Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3178 ATGGTTGAACCAAGTTCACTTTTGTTCTTCTTCACACTTCAGCTATCGGTAACAGTTGTAATTTCAGCTAAATTCACTATAATTAACCAATGCAACAACACAGTATGGCCAGCTTCATATAACACAAGTGGAAATGCAATCCTTGCAACCACCGGATTCAATTTAACATCGGGTGAGAATTCAACAATCATGGCACCGGCCAAATGGAGCGGCCGTATCTGGGGTCGGTCCCTTTGCGATGGAAACTTCTCCTGCGTCACAGGCGATTGTGGATCCGGCAAATTAGTGTTGGTAGTATGTAACAAGCGAAGTGAATTACCACTTGTGACGTTAGCAGAATTCACTTGGAATGGTTTTAACGATCAAAATTTGTATAATGTCAGCTTACTAGACGGTTATAACGTTCCAATGGATGTGGTTCCGTTAGGTGGTTCTGGAAAGTGTAACAGTACAGGTTGTTCTACGGATTACAATGTTGTCTTTTGTCCTACCTCCAATAATGTCAGATTAGGATCATTGGATCAAGGTGGAATTGTGAGTGTTGGTGAGTCACTTACTGCTGGCAGTGAGACAGCCTCATGGCTCTCTTCTTCAGGAGATTTTGCATTTGGATTTTACCAAATTCCTGATGAACTTTTCCTTCTAGCTATATGGTATGCCAATATACAAAATGATTCCATCATTTGGTATGCAAATGGAGACAACCCTGCTCCTATAGGATCAACATTGGTATTAAATAATTCTAGTGGATTGGTTCTCACCAACCCCCAAGGTCTAGAGCTATGGAGATCAGATTTCACGTCAGGTACGATTTCTAATGGTATAATGAATGATGTCGGAAACTTTCAATTGCGAGATAAAAATTCATTTGCAATCTGGGACAGTTTCAGTCATCCAACTGACACATTACTTCCTAATCAAGTAATGGAATTAAATGGAAGTCTTTCTTCGCGACAAGGAGTATTTAACTTCTCGCGTGGAAGGTTCAAACTTCAATTACAAGATGATGGAAATCTTGTGCTCAACCTTGTAAATTTGCCAAGTAACTATAGTTATGATCCTTACTATAGTTCTGACACCAATAGTGATGATAAGAATCAATCAAATGTTGGCCAGCGTTTGATATTTGACAAATCGGGTTTCTTATACATAGAGAGAAAAGGAGGGGAGAACTTTTCTATCAGTAGCCCAAATGCGGCATTCTCAACTAATGATTTCTACTACAAAGCAACAATGAATTATGACGGAGTTTTCACTATAGCATCGTACCCTAAAGATCAAACAACAGGACACGGTTGGGTCATGGCAAAGACAATACCAGAAAACATATGCTTGTATTCTTCATTCCGAGATGAAGGTGTATGTGGGTTTAATAGCATTTGCACCCTTACAAATGATCAAAGGCCGAATTGTACATGTCCAGATAAATATTCCCTAATTGATTCAAATAACATGTATGCCGGTTGCATACCGAATTTTCAAGTTATTTGTCAAGCAGGTGGGAATTGGGGTTCAAAAGATGATCTATATACAATGAAGGAATTGCCAAATACTGATTGGCCTCAATCTGATTATGAAAAAATAAGCCCGTCTAGTTTACAAGAATGTAAGGAATCTTGTTTGCACGATTGCTTATGTGTATTGGCTCATTTCGATCAAAGTTCCTGTTGGAAAAAGAAGCTCCCGGTTTCTTATGGAAGAAATGATCAAACCGTAAAAGGAATTTCTATAATAAAATTGATGAAAATTGATCATTCGTCCTCCTTGTCAAATGAGAAGAAAGATCATGATACTTTGATAATTGTGATTTTAGTTCTTTTGGGAAGCTCTGTCTTTGTCATTTTAACCTTGTTAGGTATAATGTTTTTGAGGTTTCGTTACAACCGCAAAAAGATCAGTAGTAGTAGAAACAACCATAGTAATTTTGTTAACAATAACTTGCGCAATTTTAGCTTTAAGGAAATCATCGAAGCAACAAGTAACTTTAGAGAAGAGTTAGGAAGAGGATCTTGTAGCATTGTGTACAAGGGAACAATCGAGATGATAATCAATGTGGCAGTTAAGAAACTAGATAAGTTGATCCAAGATAGTGATAAGGAGTTTCAAACTGAAATGAGTGTGATAGGTCAAACTCATCATATAAATCTCGTTCGACTTGTTGGTTATTGTAACGAGGGACAACATCGGATTTTGGTATATGAGTTAATGACCAATGGCACTTTAGCAAGCTTTCTTTTCACCCCTTTAAAGCCAAATTGGAACCAAAGAGTCCACATTGCTCTTGGGATTGCAAGAGGTCTTGTTTATTTACATGAGGGATGTTGCACTCAAATCATCCATTGTGATATAAAACCCCAAAATATACTTCTAGATGATCAACACAATACTAGGATTTCAGATTTTGGACTAGCAAAGCTACTATTGATTAATCAAAGCCACACTGAAACTGGAATTAGAGGAACCAAAGGGTATGTTGCACCAGATTGGTTTAGGAGTTCTCCAATAAGTGCAAAGGTTGACACTTATAGTTTTGGTGTATTGTTGTTAGAGATTATTTGTTGTAGAAAAAATGTAGAAAAAGAATTTTTCACTGAAGAAAAGGGGATTTTAACTGATTGGTCTTATGATTGCTATAAGAATAAAAGACTTGACATTCTTCTAGAAAGTGATAATGAGGTTGGCAGTGCCATGATGAGTTTGGAAAAGTTGGTCATGATTGTTATATGGTGCATTCAAGAAGATCCTTCTTTTAGGCCAACAATGAAAGAGGTTTTACTGATGTTAGAGGGAAATGTTGAAGTTGTGGTTCCCCAAAGTCCCTATCTTTATGGTTCTGTAACATTGTAA 2847 0.3727 