Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3342 ATGGTGGGGTTCCAGAACGAGCTTATGACTGGGAACGAGTATAATGGTAATTTTAGTAGTAGTCCAGGTCGTGTTGAACGACTTGTGAGAGGAAGAGAGCTAAGAAAAAACAACAAGGCACCATCTCTTATGATTGAATCTCCTAATACTGTTCTAATTAATAACAATAATAATATTAATAACAATAACAATATTAATAATAATAACTGTAATAATAATAATAATCATAATCTGGTTACTGAATCTTTTGAGCATGGCCTGTGCTTAAAAGAATATAATAACTCTGGTGCTTCCCATGATGAACGATTCGTGGAAGGTGCTGTAGCAGCAGTAAAGGCTCTTAGTGGTGGATATCAAAGGGAAGCTGCAAAACCTGTTAGACAACGGCTTTTGGTTGTGGCGAATAGACTGCCAGTTTCAGCTGTTAGGAAAGGTGAGGATACTTGGTCTTTGGAGATCAGTGCTGGTGGCTTGGTGAGCGCGCTTTTAGGTGTGAAGGAGTTTGAAGCGAGGTGGATAGGTTGGGCTGGAGTCAATGTGCTGGATGAGGTTGGACAGAAGTCACTCTCCGAAGCATTGGCTGAAAAGAGGTGTATCCCAGTGTTTCTTACTGAAGAAATTGTTCATCGGTACTATAATGGCTATTGCAATAACATATTGTGGCCCCTTTTTCATTACCTTGGACTTCCACAAGAAGATCGTCTAGCGACAACTCGTGGTTTCGAGTCTCAATTTGATTCGTATCAGCAGGCAAATCAAATGTTTGCTGATGTTGTAAATGAGGTCTATGAAGAGGGTGATATTGTTTGGTGCCATGATTACCATCTTATGTTTCTACCACAATGCTTAAAGAAATTCAACAAGAAAATGAAGGTTGGCTGGTTTCTCCATACCCCATTTCCATCTTCTGAAATTCACAGGACACTGCCATCTCGTTCGGAGCTCCTGCGTGCAGTTCTTGCTGCTGATTTGGTCGGTTTTCACACCTATGATTATGCACGACACTTTGTTAGTGCTTGTACTCGCATTCTTGGACTTGAAGCCACACCAGAAGGGGTTGAGGATCATGGCAAACTGACTCGAGTTGCTGCATTTCCAATTGGTATAGACTCAGAGCGCTTCATCAATGCACTTGACCACCCTAAAGTCCAAGGTCCCATGAAAGACTTACAAGAAAGGTTTAAAGGCAGAAAGGTTATGTTAGGTGTTGATCGCCTTGATATGATTAAAGGAATTCCTCAAAAACTTCTAGCTTTTGAGAAATTTTTGGAAGAAAATGAACATTGGCGAGATAAAGTTGTTCTGCTCCAAATTGCTGTGCCAACAAGAACAGATGTTCCGGAGTATCAAAAGCTTACAAGCCAGGTTCATGAAATTGTTGGTCGCATCAATGGCAGATTTGGATCACTGACTGCTGTTCCTATACATCACCTGGACCGCACTCTTGAATTTCATTCACTATGTGCTTTGTATGCTGTTACAGATGTAGCAATTGTCACCTCTTTGAGGGATGGAATGAATCTTGTCAGTTACGAGTTTGTGGCCTGCCAAGAAAAAAAGAAGGGAGTTCTCATTCTTAGTGAATTTGCTGGTGCGGCGCAGTCTCTTGGTGCTGGGGCACTTCTGGTCAACCCCTGGAACATCTCACAAGTTGCTGAAGTAATTGCCAAAGCTCTGAACATGCCATCTGCTGAGAGAGAGAAACGACATAGGCACAACTTCCATCATGTAACAACCCACACTGCACAGGAATGGGCAGAAACTTTTGTTAGCGAGCTAAATGATACTGTTGTTGAGGCTCAGCTAAGGACAAAACAATTTCCACCACGGCTCCCAACCCCGAAAGCAATTCAACAATATCTGAAGTCAACTAATCGATTGCTTATTTTGGGATTCAATGGAGCTTTAACTGAGCCAGTTGAGAGAAAAGGTGATCAGTTGAAAGAAATGGAACTCTCGGTGCATCCAGAATTGAAACAACCCTTGGCACAACTTTGCAGTGATCCAAATACTACAGTTGTCGTGCTTAGTGGAAGTGGTAGAACACTTCTAGATGAAAACTTTAGAGAATATAACACTTGGCTGGCAGCAGAGAATGGAATGTTTTTAAACCCTTCAAATGGAGAATGGATGACAACAATGCCAGAACAACTAAATATGGAATGGGTTGACAGCGTAAAGCATATTTTTGAGTATTTCACTGAAAGAACACCTCGGTCACATTTTGAAGAACGGGAGGCTTCGCTTGTATGGAATTACAGACATGCAGATGTTGAGTTTGGAAAACTTCAAGCAAGGGACATGCTGCAACATCTCTGTTCAGGTCCAATTTCAAGTGCATCAGTTGAAGTAGTTCAAGGGAGCCGATCAGTTGAGGTGCGAGCTGCTGGTGTTACAAAGGGAGCAGCCATTGACCGCATCCTGGGGGAGATAGTTCACAGTAAATCCATGACAACACCAATTGACTATGTTCTGTGTATAGGACATTTTCTGGGAAAGCAGGATGAAGACATATACGACTTTTTTGAGCCAGAGCCTTCTTGTTATGGTGCGAGTATTCAACGAAGCAAGTTAACAGATGCAGCTAAGTTTTCTAATGAGAAGGCATCACCAATGAAGATCCCAGCAATTAAAAATGGATTCAAGTCAACAAATCAAAACAAGGGACAACGCCCTATCTCAAATTCAGATAAGAAAACAAATCATTTCAGCCGTGCAGCACGGAAGCCAGCTCCCGAGAAGATTTCTTGGAATGTCCTTGACCTCAAGAAGGAGAATTACTTCTCATGTGCTGTTGGGAGAACTCAAACAAATGCTCGCTTTACGCTTCCATCATCTGATGATGTTGCTGACTTTCTGAAGAAACTTGCACATGCATCTTCTAGTAATAACTGA 