Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3316 ATGTTTTTTCTCATGTCAAGAAGCTTCAAACATGTATCTTTGTTCTTCTTTTTGTTCATTGCTTTCTCAATGTTTGGATCCAACTCTCAACTATTACCACAAGATGAAGTGAAATTGCTACAAACAATATCAGACAAGGTACATAACTTGAATTGGAAGGTTACACAACGTTCTTGCAATGGGGATAAAGGATTTGGTAACAAGATTATTGTTGGAGATCAAATTACAAGAAATGTCACGTGTGATTGTTCATTCAATGCTAGCACTGTTTGTCATGTGACAATGATCTCGCTGAAGGGTCTCAATATATCTGGAGTTTTTCCTAGTGAATTTGGAAATCTCACTCAACTCACAATACTTGATCTAACTCGGAATTATCTAAATGGCTCAATTCCAAAGAGTCTTGGTCGCCTCCCACTTGTCAGAATGTCATTTTTGGGAAATCGACTTAGTGGTCAAATTCCCTCAGAAATTGGTGATATTGTCACCCTGCAAGAACTGAATTTTGAGAATAATCGACTTGAAGGGCCTCTTCCTTCCAGCCTCGGAAATTTGAAGAACTTGCAGAGATTCATGCTTTCTGCGAATAATTTTACAGGATCAATACCAGAAACATTTGGAAAACTAAAGAATCTCACTAATTTTAGGATCGATGGAAGCAGTTTATCTGGAAAGATCCCGAGTTTTATCGGAAACTGGACCAAAATTGAAAGATTGGATTTGCAAGGCACATCCATGGAAGGTCCAATTCCTCCTGCTATATCTGTCTTGACAAAGTTGAAGGAATTGAGAATATCTGATTTGAAGGGACAAACAACAATGAAATTTCCTGATCTGAAGGATCTGCAAAGCATGACAAGACTGGAATTGAGAAATTGCTTAATCACTGGTCCTATTCCGGACTACATCGGTGAGATGGAAAATCTAAAAACATTAGATTTGAGCTCCAACAGATTAACTGGTCCAATTCCAGATTCACTTCAGGACTTGGACTTGGAATCAATTAACTTCGTGTTTCTGACTAACAACTCTCTGAGTGGAACAATTCCAGGATGGATAGTGAACAACAAACAGTACTTTGATTTATCTTTCAACAATTTTACTGACGCTGCTACATCTAGTTGCCAGCCCTTGGATGTAAACTTAGCTTCCAGTGTCTCTCCTTCATCAAACACTTCATTGTCTTGTTTGAAGATGAACCTTCCTTGTTCGGGAAACCCTCGGTATCATTCACTCTTCATAAATTGTGGAGGACCTGCAACTGAATTTGAAGGCAATGAATATGAAGCCGACGAACATTTACGTGGAATTTCGACTTTTTTTCCTAGTGATGATGGAAAATGGGCATATAGCAGCACAGGAGTATTTCTTGGAAATGAAAGAGCTGATTATGTGGCAAGAAATACGTTCTCTTTGAATATCAATGGTTCTGCATACTACCAAACAGCCCGCATTGCACCGATATCTCTTAAATACTTTGGCCTTTGTATGATGAAAGGAAATTATAACGTGAAACTTCATTTTGCTGAGATAATGTTTTCTAATGACCAGACATATAGCAACCTTGGAAGGCGCATATTCGATGTTTCAATTCAAGGTTTTAAATATTTGAAAGATTTTAACATTATGGAAGCAGCTGGTGGAGTTGGCAAGGGAATCACTAGGGATTTTAATGTTGATGTTAATCATAGTACCTTGGAAATCCACTTATCTTGGGCAGGGAAAGGAACTAATGCCATTCCTATGAGAGGTGTATATGGACCTCTTATATCTGCTATCACTGTCACCCCAAACTTTAAAATTCCTTCAAATGGATTGTCTGCTGGAGCGATTGTTGGAATTGTGGTCGGATCATTGGCGGTTATCATTCTGATACTCTTTGTCCTTTGGAAGATGGGTTATATCTTTCGGAAGGATCAAACAGATAAAGAACTCCTAGAATTAAAAACAGGTTATTATAGTTTGAGACAAATTAAAGCTGCTACTAATAACTTTGATCCAGAAAATAAGATAGGCGAAGGAGGATTTGGTCCTGTTTACAAGGGTGTACTGTCAGATGGTGCTGTCATTGCTGTTAAACAGCTCTCTTCCAAATCAAAGCAAGGAAACCGTGAATTCGTTAATGAAATAGGTATGATATCAGCTTTGCAGCATCCGAATCTTGTGAAGCTTTATGGATGTTGCATTGAAGGAAACCAATTGCTGCTTGTATATGAGTACATGGAGAACAATAGTCTTGCTCGCGCTCTTTTCGGTAAACCGGAACAGAAGTTGAACTTGGACTGGAGCACGAGAATGAAGATATGTGTCGGGATAGCAAGAGGTTTAGCTTATCTTCATGAGGAATCAAGGTTGAAAATAGTTCACAGGGATATTAAGGCGACCAATGTCTTACTTGATAAGAATCTAAAAGCAAAGATCTCTGATTTCGGTTTAGCCAAGCTTGATGAAGAAGAAAATACTCATATCAGCACGCGAATAGCAGGGACAATAGGTTACATGGCTCCTGAGTATGCTATGCGGGGTTACTTGACCGACAAGGCAGATGTCTATAGCTTCGGAGTTGTAGCCTTAGAGATTGTCAGCGGAATGAGCAACACAAATTATCGGCCAAAAGAAGAGTTTGTTTATCTTCTAGATTGGGCCTATGTTCTTCAAGAACAAGGAACCCTTCTAGAATTGGTGGATCCAAGTCTTGCTTCAAACTACTCACCAGAAGAAGCCATGAGAATGTTACAATTGGCACTCCTTTGCACCAATCCATCGCCAACTCTTAGACCACCAATGTCATCTGTAGTTAGCATGCTTGAAGGAAATACACCGATTCAAGCGTCAATAATCAAACGCAGCGATAGTACAGCCGGAGCAAGATTTAAAGCCTTTGAACTTCTATCACAAGATAGCCAAACTCATGTTTCTTCAACATTCTTACAAAATAGTAAAGATGGACCATGGATTGACTCTTCTGTATCTTATCCAAGTAAAGATGATTATTCTTCATCTGATAAGCTTATTTGA 3018 0.3873 