Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3449 ATGTTCGATACCAAGCCAATTGTATCGGCAATGGCCTCAATTGTGTTAATGAGGACCATCACAAATGAACTCATTCCTCATGAGGTCCTAAACATTTTTCAATCTGCACTTCATCATCTTTCTCGCCATTTCTCGGCGCAATTCACCATAGTTATTGAAGAATTTCAAGGAAGGGCAAGAAACCAAGTTTTTGAGGCTGCACAAATCTACCTAGGAACTAAAGCAACTGTGTCCGTAGAACGAGTTAAAGTCAACAAATCAGAGGATCATAAAAATCTTTCATTCAATATAGATAAAAATGAAGAAGTGAGTGATAATTTTGAAGGTATTAGTGTAAAGTGGAAACTAATTTGCATAGAAGTTGACTCGTCACGGATTCAACATTCCGATTACGACTCCTCGCCCCTGTCAGAAATACGATCCTATGAGCTAACTTTTCACAAGAAACACAAAAACAAGATCTTCGATTCGTATTTACCTTATGTGATGGATATAGCGAAAAAAATTAAACAAGGAGACATGGCAATCAAAATTCATTCAAATTACTATGATAGTTGGTCTTCTGAACCTCCTAAGTTCAACCATCCAATGAGTTTCAACACTCTTGCAATTGATGAAGAGCTTCAAAGGGAAATTGTGGATGATTTGGACAAATTTGTGAGAGCTAGAGAGTTTTATAGAAGAACCGGGAAAGCTTGGAAACGCGGTTACTTGTTGTATGGTCCTCCTGGTACCGGAAAATCAAGCTTGATTGCAGCGATGGCTAACTATCTCAACTATGATATCTATGACTTGGATCTCACCACGGTTGGCGATAATAGGGGCTTGAGGGAAATGATTCTAGGCATGTCAAACCGTTCAATACTCGTGATCGAGGATATTGATTGCACTATTAATTTGCAGAATCGAGAAGATGAAGAAGTGGTTAATAATGAACACAATAAGGTAACACTTTCTGGATTATTGAATGCTGTAGATGGTCTTTGGTCATGCTGTAAAGAGGAACACATAATTGTTTTCACAACAAATCATAAAGAAAGACTTGATCCTGCTCTTCTAAGGCCTGGTAGAATGGATAAGCAAATTCACTTATCATATTGCAACTTTTCAGCTTTTAAGCAATTAGCCACCAACTACCTTTGCATTACTGAACATGAACTCTATGAAAAGATTGAAGTGCTTCTAGGAGAAGTTAAAATTACTCCAGCTGAAATTGCTGAAGAGCTTACAAAGGATGCTGATGCTACAGAGTGTCTACAAGACCTTATCAACTTCCTTCAAGCCAAGAAAATGATCATGGTAGAGAGAATTAAAAGAGTGAAGAAAATATCAAAGAAGAACATAATAATCAAGAGCATAAGTAAACAAAGAAGAGATTAA 1380 0.371 MFDTKPIVSAMASIVLMRTITNELIPHEVLNIFQSALHHLSRHFSAQFTIVIEEFQGRARNQVFEAAQIYLGTKATVSVERVKVNKSEDHKNLSFNIDKNEEVSDNFEGISVKWKLICIEVDSSRIQHSDYDSSPLSEIRSYELTFHKKHKNKIFDSYLPYVMDIAKKIKQGDMAIKIHSNYYDSWSSEPPKFNHPMSFNTLAIDEELQREIVDDLDKFVRAREFYRRTGKAWKRGYLLYGPPGTGKSSLIAAMANYLNYDIYDLDLTTVGDNRGLREMILGMSNRSILVIEDIDCTINLQNREDEEVVNNEHNKVTLSGLLNAVDGLWSCCKEEHIIVFTTNHKERLDPALLRPGRMDKQIHLSYCNFSAFKQLATNYLCITEHELYEKIEVLLGEVKITPAEIAEELTKDADATECLQDLINFLQAKKMIMVERIKRVKKISKKNIIIKSISKQRRD* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3449 459 PANTHER BCS1 AAA-TYPE ATPASE 4 439 - -
Tpr7g3449 459 Gene3D - 192 362 IPR027417 -
Tpr7g3449 459 PANTHER NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 4 439 - -
Tpr7g3449 459 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 409 IPR027417 -
Tpr7g3449 459 Gene3D - 363 432 - -
Tpr7g3449 459 Pfam ATPase family associated with various cellular activities (AAA) 238 365 IPR003959 GO:0005524|GO:0016887
Tpr7g3449 459 CDD AAA 234 366 - -
Tpr7g3449 459 SMART AAA_5 233 368 IPR003593 -
Tpr7g3449 459 Pfam Domain associated at C-terminal with AAA 25 117 IPR025753 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3449 Tpr-Chr7 42776992 42779616 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3449 189 368 Calmodulin-binding Proteins AT3G56690 24.468 4.70e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3449 K08900 - gmx:100778503 578.556