MVEPSSLLFFFTLQLSVTVVISAKFTIINQCNNTVWPASYNTSGNAILATTGFNLTSGENSTIMAPAKWSGRIWGRSLCDGNFSCVTGDCGSGKLVLVVCNKRSELPLVTLAEFTWNGFNDQNLYNVSLLDGYNVPMDVVPLGGSGKCNSTGCSTDYNVVFCPTSNNVRLGSLDQGGIVSVGESLTAGSETASWLSSSGDFAFGFYQIPDELFLLAIWYANIQNDSIIWYANGDNPAPIGSTLVLNNSSGLVLTNPQGLELWRSDFTSGTISNGIMNDVGNFQLRDKNSFAIWDSFSHPTDTLLPNQVMELNGSLSSRQGVFNFSRGRFKLQLQDDGNLVLNLVNLPSNYSYDPYYSSDTNSDDKNQSNVGQRLIFDKSGFLYIERKGGENFSISSPNAAFSTNDFYYKATMNYDGVFTIASYPKDQTTGHGWVMAKTIPENICLYSSFRDEGVCGFNSICTLTNDQRPNCTCPDKYSLIDSNNMYAGCIPNFQVICQAGGNWGSKDDLYTMKELPNTDWPQSDYEKISPSSLQECKESCLHDCLCVLAHFDQSSCWKKKLPVSYGRNDQTVKGISIIKLMKIDHSSSLSNEKKDHDTLIIVILVLLGSSVFVILTLLGIMFLRFRYNRKKISSSRNNHSNFVNNNLRNFSFKEIIEATSNFREELGRGSCSIVYKGTIEMIINVAVKKLDKLIQDSDKEFQTEMSVIGQTHHINLVRLVGYCNEGQHRILVYELMTNGTLASFLFTPLKPNWNQRVHIALGIARGLVYLHEGCCTQIIHCDIKPQNILLDDQHNTRISDFGLAKLLLINQSHTETGIRGTKGYVAPDWFRSSPISAKVDTYSFGVLLLEIICCRKNVEKEFFTEEKGILTDWSYDCYKNKRLDILLESDNEVGSAMMSLEKLVMIVIWCIQEDPSFRPTMKEVLLMLEGNVEVVVPQSPYLYGSVTL* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3178 948 SUPERFAMILY alpha-D-mannose-specific plant lectins 213 360 IPR036426 -
Tpr7g3178 948 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 144 947 - -
Tpr7g3178 948 Gene3D - 300 446 - -
Tpr7g3178 948 ProSiteProfiles Bulb-type lectin domain profile. 170 297 IPR001480 -
Tpr7g3178 948 ProSiteProfiles Protein kinase domain profile. 660 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3178 948 SMART tha2 25 163 IPR001938 -
Tpr7g3178 948 SUPERFAMILY Osmotin, thaumatin-like protein 23 163 IPR037176 -
Tpr7g3178 948 Pfam D-mannose binding lectin 227 313 IPR001480 -
Tpr7g3178 948 ProSiteProfiles Thaumatin family profile. 22 162 IPR001938 -
Tpr7g3178 948 SMART blect_4 176 299 IPR001480 -
Tpr7g3178 948 Pfam Protein kinase domain 663 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3178 948 PRINTS Pathogenesis-related protein signature 24 36 IPR001938 -
Tpr7g3178 948 PRINTS Pathogenesis-related protein signature 72 83 IPR001938 -
Tpr7g3178 948 PRINTS Pathogenesis-related protein signature 123 139 IPR001938 -
Tpr7g3178 948 Gene3D - 178 298 IPR036426 -
Tpr7g3178 948 Gene3D Transferase(Phosphotransferase) domain 1 736 936 - -
Tpr7g3178 948 SUPERFAMILY Protein kinase-like (PK-like) 638 929 IPR011009 -
Tpr7g3178 948 Pfam Thaumatin family 29 168 IPR001938 -
Tpr7g3178 948 ProSitePatterns Serine/Threonine protein kinases active-site signature. 778 790 IPR008271 GO:0004672|GO:0006468
Tpr7g3178 948 Gene3D Thaumatin 23 163 IPR037176 -
Tpr7g3178 948 SMART serkin_6 660 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3178 948 Gene3D Phosphorylase Kinase; domain 1 625 735 - -
Tpr7g3178 948 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 144 947 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3178 Tpr-Chr7 39430021 39437708 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3178 604 933 Receptor kinase-like Gene Family AT5G45780 40.413 6.02e-67 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tpr7g3178 Pkinase 2.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3178 - - mtr:MTR_2g067980 1284.63