LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr7g3229	ATGGCTACCGAAAACACCACCGCAGAAGCCGTTGCCAAAGCCATAGACTCTCTTCTCAAATGGAGAAAATCAAAGCTAGAAACAGAAAAACCAAAACTCTTCGATGAAGACGAAGAATTCGTTTATCTTATTTTAACCCTAAAAAAAATTCCACAAAATAGTCGCGTTAACCCTCACAAAATCCCAATCCCTCATTCCCTCCTCTCCGCCTCATCGGAACAGTGTCTCATCATCGACGACAGAGCCAACAAGCCAGCTCGTCTCACCAAAGACGAAGCTCAGAAGAAGATTCAGTCTGAATCAATTCCTATTTCGAAAGTTCTTAAGGTTACGAAACTCGCTTCCGATTATCGTCCTTTCGAGGCGAAACGAAAGCTTTGTAATTCATATGATCTGTTTTTTGCTGATAAGACTATCGTTCCATTGTTGCCGAGGTTGTTAGGGAAACAGTTTTTCAAGAAGAGGAAGCTTCCAGTGCAAGTTGATTTGAAGAAGATGAATTGGAAGGAGCAGATTGAGAAGGCTTGTTGTTCTGCTTTGATGTTTTTGAGGACTGGGACTTGTAGTGTTCTTAAGGTAGCGAAGTTGACTATGGAGAGAGATCAGATTGTTGAGAATGTGGTTGCTGCGATTGAGGGTGTTGTCGAGGTTTTTCCGAAGAAGTGGGCGGCTGTTAGGTCTTTTCATGTTAAGTTGTTGGATAGTCTTGCTCTGCCTGTTTATCAGTCTGTTCCTGATGTTAAGTTGAAAATTGAGAGTCTTAAGGATTTGGAGGCTGCGTTGGAGAAGGAGGAGAAGAAGGTTCGCGATGGGAAAAATAGGAAGAAGAGTGATAAGAAGAAGGGGAGGATTCATGAGATTAAGCATATGGATGATAAAATGAGCGAGGATGGTACTGATCGTGAGGATGTTACTGATCGTGAGGATGTTGATGGTGATGATATTGATGATGATGTTGTTGATGGTGGTGATTTGTTTGATGATGATGATATTAAGAGTGAAGAATTGGTGAGTAAGAAGGGGAAAAAAGGATTGAAAAAGCGGGATTCTAGTGAGTTGGGAAGTGTGAAATCCTTAAAGGGTTCTGCTAAAAGGACCAAGAAAGATGGGTTGGCTGTGAATGAAGCAGAAGAAGGTTCGATCAAGAAGAGTAGCGAAAAGAGAAAGAAATTATCGGTGAAGGATGAGGGTTCTGATAAGAAGAAAAAGAGGTTGGCTGTGAAAGGTGCAGAAGAAAACTTGATCAAGAAGAGTGAAAAGGTTGAGGATGCAGGTTCGGACAAGAAGAAGAAAAGGGCAGTGGATGTGAAAGCTGCAAAAGAAGCTTTGATCAAGAAGAGCGAAAAGAAATTACCGGTCAAGGAATTCGGTTCGGACAAGAAGACAAAGAGAGCGGATGCACAGGTAAAGGCTAAGAAAACTAAGAGGGTTGTATGA	1437	0.4182	MATENTTAEAVAKAIDSLLKWRKSKLETEKPKLFDEDEEFVYLILTLKKIPQNSRVNPHKIPIPHSLLSASSEQCLIIDDRANKPARLTKDEAQKKIQSESIPISKVLKVTKLASDYRPFEAKRKLCNSYDLFFADKTIVPLLPRLLGKQFFKKRKLPVQVDLKKMNWKEQIEKACCSALMFLRTGTCSVLKVAKLTMERDQIVENVVAAIEGVVEVFPKKWAAVRSFHVKLLDSLALPVYQSVPDVKLKIESLKDLEAALEKEEKKVRDGKNRKKSDKKKGRIHEIKHMDDKMSEDGTDREDVTDREDVDGDDIDDDVVDGGDLFDDDDIKSEELVSKKGKKGLKKRDSSELGSVKSLKGSAKRTKKDGLAVNEAEEGSIKKSSEKRKKLSVKDEGSDKKKKRLAVKGAEENLIKKSEKVEDAGSDKKKKRAVDVKAAKEALIKKSEKKLPVKEFGSDKKTKRADAQVKAKKTKRVV*	479

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr7g3229	478	MobiDBLite	consensus disorder prediction	265	313	-	-
	Tpr7g3229	478	MobiDBLite	consensus disorder prediction	337	436	-	-
	Tpr7g3229	478	MobiDBLite	consensus disorder prediction	284	301	-	-
	Tpr7g3229	478	SUPERFAMILY	Ribosomal protein L1	14	241	IPR023674	-
	Tpr7g3229	478	Pfam	Ribosomal protein L1p/L10e family	19	235	IPR028364	-
	Tpr7g3229	478	MobiDBLite	consensus disorder prediction	337	354	-	-
	Tpr7g3229	478	PANTHER	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	7	300	-	-
	Tpr7g3229	478	MobiDBLite	consensus disorder prediction	455	478	-	-
	Tpr7g3229	478	CDD	Ribosomal_L1	11	240	IPR028364	-
	Tpr7g3229	478	PANTHER	RIBOSOMAL L1 DOMAIN-CONTAINING PROTEIN 1	7	300	-	-

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr7g3229	129	231	Cytoplasmic Ribosomal Protein Gene Family	AT2G27530	27.184	1.34e-07	50.4

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr7g3229	K14775		-	gmx:100782862	430.639

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