MFFLMSRSFKHVSLFFFLFIAFSMFGSNSQLLPQDEVKLLQTISDKVHNLNWKVTQRSCNGDKGFGNKIIVGDQITRNVTCDCSFNASTVCHVTMISLKGLNISGVFPSEFGNLTQLTILDLTRNYLNGSIPKSLGRLPLVRMSFLGNRLSGQIPSEIGDIVTLQELNFENNRLEGPLPSSLGNLKNLQRFMLSANNFTGSIPETFGKLKNLTNFRIDGSSLSGKIPSFIGNWTKIERLDLQGTSMEGPIPPAISVLTKLKELRISDLKGQTTMKFPDLKDLQSMTRLELRNCLITGPIPDYIGEMENLKTLDLSSNRLTGPIPDSLQDLDLESINFVFLTNNSLSGTIPGWIVNNKQYFDLSFNNFTDAATSSCQPLDVNLASSVSPSSNTSLSCLKMNLPCSGNPRYHSLFINCGGPATEFEGNEYEADEHLRGISTFFPSDDGKWAYSSTGVFLGNERADYVARNTFSLNINGSAYYQTARIAPISLKYFGLCMMKGNYNVKLHFAEIMFSNDQTYSNLGRRIFDVSIQGFKYLKDFNIMEAAGGVGKGITRDFNVDVNHSTLEIHLSWAGKGTNAIPMRGVYGPLISAITVTPNFKIPSNGLSAGAIVGIVVGSLAVIILILFVLWKMGYIFRKDQTDKELLELKTGYYSLRQIKAATNNFDPENKIGEGGFGPVYKGVLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLVYEYMENNSLARALFGKPEQKLNLDWSTRMKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKNLKAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGMSNTNYRPKEEFVYLLDWAYVLQEQGTLLELVDPSLASNYSPEEAMRMLQLALLCTNPSPTLRPPMSSVVSMLEGNTPIQASIIKRSDSTAGARFKAFELLSQDSQTHVSSTFLQNSKDGPWIDSSVSYPSKDDYSSSDKLI* 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3316 1005 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 71 295 - -
Tpr7g3316 1005 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 383 976 - -
Tpr7g3316 1005 PANTHER - 71 295 - -
Tpr7g3316 1005 PANTHER - 383 976 - -
Tpr7g3316 1005 Gene3D Transferase(Phosphotransferase) domain 1 741 954 - -
Tpr7g3316 1005 SMART LRR_typ_2 306 329 IPR003591 -
Tpr7g3316 1005 SMART LRR_typ_2 185 208 IPR003591 -
Tpr7g3316 1005 SMART LRR_typ_2 114 138 IPR003591 -
Tpr7g3316 1005 Gene3D Ribonuclease Inhibitor 271 380 IPR032675 -
Tpr7g3316 1005 Gene3D - 410 598 - -
Tpr7g3316 1005 ProSiteProfiles Protein kinase domain profile. 665 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3316 1005 Gene3D Ribonuclease Inhibitor 37 163 IPR032675 -
Tpr7g3316 1005 CDD STKc_IRAK 671 938 - -
Tpr7g3316 1005 Gene3D Phosphorylase Kinase; domain 1 632 740 - -
Tpr7g3316 1005 Pfam Protein tyrosine and serine/threonine kinase 668 935 IPR001245 GO:0004672|GO:0006468
Tpr7g3316 1005 SUPERFAMILY L domain-like 81 371 - -
Tpr7g3316 1005 SMART serkin_6 665 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3316 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 787 799 IPR008271 GO:0004672|GO:0006468
Tpr7g3316 1005 ProSiteProfiles Leucine-rich repeat profile. 308 331 IPR001611 GO:0005515
Tpr7g3316 1005 SUPERFAMILY Protein kinase-like (PK-like) 649 937 IPR011009 -
Tpr7g3316 1005 Gene3D Ribonuclease Inhibitor 166 270 IPR032675 -
Tpr7g3316 1005 Pfam Malectin domain 412 593 IPR021720 -
Tpr7g3316 1005 Pfam Leucine Rich Repeat 164 185 IPR001611 GO:0005515
Tpr7g3316 1005 Pfam Leucine Rich Repeat 308 330 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3316 Tpr-Chr7 41220536 41230595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3316 2 996 Receptor kinase-like Gene Family AT1G53440 62.130 0.0 1232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr7g3316 PK_Tyr_Ser-Thr 2.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3316 - - gmx:121173337 1506.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3316 7 41220536 41230595 Tpr7g3316 7 41220536 41230595 ECH