Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3400 ATGGCATCATCATCAGCCCCTCAAGTCATAACTTGCAAAGGTGCAGTGGCATGGGGAGCTGGAGAGGCATTGGTAATGGAAGAAGTGGAAGTCAGTCCTCCTCAACCATTGGAGATTAGGATTAAGGTTGTCTCCACTTCTATCTGTTGTAGCGATCTTGCTGCTTGGAAACATCATACCATATTTCCTCGCATATTTGGCCATGAAGCATCTGGGGTTGTTGAGAGTGTAGGGCAAGGAGTGACAGAATTCAAAGAAGGGGACCATGTGTTAACAGTTTTCATTGGAGAATGCATGTCATGTAAGATGTGCAAATCAGGAAAGAGTACTATTTGTCAAGTTTTGGGACTCGAAAGAAAGGGTTTAATGCATAGCGATCAAAAGACGCGATTCATGGTAAAAGGGAAGCCTGTTTATCATTATTGTGCAGTTTCAAGTTTTAGTGAATATACAGTAGTCCATTCTGGATGTGCAGTGAAAATCAGTCCTCATGTACCTCTTGAGAAAGTATGCCTTCTCAGCTGTGGGGTTGCTGCAGGTCTAGGTGCAGCATGGAATGTTGCTGATATATCAAAAGGATCAACAGTGGTTATATTCGGTCTTGGAACTGTTGGCCTTTCTGTTGTTCAAGGTGCCAAACTAAGGGGTGCATCTAGAATAATAGGTGTCGACAATAATCCAAGGAAGTGCGAAAATGCTAAAGCTTTTGGGATTACAGAAGTTGTTGATCCGAATTCATGCAAAGAACCTATCGCACAGGTTATAAAGGGCATTACTGATGGTGGAGCAGATTTCTGTTTTGAATGTGTAGGCGACAGTGATATGTTAACCAATGCATTGGAGTCATGTTGTGATGGATGGGGTGTGACTGTAGCACTTGGTGTGCCAAGGGTGAAGCCTAAGATCTCAGCTCATTATTCTCTATTCCTTAGAGGAAGAACATTAAAAGGATCTATATTTGGAGGATGGAAACCTAAATCCGATCTTCCTTCATTGGTAGAGAAGTATATGAATAAGGAAATCCAGATTGATGATTACATAACACACAATTTGCCATTTGATGAGATTAACAAAGCTTTCAATCTCATGGCAGAAGGAAAGTGTCTTCGTTGTGTAATCCACATGCCAAGATAA 1134 0.4153 MASSSAPQVITCKGAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSICCSDLAAWKHHTIFPRIFGHEASGVVESVGQGVTEFKEGDHVLTVFIGECMSCKMCKSGKSTICQVLGLERKGLMHSDQKTRFMVKGKPVYHYCAVSSFSEYTVVHSGCAVKISPHVPLEKVCLLSCGVAAGLGAAWNVADISKGSTVVIFGLGTVGLSVVQGAKLRGASRIIGVDNNPRKCENAKAFGITEVVDPNSCKEPIAQVIKGITDGGADFCFECVGDSDMLTNALESCCDGWGVTVALGVPRVKPKISAHYSLFLRGRTLKGSIFGGWKPKSDLPSLVEKYMNKEIQIDDYITHNLPFDEINKAFNLMAEGKCLRCVIHMPR* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3400 377 PANTHER ALCOHOL DEHYDROGENASE-LIKE 6 6 375 - -
Tpr7g3400 377 PANTHER ALCOHOL DEHYDROGENASE 6 375 - -
Tpr7g3400 377 Gene3D - 180 318 - -
Tpr7g3400 377 Pfam Zinc-binding dehydrogenase 204 325 IPR013149 -
Tpr7g3400 377 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Tpr7g3400 377 Gene3D - 15 370 - -
Tpr7g3400 377 SUPERFAMILY GroES-like 6 186 IPR011032 -
Tpr7g3400 377 SUPERFAMILY GroES-like 326 374 IPR011032 -
Tpr7g3400 377 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 165 339 IPR036291 -
Tpr7g3400 377 Pfam Alcohol dehydrogenase GroES-like domain 38 160 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3400 Tpr-Chr7 42269718 42274370 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3400 15 112 Monolignol Biosynthesis Gene Families AT2G21730 36.190 5.89e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3400 K00001 - gmx:100819938 677.552