2895 0.42 MVGFQNELMTGNEYNGNFSSSPGRVERLVRGRELRKNNKAPSLMIESPNTVLINNNNNINNNNNINNNNCNNNNNHNLVTESFEHGLCLKEYNNSGASHDERFVEGAVAAVKALSGGYQREAAKPVRQRLLVVANRLPVSAVRKGEDTWSLEISAGGLVSALLGVKEFEARWIGWAGVNVLDEVGQKSLSEALAEKRCIPVFLTEEIVHRYYNGYCNNILWPLFHYLGLPQEDRLATTRGFESQFDSYQQANQMFADVVNEVYEEGDIVWCHDYHLMFLPQCLKKFNKKMKVGWFLHTPFPSSEIHRTLPSRSELLRAVLAADLVGFHTYDYARHFVSACTRILGLEATPEGVEDHGKLTRVAAFPIGIDSERFINALDHPKVQGPMKDLQERFKGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENEHWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGSLTAVPIHHLDRTLEFHSLCALYAVTDVAIVTSLRDGMNLVSYEFVACQEKKKGVLILSEFAGAAQSLGAGALLVNPWNISQVAEVIAKALNMPSAEREKRHRHNFHHVTTHTAQEWAETFVSELNDTVVEAQLRTKQFPPRLPTPKAIQQYLKSTNRLLILGFNGALTEPVERKGDQLKEMELSVHPELKQPLAQLCSDPNTTVVVLSGSGRTLLDENFREYNTWLAAENGMFLNPSNGEWMTTMPEQLNMEWVDSVKHIFEYFTERTPRSHFEEREASLVWNYRHADVEFGKLQARDMLQHLCSGPISSASVEVVQGSRSVEVRAAGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLGKQDEDIYDFFEPEPSCYGASIQRSKLTDAAKFSNEKASPMKIPAIKNGFKSTNQNKGQRPISNSDKKTNHFSRAARKPAPEKISWNVLDLKKENYFSCAVGRTQTNARFTLPSSDDVADFLKKLAHASSSNN* 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3342 964 SUPERFAMILY HAD-like 626 957 IPR036412 -
Tpr7g3342 964 MobiDBLite consensus disorder prediction 884 900 - -
Tpr7g3342 964 Gene3D Glycogen Phosphorylase B; 121 375 - -
Tpr7g3342 964 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 51 957 IPR001830 GO:0003824|GO:0005992
Tpr7g3342 964 Gene3D - 716 796 - -
Tpr7g3342 964 Pfam Trehalose-phosphatase 649 868 IPR003337 GO:0003824|GO:0005992
Tpr7g3342 964 Pfam Glycosyltransferase family 20 129 594 IPR001830 GO:0003824|GO:0005992
Tpr7g3342 964 Gene3D - 650 810 IPR023214 -
Tpr7g3342 964 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 51 957 - -
Tpr7g3342 964 CDD HAD_TPP 627 845 - -
Tpr7g3342 964 CDD GT20_TPS 129 594 IPR001830 GO:0003824|GO:0005992
Tpr7g3342 964 Gene3D Glycogen Phosphorylase B; 376 578 - -
Tpr7g3342 964 MobiDBLite consensus disorder prediction 884 909 - -
Tpr7g3342 964 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 129 594 IPR012766 GO:0003825|GO:0005992
Tpr7g3342 964 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 128 597 - -
Tpr7g3342 964 TIGRFAM T6PP: trehalose-phosphatase 627 853 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3342 Tpr-Chr7 41570873 41587432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3342 9 962 Trehalose Biosynthesis Gene Families AT1G78580 71.576 0.0 1393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3342 K16055 - gmx:100789554 1469.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3342 7 41570873 41587432 Tpr7g3342 7 41570873 41587432 ECH