Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3470 ATGACTAAACTTGGCCCTCTTGAAGAGTCGCTTTTGAATGGTGAAGCTAGTGTAAACAAGGATTCTGATGCCAAAAACACACTAAAAACCTGTTATTCAAATGCTGGATTTTTCAGCATTCTTACTTTCTCATGGATGGGTCCACTAATAACTTTAGGAAGTAAAAAGACTTTAGACCATGAAGACCTCCCACTGCTTTCTACCAATGACAGTGCCTATGGAACTTTTTCTACTTTTAAGAAAAAGCTTGAGTTGGAGTGTGGTAATGTTAGGAATTTGACCACTATTAACCTCACCAAGGTGTTGTTCTTCTCAAATTGGCAAGGGATTCTTCTATCTGGCTTTTTTGCATTCTTGTTCGTATGTGCTTCTTATGTTGGACCCTACCTTATAGACAATTTTGTTCAATACCTCAATGATGAAAACAAGGTAAAAAATGAAGGCTATATTTTGGCTATGACGTTTGTTGCGGCAAATCTTATCGACTCTCTTTGTCAGAAGCACTTTGTGTTTAAGATCCAACAGGTTGGTGTTAGGGTGCAATCAATGTTGGTGTCAATGATCTATGCTAAAGGTTTGACTCTTTCGTGTCAATCGAAAGCGGAACACAGTGGTGGGGAAATCATCAACTTATTGACGGTTGATGCTGAAAGGATAGGTGACTTTTGTTGGTACATGCATGATATATGGGTGGCTGTACTGCAAGTTTCTTTGGCTTTGTTTATTCTTCATAGAAGTGTAGGGGTTGCTTCAGTAGCTGCTTTTGCCGCCACCGTAGTTGTGATGTTGCTAAACCTTCCTGTGGCATCATTGCAAGAGAGGTTCCAAGGTAAGTTAATGGAATTCAAAGATAAAAGAATGAAGGCGACATCTGAGATTCTAATGAACATGAGGATTCTTAAACTTCAAACATGGGAGATGAAATTCTTATCAAAGATTATTCAGATTAGGAAGTTAGAGGAGATTTGGCTAAAGAAATTTCTTGTTGGTTCAGCAATTGTTAAATTTATCTTCTCTAACGCCCCAACGTTTGTTGCTGTGGTTACTTTTGGTACTTGTGTTCTTATAGGCATTCCACTTGAATCAGGAAAGATCTTATCTGCACTTGCAACATTCAGAATTCTTCAAAATCCTATTTTTTGTCTTCCCGACACAATTTCAGTGATTGTAGAAACCAAGGTTTCTCTAGATAGGATTGTCGCGTTTCTTCGTCTAGATGATTTGCAGACCGATGTAGTGGAGAAGCTTCCACGCAGTAGTTCTGATGTAGCAATTGAGATAGAAGACGGAAATTTCACCTGGGATTTATCTTCTGTCAATACAACGTTGAAAAACATAAATATTAGAGTTTTTCATGGAATGAGGGTTGCCGTTTGTGGTACTGTTGGATCAGGAAAGTCTAGTTTACTTACTTGTATAATAGGGGAAATGCCAAAGCTATCTGGAACCTTGAAGGTGTGTGGAACAAAGGCTTATGTTGCTCAATCGCCATGGATACAGAGTGGAATGATAGAAGAAAATATACTCTTTGGCAGAGAGATGGATAGGGAAAAGTATGAGAGGGTGCTAGAAGCATGTTCATTGAAGAAAGACTTAGAGGTTTTACCATTTGGTGATCAGACCATTATTGGAGAGAAGGGAATCAATTTGAGTGGTGGACAGAAGCAAAGAGTACAAATAGCTCGTGCTCTTTACCAAGATGCTGATATATATCTGCTCGACGATCCCTTTAGTGCTGTTGATGCGCATACAGGATCCCATCTCTTTAAGGAGTGTTTGCTTGACCTTTTGAAAACAAAAACTGTGATATACATAACACATCAAGTAGAGTTCTTGCCTGATGCTGATCTGATACTGGTCATGAAAGATGGAAGGATAACTCAATCAGGAAAATACAATGACATACTTACGTCGGGAACAGATTTTATGGAACTTGTAGGTGCACATAGAGCAGCATTGTCTTCAGTGAAGTCCTTAGAGAGAAGGAATACATTTAAAGAATTGAGTATTACCGGGGAAGGCACAGGTTTATTAAGTGATTTTGAACTTGAGCAAGAAGTGGAAAACATAGATGAACGAAACGGCAAGTTAGATGACACAGTTGAGCCGAAAGGCCAACTTTTTCAAGATGAAGAACGGGAAAAGGGTATAATTGGACTTAAAGTGTTCTGGACATACATCACAATAGCTTATGGAGGAGCTCTAGTACCTTTTATATTTCTTTCACAGATACTCACTATGGTTTTACTGATTGCAAGCAATTATTGGATGGCATTGGCAACTCCTGTTTCAGCAACTGCTGAACCTGTAATTGGAAGCCTTACTCTTATGGTTGTCTATGTTTCTTTAGCAATTGGAAGTTCCTTTGCCACCCTTGCAAGAACAGTTCTTGCAGTGATATCTGGATACAAGACTGCCACCTTGCTCTTCAATCAAATGCATTTCAGCTTTATTCGAGCACCAATGTCTTTTTTTGATTCCACACCAAGTGGAAGAATTCTTAATAGAGCTTCAACAGACCAAAGTGCAATAGATATGAGCATTTCAAGTCTAGCATGGGGATTTACCTACCTTGTGGTTCAGCTCTTTGGATATGTTGCTGTGATGTCTCAAGCTGCATGGCAGGTGATTATAGTATTGATTCCTGTCATGGCAGCTAGCATATGGTACCAGCGATACTACTCTGCATCAGCACGCGAATTGGCACGATTAACTGGTATATGCCAAGCTCCAGTTATACAACATTTTTCTGAAACAATTTGTGGATCAACAACCATAAGAAGTTTTGAGCAAGAATCAAGATTTAATGAAATGAATATGCAATTGATAGACAAATATTCGCAACCTAAACTATACAGTGGTAGTGCAAAGGAATGGCTGAGTTTCAGATTGGATCTTTTATCCATTACAGTATTTGCGTCCTGCTTGGTTTTCTTGGTATCTTTTCCAAGTTCAATAACTAATGCTAGTATTGCGGGATTGGCTGTGACATATGGGATTAACCTAAGTGATACACAATCCGATTTAATTCGGTTTTTTTGCCAATTGGAGAACAAAATTATATCTGTAGAAAGAATACTTCAGTACACTTCCATCCCAAGTGAAGCACCTCTTGTAATAAAAGACAACCTACCAGATCATTCTTGGCCGTCATTCGGAGAGGTTCACATTCAGGATTTACAGGTTCGATATGCTCCTCACTTGCCTCTTGTTTTACGCGGACTAACATGCACTTTTACCGCTGGAGCAAAAACTGGCATTGTTGGAAGAACTGGAAGTGGAAAATCAACACTAGTGCAAACACTTTTCAGACTTATTGAACCTGTTGCAGGACAAATATTGATAGATAATATCAACATTTCATTGATTGGAATCCATGATTTAAGGTCAAGATTAAGCATAATTCCTCAGGATCCAACAATGTTTCAAGGGACAGTAAGAAGCAACCTTGACCCGCTCGAAGAGTACACAGATGAACAGATTTGGGAGGCTCTAGATATGTGCCAACTTGGAGATGAAGTGAGGAAGAAAGAAGGAAAGCTCGACTCCACAGTTACTGAGAATGGAGAAAATTGGAGCATGGGTCAAAGGCAATTGGTATGCCTCGGCCGTGTTCTACTTAAGAAAAGCAAGATCTTGGTGCTTGATGAAGCGACTGCATCAGTTGATACAGCTACAGATAATATAATTCAGCAGACAGTTAATCAACATTTCACTGATTGCACAGTTATTACCATTGCTCATAGAATAACTTCAATCCTCGATAGTGACATGGTTCTGTTTCTCAGCGAAGGGCTTATTGAAGAATATGATTCACCAAAGAAGCTGCTAAAGGACAAATCTTCATCCCTTGCTCAACTAGTTGCAGAATACACAAGGAGGTCAAACACTGGTTTTGGAAGTTGA 3906 0.392 MTKLGPLEESLLNGEASVNKDSDAKNTLKTCYSNAGFFSILTFSWMGPLITLGSKKTLDHEDLPLLSTNDSAYGTFSTFKKKLELECGNVRNLTTINLTKVLFFSNWQGILLSGFFAFLFVCASYVGPYLIDNFVQYLNDENKVKNEGYILAMTFVAANLIDSLCQKHFVFKIQQVGVRVQSMLVSMIYAKGLTLSCQSKAEHSGGEIINLLTVDAERIGDFCWYMHDIWVAVLQVSLALFILHRSVGVASVAAFAATVVVMLLNLPVASLQERFQGKLMEFKDKRMKATSEILMNMRILKLQTWEMKFLSKIIQIRKLEEIWLKKFLVGSAIVKFIFSNAPTFVAVVTFGTCVLIGIPLESGKILSALATFRILQNPIFCLPDTISVIVETKVSLDRIVAFLRLDDLQTDVVEKLPRSSSDVAIEIEDGNFTWDLSSVNTTLKNINIRVFHGMRVAVCGTVGSGKSSLLTCIIGEMPKLSGTLKVCGTKAYVAQSPWIQSGMIEENILFGREMDREKYERVLEACSLKKDLEVLPFGDQTIIGEKGINLSGGQKQRVQIARALYQDADIYLLDDPFSAVDAHTGSHLFKECLLDLLKTKTVIYITHQVEFLPDADLILVMKDGRITQSGKYNDILTSGTDFMELVGAHRAALSSVKSLERRNTFKELSITGEGTGLLSDFELEQEVENIDERNGKLDDTVEPKGQLFQDEEREKGIIGLKVFWTYITIAYGGALVPFIFLSQILTMVLLIASNYWMALATPVSATAEPVIGSLTLMVVYVSLAIGSSFATLARTVLAVISGYKTATLLFNQMHFSFIRAPMSFFDSTPSGRILNRASTDQSAIDMSISSLAWGFTYLVVQLFGYVAVMSQAAWQVIIVLIPVMAASIWYQRYYSASARELARLTGICQAPVIQHFSETICGSTTIRSFEQESRFNEMNMQLIDKYSQPKLYSGSAKEWLSFRLDLLSITVFASCLVFLVSFPSSITNASIAGLAVTYGINLSDTQSDLIRFFCQLENKIISVERILQYTSIPSEAPLVIKDNLPDHSWPSFGEVHIQDLQVRYAPHLPLVLRGLTCTFTAGAKTGIVGRTGSGKSTLVQTLFRLIEPVAGQILIDNINISLIGIHDLRSRLSIIPQDPTMFQGTVRSNLDPLEEYTDEQIWEALDMCQLGDEVRKKEGKLDSTVTENGENWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNIIQQTVNQHFTDCTVITIAHRITSILDSDMVLFLSEGLIEEYDSPKKLLKDKSSSLAQLVAEYTRRSNTGFGS* 1302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3470 1301 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 425 648 IPR003439 GO:0005524
