Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3468 ATGCACACAAACACAACAATGGGATCATCTTTCAATCCCATCTCATGCAACAGAAAAACTTCATACAGATTAGAAACCAAAAACTTATCCTACAGATTAAGCAGCCAACTTGATGAACTTAGAACTCTTTGTTTCGGTTTGAATCCTCAGAGAGGTTCAAAGTTCATTTTGAAGGATGTAAATTGTGAGGCAAGGCCAGGGGAGGTTACTGCTATTGCTGGTCCTAGTGGAGCTGGAAAAACAACACTGCTTGAAATTCTTGCTGGGAGAATACCCTCATGTAAAGTTTTGGGACAAGTACTTGTCAATCACATGCCTATGGATGTAAATAGATTCAGAAGAGAATCCGGCTACGTCACACAAGAAGATGCTTTGTTTCCATCACTTACGGTTAGAGAGACGCTCATGTATAGTGCTTTGTTGAGGCTTCCCGGGGGACGAAAAGCAGCTGCTATGAGAGTTGCAGAGTTGATGAAGGAGCTTGGGTTGGATACTATTGCAGATTCAAGAATTGGCAATGGATCAGACCATGGTATATCGGGCGGGGAAAAGCGTAGAGTTTCTATTGGTGTTGACTTGGTTCATGACCCTGCAATTATTTTGATTGATGAACCAACTTCAGGCTTGGATTCAGCATCAGCTCTTAAAGTAATCTCATTGCTTAGATTAATGGCATTTAATCAAGGTAAGACGGTTGTTTTAACTATCCACCAACCCGGTTTCCGAATCTTAGAGCTACTTGATAGCCTCATTTTGCTATCTGATGGATTTGTCATGCATAATGGTTCATTGAATCTACTCGAGGCAAGGCTCAATTTATCCGGTCACCGCATTCCCAACCATGTCAATGTCCTAGAATTCGCTCTTGAAGCCATGCAAACCTTGGTTATACATACTTCAGAATCTGGGAACAATCAATTTCTTCTCAATGACAAAAATCACCAAGATCACAATATGATGATGCAGTGCTCTATGATTGTCAAAGAAAAGGCTATTTCGTACTCAAATTCTCCAATGGAAGAGATTTTAATCCTAGGACAAAGATTTTGCAGCAACATATTCAGAACCAAGCAACTCTTTGTTACAAGGGTCATACAGGCCTTAGTAGCTGGATTTGTATTGGGGACCATATTCTTGAATGTTGGCAACAAACAAAGTAAAATAGCATTACAAACGCGAAGCGGCTTCTTCGCTTTCAGCCTTACCTTTTTGTTATCATCAACAACAGAAGGGTTACCTATTTTCTTAGAGGAGAGAAGAACTTTTATGAGAGAGACCTCAAGAGGAGCTTATAGAGTTTCTTCATATGTTTTAGCAAATACACTTGTGTTTCTTCCTTTTCTTCTACTGGTTGGTCTTCTATATACTACTCCAGTTTATTGGCTAGTAGGATTACGGAAAGACATTGATGGTTTCCTTTACTTCTCCTTAGTGGTTTGGTTGGTCCTATTAATGTCGAATTCTCTCGTGGCTTGTTTCAGCGCCCTAGTGCCGAATTTCATCCTTGGAAGCTCGGTGATTGCCGGTCTAATGGGGTCATTCTTTCTGTTCTCAGGGTATTTCATATCGAAGGAAAAAATACCTAGTTACTGGATTTTTATGCACTACATAAGTCTATTCAAGTATCCATTTGAGTGCCTTATGATAAATGAGTATGGAGGCGAGCAAGGGAAAAGGAGATGCATAGAGGTTAACAACAATGGTGAATGCATATTATATGGAGCTGAGTTCTTAAAACAACAGGGTCTCAAAGAGTCACACAAGTGGATCAATTTGGCTTTAATGTTAAGCTTCATAATAGGGTATAGAGTGCTTAACTTTATAATTCTTTGGTCTAGATGTTACAAAAGTAGAAAATAA 1860 0.3952 MHTNTTMGSSFNPISCNRKTSYRLETKNLSYRLSSQLDELRTLCFGLNPQRGSKFILKDVNCEARPGEVTAIAGPSGAGKTTLLEILAGRIPSCKVLGQVLVNHMPMDVNRFRRESGYVTQEDALFPSLTVRETLMYSALLRLPGGRKAAAMRVAELMKELGLDTIADSRIGNGSDHGISGGEKRRVSIGVDLVHDPAIILIDEPTSGLDSASALKVISLLRLMAFNQGKTVVLTIHQPGFRILELLDSLILLSDGFVMHNGSLNLLEARLNLSGHRIPNHVNVLEFALEAMQTLVIHTSESGNNQFLLNDKNHQDHNMMMQCSMIVKEKAISYSNSPMEEILILGQRFCSNIFRTKQLFVTRVIQALVAGFVLGTIFLNVGNKQSKIALQTRSGFFAFSLTFLLSSTTEGLPIFLEERRTFMRETSRGAYRVSSYVLANTLVFLPFLLLVGLLYTTPVYWLVGLRKDIDGFLYFSLVVWLVLLMSNSLVACFSALVPNFILGSSVIAGLMGSFFLFSGYFISKEKIPSYWIFMHYISLFKYPFECLMINEYGGEQGKRRCIEVNNNGECILYGAEFLKQQGLKESHKWINLALMLSFIIGYRVLNFIILWSRCYKSRK* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3468 619 Pfam ABC transporter 57 207 IPR003439 GO:0005524
Tpr7g3468 619 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 270 IPR027417 -
Tpr7g3468 619 ProSitePatterns ABC transporters family signature. 179 193 IPR017871 GO:0005524
Tpr7g3468 619 Gene3D - 18 282 IPR027417 -
Tpr7g3468 619 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 12 611 - -
Tpr7g3468 619 PANTHER ABC TRANSPORTER G FAMILY MEMBER 10 12 611 - -
Tpr7g3468 619 SMART AAA_5 66 257 IPR003593 -
Tpr7g3468 619 Pfam ABC-2 type transporter 341 552 IPR013525 GO:0016020|GO:0140359
Tpr7g3468 619 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 24 280 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3468 Tpr-Chr7 43041964 43043823 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3468 37 267 Calmodulin-binding Proteins AT2G36910 28.033 2.49e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3468 K05681 - gmx:100776372 1000.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3468 7 43041964 43043823 Tpr7g3468 7 43041964 43043823 ECH