Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3445 ATGGAAATTGATGGATCTAAAGAAATTTTTCTTGGTCAAGTTGTGAATAATAAGGATGAGGCCTACGACTTGTATCAAGAACATGCCTTCAAAATGGGTTTTAGCGTACGTAAGGGGAGGGAGTTATATTATGATAATGAGAAGAAACAAACACGCTCAAAAGAATATTATTGTTCTAAACAAGGGTTTAAGAACAACAAACTCGAAGGTGAAGTGTCTTATGAGAGAGCAGATTCAAGAACAAATTGTAATGCTATGGTGAAATTTAATGTGAGCAAGGAAGGTTTATATACAATAACCAAGTTGGTATTGAATCACAATCATGAGTTTGTACCTCCTGAGCAAAGACATATGCTACGTTCTATGAGAAATTTGTCAAATGCCAAAGGTGATGTCATAAAGTCCATGGTGAATTCTGGTATGAAAGTTACAAATGTTTGGAGTTATCTTGGTGAAGAAGTTGGAGGATTTAATAATCTTGGTATAACTTTGAAAGATATGCACAATTATGTCTACACAGAAAAGTTGAAGTCAATTGAAGCTGGTGATGCTCAAGCTTTAGTTAACCATTTACAAAATAGACAAGCACAAGATATCATGTTCTACTACAGTGTGCAGTTAGATCAGGAATCACGTTTGACCAATGTCTTTTGGAGAGATGGTAAATCTAAAATTGATTATGACTGTTTTGGAGATGTTGTTGTTTTTGATACTACTTATCGTACTAATAAATACAATTTGATTTGTGCTCCATTTGTTGGTGTAAACCATCATTGGCAAAATGTCATGTTTGGTTGTGCCTTTTTATTTGATGAAACCGCCACTTCTTTTACTTGGTTGTTCAAGGTGTTTTTGGAGAGTATGGAAAACAATCAACCAAAAACTATCTTTACGGATCAAGATTCAGCTATGGCAAAAGCAATTAAAGAGGTAATGCCAAATGCATGTCATCGATTATGTTTGTGGCATATAGCTAAAAATGCTCCTTCACATTTAGGATCTCTCAAATCTAATCCGAAATTTCAAAGCTTGCTTAATAAATGCATGACTGGTTGTGATTCCGAAGAAGAATTCCAAAACACTTGGGATGGAATGCTAAAAGAGTTTGACCTTCATGACCATCCATGGTTAAGTAACATGTACAAAATTCGTCATAAGTGGAGCACTGCATATAGTAATAATGTATTCTCTGCTGGTATCAAGTCTTCTCAAAGGAGTGAGAGTACAAACAGTGTATTGGGTAATATTGCAGGGAAAACAACAAGTCTCACTGATTTTTTAGTAGCATTTGAGAAGATGGTGAAAAAGTGGCGACAATTAGAAGTTGAGAAAGAATTCAAAAATAGCCAAAGTGCACCCCCTCGTGTGATAAATATCAGTGAAACTTTACGACATGCATCTAAGATATATACTCACAAAATCTTCAAATTTTTTTTGAAAGAATATCTTGATGGAACAGGTGGAAGCACTTCTATAGAGATTGGTCAACGTGATAATGTGTCATATCATGAAGTGATATTTAACCATGTGTCCAATAAAAAATATATGGTGACTTTAGACTCCTCCACCGGGATGATCAGTTGCAGCTGCCACAAGTTTGATTCCATGGGCATTCTTTGTAGTCATGCTTTGCGAATTTATAACATTAAAGGTATTTTAAAAATACCTGACAATTACTTCTTAAGAAGATGGTCGAAAAATGCAAGGTCTCAAATTTATGAGCAAAGGAGTTCTGAAGAAGACTCTACCTCCAATTCAATGATCAATGGTGATGACGCTGGTATTCTTTACCGCAATGCTATTATGAAATCATTTTACAATCTAGTTTTGGAGTCTCAAGACCACAAAGAAGCTCAACAAATCATGTGGGAATTGCTCAATATGGGATTTGAGAGGGTTCGACAGTGTATTGGCAAGTCTAATTCAAAATCAAATGCAGAAACCACAAAGAACAATTTCATGCAAAATGAAGAAAATGAATGTGCTCCAATTTGTAATCCGCCTTTAGCAAAGACTAAAGGAATGTCTGATACTCGCAAGAAAGGACATTTTGAGAAAAGAAAGCGAACAACGACAAAAGCAAAAAAACAAAATAAAGAGAAACAAAATGAAGACATTTTGGGTGGTACGAATAATCATGTGAGGGAGCCAATGTTTTAG 2160 0.3514 MEIDGSKEIFLGQVVNNKDEAYDLYQEHAFKMGFSVRKGRELYYDNEKKQTRSKEYYCSKQGFKNNKLEGEVSYERADSRTNCNAMVKFNVSKEGLYTITKLVLNHNHEFVPPEQRHMLRSMRNLSNAKGDVIKSMVNSGMKVTNVWSYLGEEVGGFNNLGITLKDMHNYVYTEKLKSIEAGDAQALVNHLQNRQAQDIMFYYSVQLDQESRLTNVFWRDGKSKIDYDCFGDVVVFDTTYRTNKYNLICAPFVGVNHHWQNVMFGCAFLFDETATSFTWLFKVFLESMENNQPKTIFTDQDSAMAKAIKEVMPNACHRLCLWHIAKNAPSHLGSLKSNPKFQSLLNKCMTGCDSEEEFQNTWDGMLKEFDLHDHPWLSNMYKIRHKWSTAYSNNVFSAGIKSSQRSESTNSVLGNIAGKTTSLTDFLVAFEKMVKKWRQLEVEKEFKNSQSAPPRVINISETLRHASKIYTHKIFKFFLKEYLDGTGGSTSIEIGQRDNVSYHEVIFNHVSNKKYMVTLDSSTGMISCSCHKFDSMGILCSHALRIYNIKGILKIPDNYFLRRWSKNARSQIYEQRSSEEDSTSNSMINGDDAGILYRNAIMKSFYNLVLESQDHKEAQQIMWELLNMGFERVRQCIGKSNSKSNAETTKNNFMQNEENECAPICNPPLAKTKGMSDTRKKGHFEKRKRTTTKAKKQNKEKQNEDILGGTNNHVREPMF* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3445 719 Pfam MULE transposase domain 233 327 IPR018289 -
Tpr7g3445 719 PANTHER OS12G0160900 PROTEIN 8 648 - -
Tpr7g3445 719 Pfam FAR1 DNA-binding domain 24 112 IPR004330 -
Tpr7g3445 719 SMART 26again6 526 553 IPR006564 GO:0008270
Tpr7g3445 719 ProSiteProfiles Zinc finger SWIM-type profile. 515 551 IPR007527 GO:0008270
Tpr7g3445 719 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 8 648 IPR031052 GO:0006355
Tpr7g3445 719 MobiDBLite consensus disorder prediction 672 719 - -
Tpr7g3445 719 Pfam SWIM zinc finger 517 546 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3445 Tpr-Chr7 42695059 42697325 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr7g3445 MULE 4.5e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3445 - - lja:Lj4g3v2120630.1 1052.35