Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3375 ATGAGTTTTATGAATCACATAAGAACCGTTGCCAAAGAAGCATTAGACCGTACATCAATAATCGCGAAATTTCTATGTTGTCTTCACTTCACAAGCAGCTACCTTTGTTCTCCAACACACGCGTATGGACCTAGTATGCTCCCTACCCTAAATATTGCTGGCGATGTTGTTCTTGTTGAGCATCTTTCTCCAAGGATTGGGAAAGTTGGTTATGGTGATTTGGTTCTTGTTAGGTCACCTTTGAACCCTAATCGGAATTTGACAAAACGTGTTGTTGCTATGGAAGGGGATACTGTTACTTATTTTGATCCTTTGAATTCCGATTCTTCTCGAAATGCTGTGGTGCCGAAGGGGCATGTTTGGATTCAAGGAGATAACATCTACGCTTCTCGTGATTCACGTCATTTTGGTCCCGTTCCATATGGTCTTATAAAAGGAAAAGTGTTTTTCCGGGTTTGGCCACCCAGTAGTTTTGGACTGCTAGATAATTGA 492 0.4146 MSFMNHIRTVAKEALDRTSIIAKFLCCLHFTSSYLCSPTHAYGPSMLPTLNIAGDVVLVEHLSPRIGKVGYGDLVLVRSPLNPNRNLTKRVVAMEGDTVTYFDPLNSDSSRNAVVPKGHVWIQGDNIYASRDSRHFGPVPYGLIKGKVFFRVWPPSSFGLLDN* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3375 163 Pfam Signal peptidase, peptidase S26 21 101 IPR019533 GO:0004252|GO:0006465
Tpr7g3375 163 Pfam Signal peptidase, peptidase S26 111 153 IPR019533 GO:0004252|GO:0006465
Tpr7g3375 163 CDD S26_SPase_I 43 148 IPR019533 GO:0004252|GO:0006465
Tpr7g3375 163 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 5 161 - -
Tpr7g3375 163 PANTHER PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN 5 161 - -
Tpr7g3375 163 PRINTS Bacterial leader peptidase 1 (S26A) family signature 34 50 IPR000223 GO:0006508|GO:0008236|GO:0016020
Tpr7g3375 163 PRINTS Bacterial leader peptidase 1 (S26A) family signature 87 99 IPR000223 GO:0006508|GO:0008236|GO:0016020
Tpr7g3375 163 PRINTS Bacterial leader peptidase 1 (S26A) family signature 115 134 IPR000223 GO:0006508|GO:0008236|GO:0016020
Tpr7g3375 163 Gene3D Umud Fragment, subunit A 32 159 - -
Tpr7g3375 163 SUPERFAMILY LexA/Signal peptidase 33 161 IPR036286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3375 Tpr-Chr7 41929715 41935467 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3375 46 161 MADS-box Gene Family AT1G29960 52.991 5.23e-39 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3375 K09647 - csin:114274489 242.276
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3375 7 41929715 41935467 Tpr7g3375 7 41929715 41935467 ECH