Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3176 ATGGTTGAGCCAATTTCACTGTTGTTCTTCTTCACACTTCACCTATCAGTGGTAACATCAGCGAAATTTACTATAATTAATCAATGCAATTACACGGTGTGGCCAGCTTCATATACCACCGGATTCATTTTGAAACCCGGTGAGAATTCAACAATCACGGTGCCGGCTAAATGGACTGGCCGTTTCTGGGGCCGGACACTCTGCACAACAGATTCCACCACCGGGAACTTCTCCTGCGTCACAGGCGATTGTGGATCCGGCAAGTTAGCATGTGCTGGCCGCAGTGGATCACTGCCTGTGACACTGGCGGAGTTCACTTTGAACGGTGCCAATGATCAAGATTTTTATGATGTCAGCTTAGTAGACGGTTATAATGTTCCGATGGATGTGATTCCGTTAGATGGTTCTGGAAAGTGTAATAGTACCGGTTGTTCTACGGATTTGAACGCAGTGTGTCCAACAGAGTTGAAGGTAACAGAAAATGGGACAGTTGTGGCCTGCCAAGGTCCTTGTGCTGCATTTAATTTGCAGTTTTTTTGTTGTGTTGGGAATCATTCAACTCAAGAAACTTGTGAGCCGAGTGTGTATGCTCAGATATTCAAGACGTCGTGTCCTCGAGCTTATAGCTATGTGTATGACGATAAAAGTAGTACGTTCACTTGTCCGGCTACCGATTACCAAGTCGTCTTTTGTCCTGCCTCCAAAAATGCCAGCTTAGAATCATTGGATCAAGATGGAAGTGTAAGTGTTGGTGAGTCACTTATTGCTGGCAGTGGGACAACTCGATGGCTATCTCCTTCAGGAGATTTTGCATTTGGGTTTTATCAACTTCCCAATGAGCTTTTCTTATTAGCTATATGGTATGTCAACATACAAACTGATGCAATCATTTGGTATGCAAATGGAGACAACCCTGCTCCAAAGGGATCAAGATTAGTATTAAACGATTCTCGTGGCTTAGTGCTCACTAACCCTCAAGGTTCAGAACTATGGAGATCATATTTCACATCAGGTACAATTTCTAACGGTATAATGAATAATGCCGGAAACTTTCAGTTGCGAGATAAAAATTCTGTGGCAATCTGGGATAGTTTCAGTTATCCTACTGACACATTACTTCCTACTCAAGCATTGGAATTAAATGGAAGTCTTTCTTCGCGGCAAGGAGCATTCAACTTCTCGTATGGAAGGTTCAAACTTCACTTACATGAGGATGGAAATCTTGTGCTCAACCTTATAAATCTTCCAAGTAACTATAGTTATGATCCTTACTATAGTTCTGACACCAATAGTGGCAATAAGAATCAATCAAATGTTGGCCAGCGTTTGATGTTTGACAAATCAGGTTTCTTATACATAGAGAGAAAAGGAGGGGAGAACTTTTCTATCAGCTCAAATGTGTCATTGTCAACTAATGATTACTACTGCAAAGCAACAATTAATTATGACGGAGTTTTCACCGTAGCATTTTACCCTAAAGATCCAAAAAGAGGACAAAGTTGGGTCGTTGCAAAGACTGTACCAGAAAACATTTGCTTGTATTCTACATTCGCAGACGGTGAAGGGGTTTGTGGGTATAATAGCATTTGCACTCTTACAAATGACCAAAGGCCAAATTGTACTTGCCCTGATGGATATTCTATAATTGATTCGAATAACGTGTATGCTGGTTGCATACCGAATTTTCAAGTCATTTGTCAAGCTGGTGGGAATTGGGGTTCACAAGATGATCTATATACAATGAAGGAATTGCCAAATACTGATTGGCCTAAATCTGATTATGAAATAATCAGTCCGTCTAGTTTAGAAGAGTGTAAGGAATCATGTTTGCAAGATTGCTTATGTGTTTTGGTTTCTTTCAATGAAAGTTCTTGCTGGAAGAAGAAGCTCCCACTATCTTATGGAAGAAGTGATCAGGTAGTAAAAGGAATTTCTGTCATGAAATTGATGAAAAATGATCCTTTGTCTACTTTGACAAATGAGAAAAAAGATCATGATACTTTGATCATTGTGATTTCAGTTCTTTTGGGAAGCTCTGTGTTTGTTATTTTGACATTGCTTGGGGTAATGTTTTTTGGGTTTCCTTACAACCGCAGGAAGATCAAACATCGTAGAACCAACCAAAATGTTGTTGACAATAACTTGCGCAATTTTACCTTCAAGGAAATAGTTGAAGCAACAAGTAACTTTAGAGAAGAATTAGGAAGAGGTTCTTGTAGCATTGTCTACAAAGGAACAATAGACAAGATGATCAATGTAGCGGTTAAGAAACTAGATAAGTTGCTCCAAGATAGTGATAAGGAATTTCAGACTGAAATGAGTGTGATAGGCCAAACTCATCATAGGAATCTTGTTCGTCTTCTTGGATATTGCAAAGAGGGACAACATCGGATTTTGGTATATGAGTTAATGAGTAATGGAACTTTGGCAAACTTTCTTTTCGTCCCTTCAAAACCAAATTGGAACGATCGAGTCAACATTGCCCTTGGGATTGCTAGAGGTCTTGTTTACTTGCATGAAGGATGTTGCACCCAAATCATCCATTGTGATATAAAGCCGCAAAATATACTTCTAGATGATCAATACAATGCTAGGATTTCAGATTTTGGACTAGCAAAGCTACTGTTGATTAATCAAAGTCACACTGAAACTGGAATTAGAGGAACCAAAGGGTATGTTGCACCAGATTGGTTTAGGAGTGCACCGATCACTACAAAAGTCGATACTTATAGTTTTGGTGTATTGTTGCTAGAGATAATTTGTTGTAGGAAAAATGTAGAGAAAGATTTTATTGCGGAAGAAAAAGGGATTTTAACCGATTGGGCTTATGATTGCTATAAGACTAGAAGACTTGACAATCTTCTTGAAAACGATAATGACGTCGGCAATGACAAGATGAGCTTGGAAAAGTTAGTCATGATTGTTATTTGGTGCATTCAAGAAGATCCTTCTCTTAGGCCGACAATGAAGGAGGTTTTACTAATGTTAGAAGGATTTGTTGAAGTTGTGGTTCCCCCAAGTCCATATCTCTATGGTTCTGTAAGTTGTAATTAA 3054 0.3926 MVEPISLLFFFTLHLSVVTSAKFTIINQCNYTVWPASYTTGFILKPGENSTITVPAKWTGRFWGRTLCTTDSTTGNFSCVTGDCGSGKLACAGRSGSLPVTLAEFTLNGANDQDFYDVSLVDGYNVPMDVIPLDGSGKCNSTGCSTDLNAVCPTELKVTENGTVVACQGPCAAFNLQFFCCVGNHSTQETCEPSVYAQIFKTSCPRAYSYVYDDKSSTFTCPATDYQVVFCPASKNASLESLDQDGSVSVGESLIAGSGTTRWLSPSGDFAFGFYQLPNELFLLAIWYVNIQTDAIIWYANGDNPAPKGSRLVLNDSRGLVLTNPQGSELWRSYFTSGTISNGIMNNAGNFQLRDKNSVAIWDSFSYPTDTLLPTQALELNGSLSSRQGAFNFSYGRFKLHLHEDGNLVLNLINLPSNYSYDPYYSSDTNSGNKNQSNVGQRLMFDKSGFLYIERKGGENFSISSNVSLSTNDYYCKATINYDGVFTVAFYPKDPKRGQSWVVAKTVPENICLYSTFADGEGVCGYNSICTLTNDQRPNCTCPDGYSIIDSNNVYAGCIPNFQVICQAGGNWGSQDDLYTMKELPNTDWPKSDYEIISPSSLEECKESCLQDCLCVLVSFNESSCWKKKLPLSYGRSDQVVKGISVMKLMKNDPLSTLTNEKKDHDTLIIVISVLLGSSVFVILTLLGVMFFGFPYNRRKIKHRRTNQNVVDNNLRNFTFKEIVEATSNFREELGRGSCSIVYKGTIDKMINVAVKKLDKLLQDSDKEFQTEMSVIGQTHHRNLVRLLGYCKEGQHRILVYELMSNGTLANFLFVPSKPNWNDRVNIALGIARGLVYLHEGCCTQIIHCDIKPQNILLDDQYNARISDFGLAKLLLINQSHTETGIRGTKGYVAPDWFRSAPITTKVDTYSFGVLLLEIICCRKNVEKDFIAEEKGILTDWAYDCYKTRRLDNLLENDNDVGNDKMSLEKLVMIVIWCIQEDPSLRPTMKEVLLMLEGFVEVVVPPSPYLYGSVSCN* 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3176 1017 CDD TLP-PA 22 231 - -
Tpr7g3176 1017 ProSitePatterns Thaumatin family signature. 75 91 IPR017949 -
