Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3325 ATGACCACTTCATCTCAATTTTTCTTTCTTTCACTCATTGTCATTTGGTTCATATCTCTAACAGCTTTTGCTGCTACTACTATTGACCCCAACGAAAAGAATGCTCTCAAAGATATAGCTAAGTCACTTGGTAAGAAGGATTGGAACTTCGACATAGATCCATGCAGCAACAAATCTAACTGGGTTATGCCTATGGCTGAGACTCCCATATTGAGAATTATAGTGAGCATTGTTTCCTGTAACTGCTTTATTCCCGGTGATAACTTCTGCCATGTTGTTTCAATAATTTTGAAAGGGCAAAATCTCCCTGGCACTCTCCCGCCAGAACTGACCAGGTTGCGTTACCTTCAAACTATTGACCTCTCTCGTAATTACTTGAATGGTACAATTCCGAAACAATGGGGATCTATGATGAATATTAGTAAAATTGCTCTCGGCGGAAATCGATTAACGGGTCCAATACCAGTGGAGATTGCAAACATATCTACTCTCCAATACTTGGAGTTAACGGGCAATCAAATGTCTGGAAATATTACTCCTGAGCTTGGGAATCTAGCCCAGATTCAATCACTACGAATTTCCTCCAACAATTTTAGCGGAGAACTCCCTGTGACATTGGCCAAGCTTACTACACTGCAAGATTTCCGAATTGAGGACAACCGATTCTTTGGAAAGATACCTGATTATATTCAGAACTGGTCACGTATCAAAACACTAGTGATTCAAGGAAGTGGATTAAGTGGGCCGATTCCTTCTGGAATTTCACTTTTGACAAACTTAACTGACTTGAGAATTAGTGATTTGGATGGATCTGAATATGCACCTTTGCCACAACTTAATAATATGACATTGTTACAAACTCTGATTCTGAGGAACTGCAAAATCAATGGGACACTGCATGATTATCTTGGGACTATGAAATTCTTAAAAATCTTAGACCTCAGCTTTAACAGATTAAGTGGAGCAGTTCCGAGTACCTATGCCTACATGAAAAGTTCAAAATACATATTTTTAACTGGAAACCGTCTCACTGGCCACATGCCTGCTTGGAAAACGGACGTTGACATAGATCTTTCATACAATAACTTCAGCATCAGCCAAGGGAGTAGTCAGATATGTCAAGAAGAAAATGTGAACTTATTTTCTACCTCATGGGCACACAATGACATAGGAACAGTTCCGTGCTTGAGGTTTGAATGTCCCAAACCCTCATACTCCCTTTATATCAATTGTGGTGGACAGCAAACCACGGTCAACAGAACAAGTTATTATGGTGATCCAGATTTACCTGGACCGGCTAGATTCCATCACAGTCCAAAAGGAAATTGGGCATTTAGCACCACTGGTATATTTATGGAAAGTAATCAATTTCGAGAATATTATCGGCCACAAATTATCACAAAACTTACTATGGTGGATGCTGAATTGTATATGAATGCACGTGGTTCTCCTATTTCTTTGACTTATTATGGGTTTTGCCTGGCAAATGGAAGCTACACAGTGAAACTACATTTTGCTGAAATAATGTTCACAGACGATCAAACTTATGGTAGTCTTGGAAGGCGTGTATTTGATATCTACCTTCAGGGAAAGCAGGTGCAAAAGGACTTCAATATTGCAAAAGAAGCAGGAGGAGTTGGTAAGAAGGTCGTGAAATTGTTCAAAGATGTTGCTGTTACTAGTAATACCTTGGAGATCCGCTTATATTGGGCTGGAAAAGGGACACAGGCTCTCCCAAATAAATCAGTATATGGTCCTCTTATATCGGCTATATCCGTGGAATCTGATTCTCCGGGAAGCATATCTGCAGGAGCTTTGGTTGGAATTGTGGTTGCAGCAGCAATTATTATCATTCTATTAATTGGTATACTTTGGTGGAAAGGATGTTTTGGAAAGAAAAACACATTAGCAAGAGAGCTGGAGAGTTTAGACCTACAAACAGGTTTATATACCTTAAGACAAATCAAAGCAGCAACAAACAACTTTGATATTTCCAATAAGATTGGAGAAGGAGGATTTGGTCCTGTGTACAAGGGATGTTTATCCAATGGGACATTGATTGCAGTAAAGCAACTTTCTTCTAAATCAAGGCAAGGGAACCGTGAGTTTTTAAATGAGATAGGCATGATTTCTGCTTTACAACACCCATATCTTGTTAAACTCTATGGCTGTTGTGTGGAGGGAGATCAATTGTTGCTGATATATGAATACTTGGAAAACAATAGCCTTGCCCGTGCCTTATTTGGTCCAGAGGAAGAACAGATCAAATTAGATTGGTTAATAAGGCAGAAGATTTGTGTTGGTATTGCTAGTGGTTTGGCATTTCTTCATGAAGAATCAAGACTGAAGGTTGTTCACAGGGACATCAAGGCCACTAATGTGTTGCTCGATAAAGATCTGAACCCAAAGATATCTGATTTTGGTTTGGCCAAGCTTGACGAGGAGGACAATACTCACATTAGCACTAAAATTGCTGGGACCTATGGATATATGGCTCCTGAATATGCAATGCATGGTTATTTGACCGACAAAGCAGATGTTTATAGTTTTGGAATTGTTGCTTTGGAAATCATTAGTGGAAGGAGCAACACCCTTTATCGGACAAGGGAAGAAGCATTCTATCTTCTTGATTGGGCACATTCGTTGAAAGAAAGTGGTGACCTAATGGAACTCGTTGATAGAAGATTAGGTTCAAATTTCAATACAAAAGAAGCTCTGGTGATGATCAATGTGGCTCTTCTGTGCACCAATGTCACTTCAAACATTAGGCCCTCTATGTCATCAGTGGTAAGTATGCTTGAAGGAAAGACTGTGGTGCCAGAATTTGTGCCAGAATCAAGTGAAGTAATGGATGAAAAGAAGTTGGAAGTAATGAGGCAGTATTACTATCAGATGGAAGAAAATAAGATAAGTAAGCCACAGACAGAAAGTCAGAGTTTATTAAGTGATGGGCCATGGACTGCTACATCTTCATCAGGTGTAGACCTTTATCCTATCCACAGTGATGCTTCCTATTGGGAGGGAAGAAGTTAA 