Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3397 ATGGATATTATTATTTCAGTTTGTGCTAAAATTGCTGAGTATATACCTATTGGTCGTCAGTTTGGTTACATACTCTACTACAAGGGTAACCTTGAAAGGATGAAAGCAGAGGTCCAAAAGCTGGAAGGATCAAAAGATAGTGTGCAGCATACTGTTGATGAGGCTAGAAGGAATGGAGAAGAGATTGAAAATTTTGTTCAGAACTGGCTAAACAAAGTGGACAACACTGTTGCTGAGGCATTGAAGCTTATTATTGACACTGAAGGCCATGCAGAAGCTCGGTGTTCTATGGGACACTTTCCCAATCTGTTCACAAGGCATCAATTGAGCAGGAAGACCAAAAAGATGTCACAAGAGATTTCTCAAGTCCTAGCAGATGGAAAATTTGACAAAATTTCTTACCGTGCTGCTTCTCAAGTGACAGTCACGCCATTTGGTAGAGGTTATGCAGCCCTGGACTCCAGAACATCAATGTTGAATGAGATTATGCTGGCATTGAAGAATCCTAACATCTTCGTTATTGGGGTGTATGGGATGGGTGGAGTGGGTAAGACAACACTAGTGAAAGAGTTAGCTTGGCAAGCTGAGAATGATGGGTCATTTAGTTCTGTAGCTATGGCCACTGTCACCGATTCTCCAGATTTGGAAAAAATACAAGGCCAAATTGCTGATGCCTTGGATATGAAATTTAACAAGGAGTCCATTGAAGGAAGAGCAACACAATTACGGCAAAGGATAACCAAGGAGAAGAGTATTCTTGTTATTCTGGATGACATTTGGGGTAGACTTGATTTGGTAGAAGTGGGGATTCCTTTTGGTGATGACCACAAAGGATGCAAGTTGGTCATGACATCCAGATATCTTAATATGTTGAACTGTGAGATGGGCACTCAGAAAGAATTTCGACTCGAAGTTTTACATCAGGATGATAGTTTGAAATTGTTTGAGGAAATGGCAGGTAATATTGTTCAAGAATTATATATAAAGCCAATTGCAGTAGAAGTGGCCCGATGTTGTGCTGGATTGCCCCTTTTGATAGTTACTGTGGCAAAGGCTTTGAGAAAAAAAGATGCTTCTGCTTGGAAAGATGCCTTAAATCAATTAGAGAGATTTGATCAACAAGGTTTGCATAAGAAAGTCTACTCTACCTTGGAGTTGAGTTATAATTGTTTAGAAAGGGACGATTTGAAGTCACTCTTCCTATTCATTGGTTCATTTGGACTGGACCATATCCACACCGGAATATTGTTTCAATGTTATTGGAGCTCAGGGTTTTGTGAACCTTTTCAGACATTGACAGAGGCTCGGAATCGATATTTCAACTTAATAAATGGTCTTAGGGCCTCTTCATTGTTACTTGAACGTGAAAGGGGTCGAGTAAGAATGCATGATGTTGTACGTGATGTAGCTAAATCAATTGCATCTAGGTTTCATCCTACTTATTCTGTGAAAAGGTACACTGAAGTAAACCTATGGCCAGAGATAGATCAGCTACAAAAGTGTCATCAAATCATTCTGCCTTGGTGTTATATTAATGAGCTTCCTGATATGTTGGAGTGCCCGGAGTTGAAGCTACTTCTACTTCATAATATAGGTGACAATTTGAAAGTCTCTGATGAGTTTTTCTCTGGGATGAGAGAAGTAACAGTTCTTCATTTATATGGGATGATGTTCACCCCTTCCCCACCTCAATCGCTCTCTCTCTTGAAAAAACTTCAAACATTGGTTCTGGCTGGATGTGTGTTAGAAGACATATCAATAGTTGTGGGACTGAAAAGTTTAGAGATTCTCAGCCTTGAAAGATCCGATATTATACAACTCCCAAAAGAATTAGGACAACTGGCTAATCTTCGAATGTTGAATTTAACCAACTGCTCTGGACTGAGATTCATTCCTGCAAATCTTATTTCGAGCTTGACATGCTTGGAAGAGTTGTACATGGGGAATTGCTTTATCCAATGGGATGTCAAGGGAAGCAAAGATCACGGCAACAATGCAAGTCTGGAAGAGCTAAGCAATTTGTCTCATCTAACAACTTTGGACATAATGATTCAAGATGCTTCAGTTTGGCCAAGGGACTTGCAGGTCTTTGAAAAGCTTGAAAGATACAACATATTTGTTGGTGATATGTGGAAATGGCCTTTGGAATGGTCTGGAGGTGCTTCAGAAACTTCAAGAATACTTAAGCTGGCAGAGAGTAAGAGTACAGACATTCTTTCAGATCATGGGTTTAACTTCTTGTTGAATTCAACAGAGGATTTGTGCCTCGGAAAATTACAGTGTGCTGGAGATGTCCTTTATGAGTTGAACAGGGAAGGTTTTTCACAATTAAAGCGTTTGTGCATTGAAGACAGTTCTGGCCTGAAGTACATCATTAACTTAATAGGCTCCATTCATCCCTATCCCGCCTTCCCCAACTTGGAGACTTTGGTTCTTCAAAATCTGTTTAATCTGGAAGAAATATGCCATGGCCCAATTCCAATTCAATCTTTTGCCAAACTGAAAATTATTGAAGTCAAAGGTTGTGATAAGTTGAAGCATCTATTTTGGTATTCCCTAGTTAGAGACCTTCCTCAACTTCTTGAAATAAAAGTTACTGATTGCGCACTATTCACACAAATCGTTGCTGAGCAAACATCCGAGACTGATAAAAAAATTGACAATATTATGTTCCCCAATTTGCATTCTCTTACACTTGAATGTTTACCTAGTCTCATTAGTTTCTGTTCCGTACCATTGACAGCGGATACTAGTTTCAAAGAATATGTTGAGAAGTGTGATGACTCACAACCCGTACCGGTGGCACTAATTAATCTAAAGATTGGAATGCCCCATCTTGAAACCTTGAAGCTGTCTAAGATCAATTCTTGGAAATTATGGGATGACAAGCTCTTGAGTTATTCTGGCTTTCAAAACTTGACAAGTTTGACAATTGACAAATGTCATAAAATAGCATACATATTCTCATCCTCATTGGCAAGAGCACTGATAACCCTGCAATATCTTGAGATCGGTAACTGCCAAATGTTGGAGGATGTATTTTCCTTTGATGCAAAGTTGGGTAATCATTCTTCAGCTCAGGAGCCTATCTCTAATGAGGATGTTGTATTCCCGAACTTAGTGTCATTGATAATCTCCCAAATGGATAACTTGAAGTCAGTATGGCACAATCAACTTGCTCCAAATTCCTTCTGCAAATTGAAGCATCTGGAAACTAAATTCTGCAATAAATTATTAAATGTAATCCCATCTTATCTTTTTGAAAACTTGCTGAATCTAGAGACAATAATTGTAACCAATTGTCCTGCACTGGAAGTTCTATTCGAAATACAAGATTTTAAAACAGGAGCTAGCAGCCAGATGGGACTGGAAATGCAGATGAGGAATCTTACTTTGGAGCATTTACCAATGCTTAAACACATATGGAGTAGAAATCCTTATGGAAGACTAAGGTTTCAAAACCTAGGGCAATTGAAAGTCGCTGAATGTAAAAGCCTTGATCATATTTTTCCATTCTCTGTGGCCAAAGAACTTCCATATCTCCAAGTGCTTCATATAGAAGAGTGTGACATAGAGATTATTGTAGCACAGGATGAAATGGCTGACACAGTTCCAATACTTGTTTTTCCAAAATTAACATCTTTGACTCTTCGATGTTTAACACAACTTAGAAGCTTCTGCTATGGACTACACACCTTGGGTGTGCCTTTCTTAAGAGATTTGGATGTGTATCACTGTGATCAACTAGAACTATTTGTGCCAATTTCTTTAAACTACCTAGGAAATGCCACAGTTGATCCACAAGCCCTACTGTCAATTGAAAAGGTTGTTCCAAACCTAAAGGAGCTTATTCTGAACGGAAGGGATGTCATTATGTTATGCAACGATCAACTTAATCACAGGCCTATCTACACAGTAAAAGTTCTACGCCTGCGTTGTTTTCACAATGAGACCGACCAATTTCCATCAGGCTTCCTCCAAAGATTTATCAATCTTGAAAATCTTATGGTGACCTGCAGTTCCTTCACAGAGATTTTCTCAAGTGGAAGCTTTGGCACTGACCATTCCGGCACAACAATGAAATTGAGAAAGCTAGTACTTGTTGAATTGCATAACCTTCAGTTTATATGTGAAGAAAAATCTGAGATGCAGTTTGCTGTTGAAAATCTTGAAGTATGTGAAGTATTTAAATGTTCGATACTTAGGAATATATTTCCATCCTCGGTACGATTTGAGAATTTAGAGAGAGTGAGAGTGGCCTTCTGTGTTGGATTGGAAAATATTATGTTATCATCAATTGCTACTAATTTACCTAAACTTCGGAGATTAATTATCGATAATTGTGAAACGATAGAAGAAATAGTTGCAAGTGATAAAGAAAATAATGCTGGCGAGATAGCTTTTATGAAATTGGAGTTTTTGCGATTGTATAACTTGCCACAGTTAAGAAGTTTTTACAAGGGAGGATACAGCCTCAATTTTCCAATGCTGCAGAAGTTATATGTGGGAAAATGTGACATGATAGAAACTTTCTCAGATGGAGTGTTGAACGCACCAAAGCTCAGAGCAGTATATCTGATTGATAGTTCAAATGGTCCCATGGCGTTGGAATGGTGA 4617 0.3864 MDIIISVCAKIAEYIPIGRQFGYILYYKGNLERMKAEVQKLEGSKDSVQHTVDEARRNGEEIENFVQNWLNKVDNTVAEALKLIIDTEGHAEARCSMGHFPNLFTRHQLSRKTKKMSQEISQVLADGKFDKISYRAASQVTVTPFGRGYAALDSRTSMLNEIMLALKNPNIFVIGVYGMGGVGKTTLVKELAWQAENDGSFSSVAMATVTDSPDLEKIQGQIADALDMKFNKESIEGRATQLRQRITKEKSILVILDDIWGRLDLVEVGIPFGDDHKGCKLVMTSRYLNMLNCEMGTQKEFRLEVLHQDDSLKLFEEMAGNIVQELYIKPIAVEVARCCAGLPLLIVTVAKALRKKDASAWKDALNQLERFDQQGLHKKVYSTLELSYNCLERDDLKSLFLFIGSFGLDHIHTGILFQCYWSSGFCEPFQTLTEARNRYFNLINGLRASSLLLERERGRVRMHDVVRDVAKSIASRFHPTYSVKRYTEVNLWPEIDQLQKCHQIILPWCYINELPDMLECPELKLLLLHNIGDNLKVSDEFFSGMREVTVLHLYGMMFTPSPPQSLSLLKKLQTLVLAGCVLEDISIVVGLKSLEILSLERSDIIQLPKELGQLANLRMLNLTNCSGLRFIPANLISSLTCLEELYMGNCFIQWDVKGSKDHGNNASLEELSNLSHLTTLDIMIQDASVWPRDLQVFEKLERYNIFVGDMWKWPLEWSGGASETSRILKLAESKSTDILSDHGFNFLLNSTEDLCLGKLQCAGDVLYELNREGFSQLKRLCIEDSSGLKYIINLIGSIHPYPAFPNLETLVLQNLFNLEEICHGPIPIQSFAKLKIIEVKGCDKLKHLFWYSLVRDLPQLLEIKVTDCALFTQIVAEQTSETDKKIDNIMFPNLHSLTLECLPSLISFCSVPLTADTSFKEYVEKCDDSQPVPVALINLKIGMPHLETLKLSKINSWKLWDDKLLSYSGFQNLTSLTIDKCHKIAYIFSSSLARALITLQYLEIGNCQMLEDVFSFDAKLGNHSSAQEPISNEDVVFPNLVSLIISQMDNLKSVWHNQLAPNSFCKLKHLETKFCNKLLNVIPSYLFENLLNLETIIVTNCPALEVLFEIQDFKTGASSQMGLEMQMRNLTLEHLPMLKHIWSRNPYGRLRFQNLGQLKVAECKSLDHIFPFSVAKELPYLQVLHIEECDIEIIVAQDEMADTVPILVFPKLTSLTLRCLTQLRSFCYGLHTLGVPFLRDLDVYHCDQLELFVPISLNYLGNATVDPQALLSIEKVVPNLKELILNGRDVIMLCNDQLNHRPIYTVKVLRLRCFHNETDQFPSGFLQRFINLENLMVTCSSFTEIFSSGSFGTDHSGTTMKLRKLVLVELHNLQFICEEKSEMQFAVENLEVCEVFKCSILRNIFPSSVRFENLERVRVAFCVGLENIMLSSIATNLPKLRRLIIDNCETIEEIVASDKENNAGEIAFMKLEFLRLYNLPQLRSFYKGGYSLNFPMLQKLYVGKCDMIETFSDGVLNAPKLRAVYLIDSSNGPMALEW* 1539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3397 1538 SUPERFAMILY L domain-like 492 1102 - -
Tpr7g3397 1538 Gene3D Ribonuclease Inhibitor 1061 1264 IPR032675 -
Tpr7g3397 1538 Gene3D Ribonuclease Inhibitor 1267 1531 IPR032675 -
Tpr7g3397 1538 SUPERFAMILY RNI-like 1304 1527 - -
Tpr7g3397 1538 SUPERFAMILY RNI-like 1126 1288 - -
Tpr7g3397 1538 Gene3D - 146 304 IPR027417 -
Tpr7g3397 1538 Pfam NB-ARC domain 158 389 IPR002182 GO:0043531
Tpr7g3397 1538 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 403 IPR027417 -
Tpr7g3397 1538 Gene3D - 305 392 IPR042197 -
Tpr7g3397 1538 PANTHER - 1148 1235 - -
Tpr7g3397 1538 PANTHER - 3 1136 - -
Tpr7g3397 1538 PANTHER - 1370 1524 - -
Tpr7g3397 1538 Coils Coil 31 58 - -
Tpr7g3397 1538 Gene3D Ribonuclease Inhibitor 468 713 IPR032675 -
Tpr7g3397 1538 PRINTS Disease resistance protein signature 173 188 - -
Tpr7g3397 1538 PRINTS Disease resistance protein signature 246 260 - -
Tpr7g3397 1538 PRINTS Disease resistance protein signature 339 353 - -
Tpr7g3397 1538 PRINTS Disease resistance protein signature 612 628 - -
Tpr7g3397 1538 CDD AAA 159 285 - -
Tpr7g3397 1538 PANTHER RPP4C3 3 1136 - -
Tpr7g3397 1538 PANTHER RPP4C3 1370 1524 - -
Tpr7g3397 1538 PANTHER RPP4C3 1148 1235 - -
Tpr7g3397 1538 Gene3D Ribonuclease Inhibitor 723 1032 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3397 Tpr-Chr7 42220533 42235026 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3397 161 492 WRKY Transcription Factor Family AT5G45050 26.608 6.67e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3397 - - mtr:MTR_2g072030 1932.92