Tpr7g3176 1017 Gene3D - 369 502 IPR036426 -
Tpr7g3176 1017 SMART tha2 23 232 IPR001938 -
Tpr7g3176 1017 Gene3D Phosphorylase Kinase; domain 1 692 803 - -
Tpr7g3176 1017 ProSiteProfiles Protein kinase domain profile. 728 1000 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3176 1017 ProSiteProfiles Thaumatin family profile. 20 232 IPR001938 -
Tpr7g3176 1017 ProSitePatterns Serine/Threonine protein kinases active-site signature. 846 858 IPR008271 GO:0004672|GO:0006468
Tpr7g3176 1017 Pfam Thaumatin family 27 232 IPR001938 -
Tpr7g3176 1017 SUPERFAMILY alpha-D-mannose-specific plant lectins 282 429 IPR036426 -
Tpr7g3176 1017 SMART blect_4 253 368 IPR001480 -
Tpr7g3176 1017 PRINTS Pathogenesis-related protein signature 22 34 IPR001938 -
Tpr7g3176 1017 PRINTS Pathogenesis-related protein signature 61 72 IPR001938 -
Tpr7g3176 1017 PRINTS Pathogenesis-related protein signature 114 130 IPR001938 -
Tpr7g3176 1017 PRINTS Pathogenesis-related protein signature 222 231 IPR001938 -
Tpr7g3176 1017 Pfam D-mannose binding lectin 296 382 IPR001480 -
Tpr7g3176 1017 Gene3D Thaumatin 21 232 IPR037176 -
Tpr7g3176 1017 Gene3D - 244 367 IPR036426 -
Tpr7g3176 1017 Pfam Protein kinase domain 731 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3176 1017 SMART serkin_6 728 1000 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3176 1017 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 156 1017 - -
Tpr7g3176 1017 ProSiteProfiles Bulb-type lectin domain profile. 239 366 IPR001480 -
Tpr7g3176 1017 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 156 1017 - -
Tpr7g3176 1017 Gene3D Transferase(Phosphotransferase) domain 1 804 1003 - -
Tpr7g3176 1017 SUPERFAMILY Osmotin, thaumatin-like protein 22 232 IPR037176 -
Tpr7g3176 1017 SUPERFAMILY Protein kinase-like (PK-like) 710 997 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3176 Tpr-Chr7 39416522 39421021 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3176 656 1001 Receptor kinase-like Gene Family AT5G45780 38.983 2.07e-72 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tpr7g3176 Pkinase 1.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3176 - - mtr:MTR_2g067980 1761.12