3033 0.396 MTTSSQFFFLSLIVIWFISLTAFAATTIDPNEKNALKDIAKSLGKKDWNFDIDPCSNKSNWVMPMAETPILRIIVSIVSCNCFIPGDNFCHVVSIILKGQNLPGTLPPELTRLRYLQTIDLSRNYLNGTIPKQWGSMMNISKIALGGNRLTGPIPVEIANISTLQYLELTGNQMSGNITPELGNLAQIQSLRISSNNFSGELPVTLAKLTTLQDFRIEDNRFFGKIPDYIQNWSRIKTLVIQGSGLSGPIPSGISLLTNLTDLRISDLDGSEYAPLPQLNNMTLLQTLILRNCKINGTLHDYLGTMKFLKILDLSFNRLSGAVPSTYAYMKSSKYIFLTGNRLTGHMPAWKTDVDIDLSYNNFSISQGSSQICQEENVNLFSTSWAHNDIGTVPCLRFECPKPSYSLYINCGGQQTTVNRTSYYGDPDLPGPARFHHSPKGNWAFSTTGIFMESNQFREYYRPQIITKLTMVDAELYMNARGSPISLTYYGFCLANGSYTVKLHFAEIMFTDDQTYGSLGRRVFDIYLQGKQVQKDFNIAKEAGGVGKKVVKLFKDVAVTSNTLEIRLYWAGKGTQALPNKSVYGPLISAISVESDSPGSISAGALVGIVVAAAIIIILLIGILWWKGCFGKKNTLARELESLDLQTGLYTLRQIKAATNNFDISNKIGEGGFGPVYKGCLSNGTLIAVKQLSSKSRQGNREFLNEIGMISALQHPYLVKLYGCCVEGDQLLLIYEYLENNSLARALFGPEEEQIKLDWLIRQKICVGIASGLAFLHEESRLKVVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHISTKIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIISGRSNTLYRTREEAFYLLDWAHSLKESGDLMELVDRRLGSNFNTKEALVMINVALLCTNVTSNIRPSMSSVVSMLEGKTVVPEFVPESSEVMDEKKLEVMRQYYYQMEENKISKPQTESQSLLSDGPWTATSSSGVDLYPIHSDASYWEGRS* 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3325 1010 CDD STKc_IRAK 668 935 - -
Tpr7g3325 1010 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 79 976 - -
Tpr7g3325 1010 Gene3D Ribonuclease Inhibitor 272 379 IPR032675 -
Tpr7g3325 1010 Gene3D Ribonuclease Inhibitor 203 271 IPR032675 -
Tpr7g3325 1010 Gene3D Ribonuclease Inhibitor 31 202 IPR032675 -
Tpr7g3325 1010 SUPERFAMILY Protein kinase-like (PK-like) 645 948 IPR011009 -
Tpr7g3325 1010 SMART serkin_6 662 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3325 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672|GO:0006468
Tpr7g3325 1010 ProSiteProfiles Protein kinase domain profile. 662 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3325 1010 Gene3D Transferase(Phosphotransferase) domain 1 738 945 - -
Tpr7g3325 1010 Gene3D Phosphorylase Kinase; domain 1 631 737 - -
Tpr7g3325 1010 Gene3D - 404 596 - -
Tpr7g3325 1010 Pfam Protein tyrosine and serine/threonine kinase 664 933 IPR001245 GO:0004672|GO:0006468
Tpr7g3325 1010 Pfam Malectin domain 406 591 IPR021720 -
Tpr7g3325 1010 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 79 976 - -
Tpr7g3325 1010 SUPERFAMILY L domain-like 76 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3325 Tpr-Chr7 41340943 41370111 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3325 24 983 Receptor kinase-like Gene Family AT1G53420 53.086 0.0 965
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr7g3325 PK_Tyr_Ser-Thr 6.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3325 - - gmx:732563 1264.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3325 7 41340943 41370111 Tpr7g3325 7 41340943 41370111 ECH