Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3308 ATGGAGAATCGACATCTTTCAAATTGTAGAAAGCAAATTATGGAACAAGAGTTAATTAGAGGACGTGACACAGCAAATCAATTACTTGAAGTAATTGTGAACAAATTGAATATTAATCTTCATCACCATGGAGATTTAGAAGGGTTAATAATACCCTTAGCTCAAGATCTTGTTAACAAGGTACTTAGATCATTCACAAATACTCTTTTTCTTTTGAATACTAATAATGATGTCTTTAGTGATGAGGAGGTTTTGCCTATTACTATCAAAGATTTGTCAAAGTGCCCAAAGCTTGAAGAAACAGATCATGAAGCTTGCAAGAATTTTAAAATTCAAAGGGGGTGCTACAAAAGAAAATCAAATGCAATTACTTGGGAGAAGGATAGCTCAATTTTGATTGAAGATGGCTATGAATGGAGAAAGTATGGACAGAAAAAGATAATGAATGCAAAATATATCAGGAGCTACTACAGATGCAGTTACAAAAATGAACAAGATTGTGCAGCTATGAAACAAGTACAAAGAATTCAAGTGGATCCTCCATTGTACAGAACTACATATTATGGCCATCATAATTGCAAAACCTCAAATTTAGATATCACATCATTGGAACCTAACAATACTTCATCTATGTTCATTAACTTCAATGATAGCTTCCAAACCAAAGAACAATACCCTTCATTTTCATCATCATCATTTTCCAAATCCACAAAACAGGAGCCTATAGAAGTAATCAATATTCCTTATGACCACATTGCTGAAAACCAATTAATCTCATTAGATTACCCTCTATCATGTGATTATGAACTTGAATTTGATTATTTGAGACATGCTACTATGCTATCATCATCATCAACCCAATCTGTTGAATTTCATGATGTTTATTATGAGCCATGCAGTTTGGATTTTGATTCCAAATCATGTTTTGGATTATAG 936 0.3259 MENRHLSNCRKQIMEQELIRGRDTANQLLEVIVNKLNINLHHHGDLEGLIIPLAQDLVNKVLRSFTNTLFLLNTNNDVFSDEEVLPITIKDLSKCPKLEETDHEACKNFKIQRGCYKRKSNAITWEKDSSILIEDGYEWRKYGQKKIMNAKYIRSYYRCSYKNEQDCAAMKQVQRIQVDPPLYRTTYYGHHNCKTSNLDITSLEPNNTSSMFINFNDSFQTKEQYPSFSSSSFSKSTKQEPIEVINIPYDHIAENQLISLDYPLSCDYELEFDYLRHATMLSSSSTQSVEFHDVYYEPCSLDFDSKSCFGL* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3308 311 SMART WRKY_cls 133 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr7g3308 311 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 293 - -
Tpr7g3308 311 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 293 IPR044810 GO:0003700
Tpr7g3308 311 Pfam WRKY DNA -binding domain 134 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr7g3308 311 Gene3D WRKY domain 107 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr7g3308 311 ProSiteProfiles WRKY domain profile. 128 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr7g3308 311 SUPERFAMILY WRKY DNA-binding domain 130 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3308 Tpr-Chr7 41051509 41058421 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3308 12 290 WRKY Transcription Factor Family AT3G56400 31.359 4.11e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr7g3308 WRKY 8.9e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3308 - - gmx:102663141 305.064