Tpr7g3470 1301 CDD ABC_6TM_ABCC_D1 112 399 IPR044746 GO:0140359
Tpr7g3470 1301 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 6 1300 - -
Tpr7g3470 1301 CDD ABC_6TM_ABCC_D2 736 1030 IPR044726 GO:0140359
Tpr7g3470 1301 CDD ABCC_MRP_domain1 425 625 - -
Tpr7g3470 1301 Pfam ABC transporter 443 577 IPR003439 GO:0005524
Tpr7g3470 1301 Pfam ABC transporter 1073 1220 IPR003439 GO:0005524
Tpr7g3470 1301 ProSitePatterns ABC transporters family signature. 550 564 IPR017871 GO:0005524
Tpr7g3470 1301 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 111 391 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr7g3470 1301 Pfam ABC transporter transmembrane region 111 378 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr7g3470 1301 Pfam ABC transporter transmembrane region 738 981 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr7g3470 1301 Gene3D - 406 669 IPR027417 -
Tpr7g3470 1301 Gene3D ABC transporter type 1, transmembrane domain 700 1036 IPR036640 GO:0005524|GO:0016021
Tpr7g3470 1301 Gene3D - 1039 1291 IPR027417 -
Tpr7g3470 1301 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1055 1289 IPR003439 GO:0005524
Tpr7g3470 1301 SUPERFAMILY ABC transporter transmembrane region 105 404 IPR036640 GO:0005524|GO:0016021
Tpr7g3470 1301 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1049 1280 IPR027417 -
Tpr7g3470 1301 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 738 1018 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr7g3470 1301 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 6 1300 - -
Tpr7g3470 1301 Gene3D ABC transporter type 1, transmembrane domain 72 405 IPR036640 GO:0005524|GO:0016021
Tpr7g3470 1301 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 421 647 IPR027417 -
Tpr7g3470 1301 SUPERFAMILY ABC transporter transmembrane region 736 1037 IPR036640 GO:0005524|GO:0016021
Tpr7g3470 1301 CDD ABCC_MRP_domain2 1053 1273 - -
Tpr7g3470 1301 SMART AAA_5 452 625 IPR003593 -
Tpr7g3470 1301 SMART AAA_5 1081 1273 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3470 Tpr-Chr7 43058912 43068994 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3470 425 671 Calmodulin-binding Proteins AT2G36910 28.090 1.53e-24 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3470 - K05666 gmx:106794105 1987.62