Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3435 ATGAAGGATTTTTGGAGCATAATATGTGGGGATTCTAGCTGTTCAAAGACTAATGGAAATCCTTTCTGTTATGATTTCAAGAGTTTGAAAGATCCTTCTTCATGCAATAACCATTTGTTGGTAATTTTCTTTGATCTGATCATGCTGATCATGCTGTCATTTATGATGTTCCTGAAGTCTTCGTCGAGACCCTTTTGGAGTCGGGTAAGATATTCAAACGTGCAACTAGTTTCTGCCATAACCAATGCTTTTATTGGGTTGTCGCATTTATGCTTAGGAATTTGGATTTTTGAGGAGATATTGAGGAAAACCTTCAAATCAGTTCCTCTTAATTTGTCGTTGCTAGAACTCTTTCATGGACTAACATGGTTGTTAGTAAGTTTAACTATAAGTCTTCGGATAAAACAACTTCCAAGAGCGTGGTTGTGGCTGTTTTCTATTCTTGTGTTCTTTGCTTCTGGTACACTATGTGTTTTATCCATGTCTTATGCAATTGGAAGAAGAGAATTGTCCGTCAAGGAAGCTTTAGATGTTATATCTTTTCCAGGGTCAACTTTGCTTCTGTTATGTACTTACGAAGCAGGTAAACGTGAAGATTGCAATGCAGACCGAGAAAATGCTGAAAGGCTTTATGCTCCCTTAAATAGCGAGTTCAACGATGTTTCTCAATATCATGTCACCCCATTTGCTGAAGCTGGATTCTTTAGTAAGATATCGTTTTGGTTGTTGAATCCATTGATTAAAAAGGGTCAAGAAAAAACACTTCAGGACGAGGATATCCCAAAGTTAAGAGAGTCTGAACAAGCGGAAAGTTGTTATTTGTCATTTGTAGAACAATTAAGGATACAAAGAGAAAAAGAACCATCATCACATTCATCGGTATTATGGACAATAACAATGTGCCACCGAAGAGAGATTTTGATAACAGGATTCTTTGCTTTGCTCAAGGTACTTGCTATATCTTGTGGCCCTCTACTTCTGAATGCTTTTATATTGGTTTCTGAGGGTAATGAAAGTTTCAAATATGAAGGATATATATTGGCCATATCACTCTTCTTCGAAAAGATCATAGAATCCCTATCACAAAGACAGTGGTATTTTCGCAGTAGAATTGTTGGGATGAAAGTCAGGTCACTAATTACGGCAAAAATTTATAAAAAAACATTAAGGTTATCCAATTCTGCTAGATTGGTTCACTCCAGCGGTGAGATAATGAATTATATGACTGTGGATGCTTATAGAATTGGAGAATTTCCATTTTGGTTTCATAGGACTTGGACAGCAATTCTCCAACTGTCTATTGCAATAATAATTCTTTTCCGTGCAATTGGAATAGCAACACTAGCATCATTATTGGTCATAGTTCTAACCGTGTTTTGCAACGCTCCACTGGCAAAGTTGCATCACAAGTTTCATAGCAAACTTATGATGGCACAAGATGAGAGATTAAAGGCTAGTTCTGAGGCTCTTGTGAATATGAAAGTGCTAAAGCTATATGCATGGGAAACTCATTTTAAAAATGCAATAGAAAAGTTAAGAAGTGTCGAACTCAAACTGTTATTTGCGGTGCTATTAAGAAAGACATATGCTGTCTTTCTCTTTTGGACCTCACCAGTTATGGTATCTGCTGCATCTTTCGTAGCATGTTACCTGCTGAAAATTCCTTTGCATGCAAGTAATGTTTTCACTTTCGTAGCAACTTTACGCCTTGTTCAAGAGCTAATTACAAGCATCCCGGATGTTATTGCAGTAATCATTCAAGCAAAAGTTGCATTTGCTCGGATTCGTAACTTTCTTGAGACACAAGAACTGCATAGTTCAAATTTCAATAGCAGGGACTTTAATGACAACCTCAAAGGCTCAGTTGTAATGAAATATGCAGACTTTTCATGGGAAGATAATGCATCAAAGCCAACACTAAGAAACATAAATTTGGATGTTAGACATGGACAAAAGGTGGCTATTTGCGGAGAAGTTGGCTCAGGAAAATCAACCCTCTTAGCAACAATTCTTGGAGAAGTTCCGAATACAAAGGGAACGATCGATGTATATGGGAAGTTTGCATATGTTTCTCAAACAGCATGGATACAAACAGGTACAATACGGGAAAATATTTTGTTTGGATCTGAATTCGATGATCAAAGATATCAAGAAACACTTCAAAAGTCATCACTGATAAAGGACCTTGAGTTGCTTCCCTATGGTGACCTCACCGACATAGGTGAGAGAGGAGTTAATTTAAGTGGAGGTCAAAAGCAACGAATTCAACTTGCTCGAGCTCTTTATGAGAATGCTGATATATATCTATTGGATGATCCATTTAGTGCTGTTGATGCACATACTGCAAAAAGTTTGTTTAATGAATACATCATGGAAGGACTCAAAGGGAAAACTGTCTTACTCGTCACTCATCAAGTTGACTTTCTCCCAGCATTTCATTCTGTTTTGTTAATGTCAGATGGGGTAATCCTACAAGCTGGTCCATATCACCACCTAATGACCAAAAGCGAAGAATTCCAAGACCTTGTCAATGCGCACAAGGTTACTGCCCGTTCAAACCAGCTCGTGAATGTTACGTTTTCTCAAGCTTCTCAAAATATTGCTCAAGCTTTAGTGGAAAAGCAGTGTAAAGAAGCAAATGGAAATCAATTAATTAAGCAAGAAGAAAGAGAGATAGGAGACACAGGGTTCAAGCCTTACTTACAATATCTGAATACGATGAAAGGCTATATTTTCTTCTCCGTGTCTACATTCTGTCACATTTTTTTTGTGGTCTCTCAGATACTGCAAAACTCATGGATGGCTGCAAATGTAGACAATCCCCATGTCGCCACGTTGCAATTGGTTTTAGTTTATTTCTATATCGGAGCTTCATCGATATTTTTCATGTTGATCAGAAGTCTATTTGTAGTTTCGTTGGGTCTTCATTCTTCAAAATATTTATTTTTACAGTTGATGAACTCTCTCTTTCGAGCACCGATGTCTTTCTATGATTCTACGCCATTAGGAAGGATACTAAGTAGGGTCTCATCTGATCTGAGCATTATGGATCTTGACATGCCATTTAGCCTCCTTTTTTCCGTCGGATCTACTATAAACTTTTATGCTTGTCTTATAGTTTTATCAGTTGTCACTTGGCAAGTGTTGATTATTGTTATACCAATGGTATATGCTACAATTCTTTTACAGAGATACTACTTAGTCTCAGAAAAACAAATGATGCGGATGAGCGGCACAACAAAATCCTGTTTAGCTAATCATGTAGCTGAAACTGTTGCTGGCGCCGTGACAATAAGGGCTTTTGAGGAAGAAGATCGATTTTTTAAGAAGAATCTTGATCTAATTGATATGAATGCCAGTACATTTTTTCACTGTTTTGCCTCAAATGAATGGTTGACGCAACGACTAGAAACAATAAGCGCACTTGTTCTTTCCTCTGCAGCACTTTGCATGGTTATACTTCCACCAGGGACTTTCACCTCTGGATTTATCGGTCTATCTCTATCTTATGGCCTTTCACTAAATGCTTCCTTAGTAATTTCAGTTGGATTTCAATGCCGTCTCGCAGATAATATAATATCAGTAGAGAGGCTAAATCAATATATGCATATACAAAGTGAGGCAAAAGAAATAATAGAAGGTAATCGTCCTCCTTTGAATTGGCCAGTTGCAGGCAAAGTTGAAATAAATGACTTGAAGATACGATACAGACCCGATGGACCACTTGTACTACATGGGATCACATGCACATTTGAAGCTGGTCACAAGATTGGTATTGTTGGAAGAACAGGCTGTGGGAAATCAACTCTTATTGGTGCTTTATTTCGTCTCGTGGAACCAGAAGGAGGAAAAGTTGTAGTTGACGGCATAGACATTTCATCTATTGGTCTTCATGATTTGAGGTCACGTTTAGGGATTATACCTCAGGATCCTACCCTTTTTAATGGAACAGTGAGATTTAATATGGACCCTTTATCTCAACACACTGATCAAGAGATATGGGAGGTTCTCGGGAAATGCCAACTACGAGAGGTTGTCCAAAGGAAAGAAGAGGGTTTAAACTCCTCAGTTGTCGACGATGGATCAAACTGGAGCATGGGACAAAGGCAGTTATTTTGTTTGGGGCGTGCTCTATTAAGGAGAAGTAGGATATTGGTACTTGATGAAGCAACTGCATCAATTGACAACTCAACTGATTTGATTCTACAGAAAACCATTAGAACCGAGTTTGCGGATTGTTCAGTGATCACAGTAGCACACAGGATACCGACTGTGATGGATTGCACTATGGTTCTTTCAATAAGTGATGGAAAATTGGTGGAGTATGATGAACCGATGACCTTGATGAAGAGAGAAGAATCGTTGTTCAGGAAGCTTGTCAAGGAATACTGGTCTCATTTTCAGTCTGCAGAATCACATTGA 