Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3287 ATGGCTTCATTCCAAACCTTCAACTTTGAAACTCAAATTCCACATGAGCTTCTCATATCTCAAATCATGCAAATTCATGCAACAATTTCTAAGCTAGAATCTCTTAGGCCATCAAAACAAGTCAACACCCTTTTCACTCACTTAGTCAAACTTTGTATTCCCCCTTCATCCATTGACATTGAAACCCTACCTCAAGAGGTTAAGACAATGCGTGAGAGCCTCATCAAACTTTGTGGCAAAGCTGAAGGATTCTTAGAGCTTGAATTCTCAACTTTCATTAACCTCACACCAAACCCAATGAAAAATTTAACACTTTTTCCTTACTATGGAAACTATGTTAAACTAGCAAACTATGAGAACAAAATCCTCAAAGAAAATGGTGTTGTGAATCCAAATAAAGTAGCCTTTATTGGATCTGGTCCAATGCCACTAAGTTCAATTATATTGGCAACTCATCACATGGAATCAACTCAATTTGATAATTTTGATATTGATGAGAAGGCTAATGAAGTTGCTAGCAAGATTGTGGCCTCGGATAAAGCACTTGAAAAGAGGATGAAGTTTGTGACACAAAATATTATGGAAGTGAAAGAGAAATTAGGGCAATATGATTGCATTTTCTTGGCTGCACTTGTTGGTATGAGTAGAGGTGAAAAAATGAAGGTTTTGGGTCATATAAGAAAATATATGAAACAAGGTGGTATTTTGCTTGTAAGAAGTGCAAAAGGGAGTAGAGCTTTTTTGTATCCAATTGTTGATGAGAATGATGTGATGGATTTTGAGGTGCTTACTATTTTTCATCCAACGGATGATGTGATCAACTCGGTTGTTCTTCTTCAAAAGCCTAAAGCTTGA 855 0.3602 MASFQTFNFETQIPHELLISQIMQIHATISKLESLRPSKQVNTLFTHLVKLCIPPSSIDIETLPQEVKTMRESLIKLCGKAEGFLELEFSTFINLTPNPMKNLTLFPYYGNYVKLANYENKILKENGVVNPNKVAFIGSGPMPLSSIILATHHMESTQFDNFDIDEKANEVASKIVASDKALEKRMKFVTQNIMEVKEKLGQYDCIFLAALVGMSRGEKMKVLGHIRKYMKQGGILLVRSAKGSRAFLYPIVDENDVMDFEVLTIFHPTDDVINSVVLLQKPKA* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3287 284 PANTHER NICOTIANAMINE SYNTHASE 1 283 - -
Tpr7g3287 284 Gene3D Vaccinia Virus protein VP39 17 283 IPR029063 -
Tpr7g3287 284 PANTHER NICOTIANAMINE SYNTHASE 3 1 283 IPR004298 GO:0030410|GO:0030418
Tpr7g3287 284 CDD AdoMet_MTases 162 238 - -
Tpr7g3287 284 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 10 284 IPR004298 GO:0030410|GO:0030418
Tpr7g3287 284 Pfam Nicotianamine synthase protein 15 283 IPR004298 GO:0030410|GO:0030418
Tpr7g3287 284 Coils Coil 179 199 - -
Tpr7g3287 284 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 240 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3287 Tpr-Chr7 40676788 40677891 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3287 17 281 Nicotianamine Synthase Gene Family AT5G56080 52.612 2.54e-96 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3287 K05953 - gmx:100819726 460.299