Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3241 ATGCACCGAACCGCCATGACTTGTTTCCCTTTCTCATTCAGCAAGAAATCGTCTTCTTCATTGCCTTCTACAAGACCAAATCTAGACAATGATGAAGATGATATTTCAAGCATTCAAAATGTTAAGATCTATACCTACAAAGAACTAAGGAATGCCACTGATAACTTTAGTGAGGCCAATAAAATTGGAGAGGGTGGTTTTGGTTCCGTCTACATGGGTCGACTTAAAGGTGGAAAACTTGCTGCTATAAAAGTTCTTTCAGCTGAATCAAAGCAAGGTGTGAAGGAGTTCTTGACAGAGATCAATGTGATCTCCGAAATCGAGCATGAAAATTTGGTCAAGTTATATGGTTGTTGTGTGGAAAAAAATAGCAGGATTTTAGTCTACAATTACCTCGAGAATAATAGCCTTTCACGAACTCTTCTAGGTGGAAGTCATGATAGTATCTACTTTGATTGGCAAACACGATGTAGAATAGGTGTTGGGGTTGCACGCGGGCTTGCCTTTCTACACGAAGAAGTCAGGCCTCTTATCATTCATAGGGATATAAAAGCAAGCAATATTCTTCTTGACAAAGACCTTACACCTAAGATTTCCGATTTCGGTCTTGCAAAGCTTATGCCAGCAAATGCGACTCATGTCAGCACACGTGTAGCAGGAACACTAGGTTATTTGGCGCCAGAGTATGCGATAGGAGGAAGACTTACACGAAAAGCAGACATTTACAGTTTCGGTGTCCTCCTTATCGAGATAGTCAGTGGGAGATGCAACACAAATTCGCGACTTCCTATAGAAGAACAGTTCATTCTAGAGAGGACATGGGAACTTTACGAGCGAAAGGAATTAGTTGCGTTGGTAGATACAGCACTAAACGGGGAATTTGACGCCGAGCAGGCAGTTAAATTTCTGAAGATTGGCCTGCTTTGCACTCAGGAATCTCCTAAGTGCCGGCCATCCATGTCTACTGTGGTCAAGATGCTTACTGGAGAGATGGAAGTTGATGACAGTAAGATGACAAAACCTGCCTTAATTTCTGATTTTATGGACCTCAAAGTTAGACATAAACAAGAAAGTATAATCGATACGAGGACTTCATCTTCATATAATACATCGTCTGCCTCAGAGCATCACGACACTACCGTTATATCAGCCGCAACTTCAACCTTCACTACACAACATGATCACAGCATGTAA 1194 0.4154 MHRTAMTCFPFSFSKKSSSSLPSTRPNLDNDEDDISSIQNVKIYTYKELRNATDNFSEANKIGEGGFGSVYMGRLKGGKLAAIKVLSAESKQGVKEFLTEINVISEIEHENLVKLYGCCVEKNSRILVYNYLENNSLSRTLLGGSHDSIYFDWQTRCRIGVGVARGLAFLHEEVRPLIIHRDIKASNILLDKDLTPKISDFGLAKLMPANATHVSTRVAGTLGYLAPEYAIGGRLTRKADIYSFGVLLIEIVSGRCNTNSRLPIEEQFILERTWELYERKELVALVDTALNGEFDAEQAVKFLKIGLLCTQESPKCRPSMSTVVKMLTGEMEVDDSKMTKPALISDFMDLKVRHKQESIIDTRTSSSYNTSSASEHHDTTVISAATSTFTTQHDHSM* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3241 397 ProSiteProfiles Protein kinase domain profile. 56 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3241 397 Gene3D Phosphorylase Kinase; domain 1 27 131 - -
Tpr7g3241 397 SUPERFAMILY Protein kinase-like (PK-like) 33 327 IPR011009 -
Tpr7g3241 397 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 7 386 - -
Tpr7g3241 397 Pfam Protein kinase domain 57 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3241 397 PANTHER - 7 386 - -
Tpr7g3241 397 SMART serkin_6 56 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3241 397 ProSitePatterns Protein kinases ATP-binding region signature. 62 84 IPR017441 GO:0005524
Tpr7g3241 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
Tpr7g3241 397 Gene3D Transferase(Phosphotransferase) domain 1 132 345 - -
Tpr7g3241 397 CDD STKc_IRAK 62 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3241 Tpr-Chr7 40174344 40178087 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3241 44 330 Receptor kinase-like Gene Family AT1G07650 56.597 1.25e-107 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr7g3241 Pkinase 5.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3241 - - gmx:100782320 593.578