4422 0.3817 MKDFWSIICGDSSCSKTNGNPFCYDFKSLKDPSSCNNHLLVIFFDLIMLIMLSFMMFLKSSSRPFWSRVRYSNVQLVSAITNAFIGLSHLCLGIWIFEEILRKTFKSVPLNLSLLELFHGLTWLLVSLTISLRIKQLPRAWLWLFSILVFFASGTLCVLSMSYAIGRRELSVKEALDVISFPGSTLLLLCTYEAGKREDCNADRENAERLYAPLNSEFNDVSQYHVTPFAEAGFFSKISFWLLNPLIKKGQEKTLQDEDIPKLRESEQAESCYLSFVEQLRIQREKEPSSHSSVLWTITMCHRREILITGFFALLKVLAISCGPLLLNAFILVSEGNESFKYEGYILAISLFFEKIIESLSQRQWYFRSRIVGMKVRSLITAKIYKKTLRLSNSARLVHSSGEIMNYMTVDAYRIGEFPFWFHRTWTAILQLSIAIIILFRAIGIATLASLLVIVLTVFCNAPLAKLHHKFHSKLMMAQDERLKASSEALVNMKVLKLYAWETHFKNAIEKLRSVELKLLFAVLLRKTYAVFLFWTSPVMVSAASFVACYLLKIPLHASNVFTFVATLRLVQELITSIPDVIAVIIQAKVAFARIRNFLETQELHSSNFNSRDFNDNLKGSVVMKYADFSWEDNASKPTLRNINLDVRHGQKVAICGEVGSGKSTLLATILGEVPNTKGTIDVYGKFAYVSQTAWIQTGTIRENILFGSEFDDQRYQETLQKSSLIKDLELLPYGDLTDIGERGVNLSGGQKQRIQLARALYENADIYLLDDPFSAVDAHTAKSLFNEYIMEGLKGKTVLLVTHQVDFLPAFHSVLLMSDGVILQAGPYHHLMTKSEEFQDLVNAHKVTARSNQLVNVTFSQASQNIAQALVEKQCKEANGNQLIKQEEREIGDTGFKPYLQYLNTMKGYIFFSVSTFCHIFFVVSQILQNSWMAANVDNPHVATLQLVLVYFYIGASSIFFMLIRSLFVVSLGLHSSKYLFLQLMNSLFRAPMSFYDSTPLGRILSRVSSDLSIMDLDMPFSLLFSVGSTINFYACLIVLSVVTWQVLIIVIPMVYATILLQRYYLVSEKQMMRMSGTTKSCLANHVAETVAGAVTIRAFEEEDRFFKKNLDLIDMNASTFFHCFASNEWLTQRLETISALVLSSAALCMVILPPGTFTSGFIGLSLSYGLSLNASLVISVGFQCRLADNIISVERLNQYMHIQSEAKEIIEGNRPPLNWPVAGKVEINDLKIRYRPDGPLVLHGITCTFEAGHKIGIVGRTGCGKSTLIGALFRLVEPEGGKVVVDGIDISSIGLHDLRSRLGIIPQDPTLFNGTVRFNMDPLSQHTDQEIWEVLGKCQLREVVQRKEEGLNSSVVDDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNSTDLILQKTIRTEFADCSVITVAHRIPTVMDCTMVLSISDGKLVEYDEPMTLMKREESLFRKLVKEYWSHFQSAESH* 1474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3435 1473 Pfam ABC transporter 1244 1392 IPR003439 GO:0005524
Tpr7g3435 1473 Pfam ABC transporter 640 774 IPR003439 GO:0005524
Tpr7g3435 1473 Gene3D ABC transporter type 1, transmembrane domain 278 603 IPR036640 GO:0005524|GO:0016021
