Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3233 ATGTATATGCAGGAAGATTGGGTTTTGTGTAGGGTGTTCTACAAAAACAGAGAAGTTGCTACAAAACCAAGCATGGGTAGTTGCTATGATGACACAGGATCTTCATCACTTCCAGCATTAATGGATTCTTACATAAGTTTTGATCAAGCTCAATTCCATACAGATGAATTTGAGCAAGTGCCCTGCTTCTCCATTTTTTCTCAAAACCAAACAAACCCTATCTTCAACCATATAACAACCAATAATATGGAACCAAAATTACCTATATCCAACAATAACAATGCAACTACATTTGGAGAAGCACCTTATAGTTTAGACCCTTTATCATGTGATAGAAAAGTTTTAAAAGCTGTTTTGAGTCAACTCTCAAAAATGGAAAGAAACCCTATTAATAATCAAATTCTAAAAGGGTCATCACCAAGCTTAGGAGAAGGAAGTTCTGAAAGTTACTTATCTGATGTGGGTATGCCCCACATGTGGAACAATTACTAA 492 0.3557 MYMQEDWVLCRVFYKNREVATKPSMGSCYDDTGSSSLPALMDSYISFDQAQFHTDEFEQVPCFSIFSQNQTNPIFNHITTNNMEPKLPISNNNNATTFGEAPYSLDPLSCDRKVLKAVLSQLSKMERNPINNQILKGSSPSLGEGSSESYLSDVGMPHMWNNY* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3233 163 PANTHER BNAC05G40360D PROTEIN 3 76 - -
Tpr7g3233 163 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3233 Tpr-Chr7 40110296 40111328 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3233 4 161 NAC Transcription Factor Family AT1G56010 46.784 1.11e-35 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3233 - - gmx:100301890 246.514