Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3204 ATGGAAGATGGTCTTGAAATTGCGGTGAAAAGACTCTCAAAAGCATCTGGACAAGGAATAGAAGAATTCATGAATGAAGTTTTAGTGATTTCAAAACTTCAACATCGAAATCTTGTAAGACTTCTTGGTTGTTGTGTTGAAAAGGGCGAGCAAATTTTGGTTTATGAGTTCATGCCAAATAAGAGTTTGGATGCCTTTCTCTTTGATCCACTACAAAAGAAAATTTTAGATTGGAGAAAGAGGTCAAACATAATCGAAGGAATAGCTCGAGGTATACTCTATCTTCATAGAGATTCAAGACTAAGGATCATACATAGAGATTTGAAAGCCAGCAACATCTTACTTGATGTCGACATGATTCCAAAAATATCAGACTTTGGTTTAGCTAGAATAGTTAAAGGTGGAGAAGATAACGAAGCTAACACAAACAGGGTTGTTGGAACATATGGTTATATGCCGCCTGAATATGCAATGGAGGGACTTTTCTCTGAGAAATCAGATGTCTATAGCTTTGGGGTTTTATTGCTAGAGATTGTTAGCGGAAGGAGAAATAGTAGCTTTTATAACAACGAGGATTCTCTTAGTCTTGTAGGCTTTGCATGGAAGTTATGGTTAGAGGACAACATTATATCTCTAATAGATCCGGAAGTATGGGATGCATGCGTTGAGAGAAACATGTTGAGGTGCATACACATAGGACTTTTATGTGTGCAAGAACTTCCAAGAGAAAGACCAAATATATCAACTGTAGTTTTAATGCTCATAAGTGAGATTACACATCTTCCTCCTCCAGGAAAAGTTGCATTTGTTCATAGACAAAATTCTAAAAGTACAGAATCTTCACAAAAAAGTCATCAATCTAACTCAATCAACAATGTAACTCTGAGTGAAGTTCAAGGCAGATAA 906 0.3631 MEDGLEIAVKRLSKASGQGIEEFMNEVLVISKLQHRNLVRLLGCCVEKGEQILVYEFMPNKSLDAFLFDPLQKKILDWRKRSNIIEGIARGILYLHRDSRLRIIHRDLKASNILLDVDMIPKISDFGLARIVKGGEDNEANTNRVVGTYGYMPPEYAMEGLFSEKSDVYSFGVLLLEIVSGRRNSSFYNNEDSLSLVGFAWKLWLEDNIISLIDPEVWDACVERNMLRCIHIGLLCVQELPRERPNISTVVLMLISEITHLPPPGKVAFVHRQNSKSTESSQKSHQSNSINNVTLSEVQGR* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3204 301 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 300 - -
Tpr7g3204 301 MobiDBLite consensus disorder prediction 271 291 - -
Tpr7g3204 301 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 1 300 - -
Tpr7g3204 301 ProSitePatterns Serine/Threonine protein kinases active-site signature. 103 115 IPR008271 GO:0004672|GO:0006468
Tpr7g3204 301 CDD STKc_IRAK 1 254 - -
Tpr7g3204 301 ProSiteProfiles Protein kinase domain profile. 1 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3204 301 Pfam Protein tyrosine and serine/threonine kinase 4 250 IPR001245 GO:0004672|GO:0006468
Tpr7g3204 301 SUPERFAMILY Protein kinase-like (PK-like) 2 287 IPR011009 -
Tpr7g3204 301 PIRSF TyrPK_CSF1-R 229 299 - -
Tpr7g3204 301 PIRSF TyrPK_CSF1-R 72 185 - -
Tpr7g3204 301 PIRSF TyrPK_CSF1-R 2 73 - -
Tpr7g3204 301 Gene3D Phosphorylase Kinase; domain 1 1 57 - -
Tpr7g3204 301 SMART serkin_6 1 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3204 301 Gene3D Transferase(Phosphotransferase) domain 1 58 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3204 Tpr-Chr7 39792791 39795005 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3204 1 269 Receptor kinase-like Gene Family AT4G23230 61.338 1.51e-116 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr7g3204 PK_Tyr_Ser-Thr 1.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3204 - - gmx:100786846 502.671