Tpr7g3435 1473 Gene3D ABC transporter type 1, transmembrane domain 874 1209 IPR036640 GO:0005524|GO:0016021
Tpr7g3435 1473 CDD ABCC_MRP_domain2 1225 1445 - -
Tpr7g3435 1473 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 69 1473 - -
Tpr7g3435 1473 CDD ABC_6TM_ABCC_D1 308 595 IPR044746 GO:0140359
Tpr7g3435 1473 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 624 845 IPR003439 GO:0005524
Tpr7g3435 1473 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 921 1190 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr7g3435 1473 SUPERFAMILY ABC transporter transmembrane region 295 595 IPR036640 GO:0005524|GO:0016021
Tpr7g3435 1473 Pfam ABC transporter transmembrane region 307 565 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr7g3435 1473 Pfam ABC transporter transmembrane region 915 1150 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr7g3435 1473 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1227 1461 IPR003439 GO:0005524
Tpr7g3435 1473 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 307 587 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr7g3435 1473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 617 845 IPR027417 -
Tpr7g3435 1473 CDD ABCC_MRP_domain1 622 821 - -
Tpr7g3435 1473 CDD ABC_6TM_ABCC_D2 909 1202 IPR044726 GO:0140359
Tpr7g3435 1473 Gene3D - 620 853 IPR027417 -
Tpr7g3435 1473 SUPERFAMILY ABC transporter transmembrane region 909 1207 IPR036640 GO:0005524|GO:0016021
Tpr7g3435 1473 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 69 1473 - -
Tpr7g3435 1473 Gene3D - 1211 1462 IPR027417 -
Tpr7g3435 1473 SMART AAA_5 649 828 IPR003593 -
Tpr7g3435 1473 SMART AAA_5 1253 1445 IPR003593 -
Tpr7g3435 1473 ProSitePatterns ABC transporters family signature. 747 761 IPR017871 GO:0005524
Tpr7g3435 1473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1217 1460 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3435 Tpr-Chr7 42605242 42611608 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3435 616 857 Calmodulin-binding Proteins AT2G36910 30.741 2.37e-24 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3435 K05666 - gmx:100787314 2205.64