Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3229 ATGGCTACCGAAAACACCACCGCAGAAGCCGTTGCCAAAGCCATAGACTCTCTTCTCAAATGGAGAAAATCAAAGCTAGAAACAGAAAAACCAAAACTCTTCGATGAAGACGAAGAATTCGTTTATCTTATTTTAACCCTAAAAAAAATTCCACAAAATAGTCGCGTTAACCCTCACAAAATCCCAATCCCTCATTCCCTCCTCTCCGCCTCATCGGAACAGTGTCTCATCATCGACGACAGAGCCAACAAGCCAGCTCGTCTCACCAAAGACGAAGCTCAGAAGAAGATTCAGTCTGAATCAATTCCTATTTCGAAAGTTCTTAAGGTTACGAAACTCGCTTCCGATTATCGTCCTTTCGAGGCGAAACGAAAGCTTTGTAATTCATATGATCTGTTTTTTGCTGATAAGACTATCGTTCCATTGTTGCCGAGGTTGTTAGGGAAACAGTTTTTCAAGAAGAGGAAGCTTCCAGTGCAAGTTGATTTGAAGAAGATGAATTGGAAGGAGCAGATTGAGAAGGCTTGTTGTTCTGCTTTGATGTTTTTGAGGACTGGGACTTGTAGTGTTCTTAAGGTAGCGAAGTTGACTATGGAGAGAGATCAGATTGTTGAGAATGTGGTTGCTGCGATTGAGGGTGTTGTCGAGGTTTTTCCGAAGAAGTGGGCGGCTGTTAGGTCTTTTCATGTTAAGTTGTTGGATAGTCTTGCTCTGCCTGTTTATCAGTCTGTTCCTGATGTTAAGTTGAAAATTGAGAGTCTTAAGGATTTGGAGGCTGCGTTGGAGAAGGAGGAGAAGAAGGTTCGCGATGGGAAAAATAGGAAGAAGAGTGATAAGAAGAAGGGGAGGATTCATGAGATTAAGCATATGGATGATAAAATGAGCGAGGATGGTACTGATCGTGAGGATGTTACTGATCGTGAGGATGTTGATGGTGATGATATTGATGATGATGTTGTTGATGGTGGTGATTTGTTTGATGATGATGATATTAAGAGTGAAGAATTGGTGAGTAAGAAGGGGAAAAAAGGATTGAAAAAGCGGGATTCTAGTGAGTTGGGAAGTGTGAAATCCTTAAAGGGTTCTGCTAAAAGGACCAAGAAAGATGGGTTGGCTGTGAATGAAGCAGAAGAAGGTTCGATCAAGAAGAGTAGCGAAAAGAGAAAGAAATTATCGGTGAAGGATGAGGGTTCTGATAAGAAGAAAAAGAGGTTGGCTGTGAAAGGTGCAGAAGAAAACTTGATCAAGAAGAGTGAAAAGGTTGAGGATGCAGGTTCGGACAAGAAGAAGAAAAGGGCAGTGGATGTGAAAGCTGCAAAAGAAGCTTTGATCAAGAAGAGCGAAAAGAAATTACCGGTCAAGGAATTCGGTTCGGACAAGAAGACAAAGAGAGCGGATGCACAGGTAAAGGCTAAGAAAACTAAGAGGGTTGTATGA 1437 0.4182 MATENTTAEAVAKAIDSLLKWRKSKLETEKPKLFDEDEEFVYLILTLKKIPQNSRVNPHKIPIPHSLLSASSEQCLIIDDRANKPARLTKDEAQKKIQSESIPISKVLKVTKLASDYRPFEAKRKLCNSYDLFFADKTIVPLLPRLLGKQFFKKRKLPVQVDLKKMNWKEQIEKACCSALMFLRTGTCSVLKVAKLTMERDQIVENVVAAIEGVVEVFPKKWAAVRSFHVKLLDSLALPVYQSVPDVKLKIESLKDLEAALEKEEKKVRDGKNRKKSDKKKGRIHEIKHMDDKMSEDGTDREDVTDREDVDGDDIDDDVVDGGDLFDDDDIKSEELVSKKGKKGLKKRDSSELGSVKSLKGSAKRTKKDGLAVNEAEEGSIKKSSEKRKKLSVKDEGSDKKKKRLAVKGAEENLIKKSEKVEDAGSDKKKKRAVDVKAAKEALIKKSEKKLPVKEFGSDKKTKRADAQVKAKKTKRVV* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3229 478 MobiDBLite consensus disorder prediction 265 313 - -
Tpr7g3229 478 MobiDBLite consensus disorder prediction 337 436 - -
Tpr7g3229 478 MobiDBLite consensus disorder prediction 284 301 - -
Tpr7g3229 478 SUPERFAMILY Ribosomal protein L1 14 241 IPR023674 -
Tpr7g3229 478 Pfam Ribosomal protein L1p/L10e family 19 235 IPR028364 -
Tpr7g3229 478 MobiDBLite consensus disorder prediction 337 354 - -
Tpr7g3229 478 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 7 300 - -
Tpr7g3229 478 MobiDBLite consensus disorder prediction 455 478 - -
Tpr7g3229 478 CDD Ribosomal_L1 11 240 IPR028364 -
Tpr7g3229 478 PANTHER RIBOSOMAL L1 DOMAIN-CONTAINING PROTEIN 1 7 300 - -
Tpr7g3229 478 Gene3D - 85 177 IPR016095 -
Tpr7g3229 478 Coils Coil 247 281 - -
Tpr7g3229 478 MobiDBLite consensus disorder prediction 362 436 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3229 129 231 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 27.184 1.34e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3229 K14775 - gmx:100782862 430.639