Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3214 ATGTACTGGATGAGGAAAAGAAATCAAAAAAGATCTTTTGATTCACCAACAATTGAACAACTAACTAAGGTTTCATACAAAGAATTGCATCAAGGAACAAATGGGTTCTCACCTACAAACTTGATCGGATCAGGAGGTTTTGGTTCCGTGTACAAAGCAAATCATGTGTCGGAAGATCATGTTGTTGCCGTAAAGGTTTTGAACCTCCAAAAAAAGGGAGCTCGCAAGAGTTTTATTGTTGAATGTAATGCACTCAAAAATATTAGACACCGAAATTTAGTTGAGGTTTTAACATGTTCTAGTACAGAGTACAAAGGTAAAGAATTCAAAGCTCTAGTTTTCGATTACATGAAAAATGGAAGCTTAGAACAATGGTTACATGAAAATGAAGAGAATCCAACAACATTGGGCCTTGGTCAAAGATTAAACATAATTATCGATGTTGTTTATGCATTACATTATCTTCACCAAGAATGTGAGCAATTGGTCCTTCATTGTGATCTAAAGCCAAACAACGTCCTTATTGATGATGACATGGTTGCTCATGTGAGTGATTTTAGATTTTGGAATAGCAAGACTTGTCTTAGCCATTGGCAGCAGCTCTCAGAAGGATACTAG 618 0.3608 MYWMRKRNQKRSFDSPTIEQLTKVSYKELHQGTNGFSPTNLIGSGGFGSVYKANHVSEDHVVAVKVLNLQKKGARKSFIVECNALKNIRHRNLVEVLTCSSTEYKGKEFKALVFDYMKNGSLEQWLHENEENPTTLGLGQRLNIIIDVVYALHYLHQECEQLVLHCDLKPNNVLIDDDMVAHVSDFRFWNSKTCLSHWQQLSEGY* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3214 205 SUPERFAMILY Protein kinase-like (PK-like) 10 187 IPR011009 -
Tpr7g3214 205 Gene3D Phosphorylase Kinase; domain 1 17 116 - -
Tpr7g3214 205 PANTHER OS04G0122200 PROTEIN 2 187 - -
Tpr7g3214 205 PANTHER LRR RECEPTOR-LIKE KINASE 2 187 - -
Tpr7g3214 205 ProSitePatterns Protein kinases ATP-binding region signature. 42 65 IPR017441 GO:0005524
Tpr7g3214 205 Gene3D Transferase(Phosphotransferase) domain 1 117 199 - -
Tpr7g3214 205 ProSiteProfiles Protein kinase domain profile. 36 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3214 205 Pfam Protein kinase domain 39 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3214 205 SMART serkin_6 36 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3214 205 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3214 Tpr-Chr7 39882313 39885163 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3214 1 186 Receptor kinase-like Gene Family AT3G47570 53.571 2.48e-66 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr7g3214 Pkinase 9.3e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3214 - - mtr:MTR_5g025930 301.982