Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3235 ATGCCCGAACTCATGAATTCGCATGATCTTCTTTCAGCTAAGATTACATTGGAAGAGTGGAAAGGAAATTATTTTAACACTAACACCAACTTTAGGAAAGTTGCAATCAAAGGATTTTGGAAAATGTATAATCCTGATACAAGCTCTCTTTGGTTTTGTGATTCCAAATACAATGCTGAGAACAGTGTTACCTTTAAGGTTGGTAGATTTGCTGACCAGTATGCATTTGGAAAGATGTTGGTGTTTAGATCAAAGGTGAAGGGATTGTGGCTTTTCAATGGGCAAGCAATCCCAAAAGGTTTGTTTGATGAATGCTATGACATGAAGTTGTATGAATGGACTAAGGTCGACATCTCTGATGAAGCTCAAAAGGCGCGTGTCAATCAGATGATCGAAGATTGTGAGGATTTCGAGGGGGAGACTATTAGGGAGGTTTACTTTAAGTGCTAG 450 0.3889 MPELMNSHDLLSAKITLEEWKGNYFNTNTNFRKVAIKGFWKMYNPDTSSLWFCDSKYNAENSVTFKVGRFADQYAFGKMLVFRSKVKGLWLFNGQAIPKGLFDECYDMKLYEWTKVDISDEAQKARVNQMIEDCEDFEGETIREVYFKC* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3235 149 SMART EF1G_2 1 96 IPR001662 GO:0003746|GO:0006414
Tpr7g3235 149 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 6 148 IPR036433 GO:0003746|GO:0006414
Tpr7g3235 149 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 4 149 IPR001662 GO:0003746|GO:0006414
Tpr7g3235 149 PANTHER BNAC08G13770D PROTEIN 4 144 - -
Tpr7g3235 149 Pfam Elongation factor 1 gamma, conserved domain 10 95 IPR001662 GO:0003746|GO:0006414
Tpr7g3235 149 SUPERFAMILY eEF1-gamma domain 12 144 IPR036433 GO:0003746|GO:0006414
Tpr7g3235 149 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 4 144 IPR044628 GO:0004364
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3235 Tpr-Chr7 40120033 40120698 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3235 6 149 Eukaryotic Initiation Factors Gene Family AT1G57720 59.119 7.03e-54 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3235 K03233 - gmx:100810452 189.119