Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3371 ATGAGGAAATCCCTAGTTATCGCCTTTTCGATAACTATATGCTTCATTGCCTTTGTGATATCCAAGATTATAATCTCAATCCTTCTCTACAAAAGATGGAGAAAAAAGCATTTGATTTATGAAGAAGGTTATGGAGGAGGGAAGATGGTGATATTTAGGTCTTCAATCCTTAAATCATTAACAGCTGATATGGTGTTGAAGAAGACACAGAAACTGAACAACAAGGACATTATTGGTTCTGGTGGTTATGGTGTAGTTTACGAACTAAAACTGAATGATTCCGCGGCCTTTGCTGTGAAAAGACTGAACCGCGGAACTGCAGAAAGAGATAAAGGTTTTGAGAGAGAGTTACAAGCAATGGCAGACATAAAACATCGCAATGTTGTGACTCTACATGGATATTACACTGCACCACACTACAATCTTCTCATTTATGAGTTAATGCCTAATGGAAGTTTGGATACCCTTTTGCATGGGAAATCAAAGAACAAGAAGGTTTTGGATTGGCCAACCAGACACAGAATAGCTGTAGGTGCGGCAAGAGGAATATCATACCTTCACCATGACTGTATCCCTCACATTATCCACAGAGACATCAAGTCAAGTAATATATTGTTGGATCAGAATATGGAAGCTCGAGTTTCGGATTTCGGATTAGCCACATTGATGGAACCAAACAAAACTCATGTTTCTACAATTGTTGCTGGCACTTTTGGATACTTGGCTCCAGAATATTTTGATACCGGAAGAGCAACAGTGAAAGGGGATGTTTATAGTTTTGGAGTTGTGTTACTTGAGCTTTTAACAGGAAAGAAACCAAGTGATGAAACATTTATGGAAGAGGGAACGAAACTTGTCACATGGGTGAAATCTGTAGTTCAAGAGAAGAAAGAGGAATTAGTTCTTGATAGTAGCTTAGGGTCATGTCCAATGCATGAGGTCAACAAGGTGTTCAACATTGCAATGATGTGTCTTGAACCAGACCCTTTGAATAGACCAACCATGGCCGAGGTTGTCAACTTGCTCTATAAAACACAAACAGATAGACTTGCTACAGAATCCTGA 1065 0.3925 MRKSLVIAFSITICFIAFVISKIIISILLYKRWRKKHLIYEEGYGGGKMVIFRSSILKSLTADMVLKKTQKLNNKDIIGSGGYGVVYELKLNDSAAFAVKRLNRGTAERDKGFERELQAMADIKHRNVVTLHGYYTAPHYNLLIYELMPNGSLDTLLHGKSKNKKVLDWPTRHRIAVGAARGISYLHHDCIPHIIHRDIKSSNILLDQNMEARVSDFGLATLMEPNKTHVSTIVAGTFGYLAPEYFDTGRATVKGDVYSFGVVLLELLTGKKPSDETFMEEGTKLVTWVKSVVQEKKEELVLDSSLGSCPMHEVNKVFNIAMMCLEPDPLNRPTMAEVVNLLYKTQTDRLATES* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3371 354 Gene3D Transferase(Phosphotransferase) domain 1 148 353 - -
Tpr7g3371 354 ProSiteProfiles Protein kinase domain profile. 72 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3371 354 ProSitePatterns Protein kinases ATP-binding region signature. 78 100 IPR017441 GO:0005524
Tpr7g3371 354 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 346 - -
Tpr7g3371 354 SMART serkin_6 72 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3371 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Tpr7g3371 354 PANTHER BNAA07G39120D PROTEIN 1 346 - -
Tpr7g3371 354 SUPERFAMILY Protein kinase-like (PK-like) 53 345 IPR011009 -
Tpr7g3371 354 Gene3D Phosphorylase Kinase; domain 1 48 147 - -
Tpr7g3371 354 Pfam Protein kinase domain 74 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3371 Tpr-Chr7 41902465 41906888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3371 3 342 Receptor kinase-like Gene Family AT2G35620 46.064 3.58e-100 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Tpr7g3371 Pkinase 1.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3371 - - ahf:112703495 581.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3371 7 41902465 41906888 Tpr7g3371 7 41902465 41906888 ECH