | 1273 | - | - | |
Tpr7g3470 | 1301 | SMART | AAA_5 | 452 | 625 | IPR003593 | - | |
Tpr7g3470 | 1301 | SMART | AAA_5 | 1081 | 1273 | IPR003593 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr7g3470 | Tpr-Chr7 | 43058912 | 43068994 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr7g3470 | 425 | 671 | Calmodulin-binding Proteins | AT2G36910 | 28.090 | 1.53e-24 | 109 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr7g3470 | - | K05666 | gmx:106794105 | 1987.62 |