Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3305 ATGGAGAATCGACATCTTTCAAATTGTAGAAAGGAAATTATGGAACAAGAGTTAATTAGAGGACGTGACACAGCAAATCAATTACTTGAAGTAATTGAGAACAAATTGAATATTAATCTTCATCACCATGGAGATTTAGAAGGGTTAATAATACCCTTAGCTCAAGATCTTGTTAACAAGGTACTTAGATCATTCACAAATACTCTTTTTCTTTTGAATACTAATAATGATGTCTTTAGTGATGAGGAGGTTTTGCCTATTACTATCAAAGATTTGTCAAAGTGCCCAAAACTTGAAGAAACAGATCATGAAGCTTGCAAGAGTTTTAAAGTTCAAAGAGGCTGCTACAAAAGAAAGTCAGATGCAATTACTTGGGAGAAGGATAGCTCAATTTTGATTGAAGATGGCTATGAATGGAGAAAGTATGGACAAAAAAAAATAATGAAGGCAAAATATCTCAGGTGTATATCTTCAACTTCAATTTTTTATTTTATTTTATTTCTTTCTATGATATTGTCTCCTACAAAACACCGATATACACGGACACCGGACATGACACTTACTTGTCAGCATTGA 576 0.3264 MENRHLSNCRKEIMEQELIRGRDTANQLLEVIENKLNINLHHHGDLEGLIIPLAQDLVNKVLRSFTNTLFLLNTNNDVFSDEEVLPITIKDLSKCPKLEETDHEACKSFKVQRGCYKRKSDAITWEKDSSILIEDGYEWRKYGQKKIMKAKYLRCISSTSIFYFILFLSMILSPTKHRYTRTPDMTLTCQH* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3305 191 SMART WRKY_cls 133 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr7g3305 191 Pfam WRKY DNA -binding domain 134 154 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr7g3305 191 SUPERFAMILY WRKY DNA-binding domain 130 155 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr7g3305 191 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 155 IPR044810 GO:0003700
Tpr7g3305 191 Gene3D WRKY domain 117 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr7g3305 191 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3305 Tpr-Chr7 41013073 41020683 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3305 12 155 WRKY Transcription Factor Family AT3G56400 32.680 2.41e-13 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr7g3305 WRKY 6.9e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3305 - - gmx:102663141 157.532