Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3175 ATGGGTTTAATGAAGGATGATGGAAATTTTCAATTACGAGACCAAAACTTTGTTGTATTATGGCAGAGTTTCAATCATTTTACTGATACATTACTTCCTGGTCAAGTATTGAATTCAAAGAATTGTCTTTATTCTCGACAAGGAGAATTCAACTTCTCGCGAGGAATGTTTGAACTTCGTCTAGAAAAAGATGGACATGGTTTGCTCCTCAACCTTATAAATTCTCCTTCAAATACATACTACAGTACTCAACATGATGCTTACTATGAAAGTCGCATTGTTTATCCATATAATGAACCGTTGGATGTTGGCGACAAATTAATATTTGACAAAGATTATTTCTCCTTATACATACTTATTAAAGAGAATGGGAAGCATATTCCTATCACCAATTCAAAAAACTATGTTTCAAATGGTAACTACTACTATAAAGCCACTATCAATCATGATGGAGTTTTTACCCTTTCATATTACCCTAGAAATCCAACAAATGTTCAGCGTTGGATAGTTGCAAAGACAATACCTGAGAACATTTGTTTGAATTCTACATCTAACAATGGTATTTGTGGGTTAAATAGCATTTGCAGCCTTAGAGATGATCAAAGGCCAAAGTGTACATGTCAAGAAGGATATTCTCTAATTGATTCAAACAACATGTATGGTGGTTGCATACCAAATTTCCAAGTTAATATTTGTCAATGTAGGCATCAAGGGTCACAAAATGATACACAAATTATGAGGAATTTGTCCAACACTTATTCGCCTAAATTTGATTATCAACCATTGAGTACTTGTACATTACAAGAATGCAAGGAATATTGTATGCAAGATGGCTGGTGTGTGTTGGTTTTTGTCAATGAAAGTTCTTGCTGGAAAAATAAGCTACCACTCTCACATGGGAGAAAAGATTTGTCAATGAAAGGAACTTCTATCATAAAAATAAGGAGAAATGATACTCTATCAATCCTTTCCAATGTGATTAAAGATAATGTTCATAATAACACCAAAAAGATGAGAGATTATGGTTCTTTGATGATTGTGATGTCAATTATTTTGGGATTCTCCATTGTTATAATTATAGCATTGTGTGGTCCAATTTGTTTTTGGCACAACCACAAGAAGATAAAAAGTAGTGCAACCAACATAAGTGTTGTTGACAGAAATTTGAGAATTTTTACTTACAAGGAAATTACGGAAGCAACAAACAACTTTAGAGAAGAACTAGGAAGGGGGTCTTGTAGCATTGTATACAAAGGAACAATTGATGTGGATATGAATGTGGCTGTTAAGAAATTGGACAAGTTGTTTCAAGATAGTGATAAGGAATTTCAGACTGAAATGAATGTGATAATCGAAACTCATCATAGGAACCTTGTTCGTCTTCATGGGTATTGTAGCGAGGAACAACACAGGGTTTTGGTGTATGAGTTAATGAGTAATGGTACTCTAGCAAGCTTCCTTTTCACTCCTTTGAAACCAAGTTGGAGCCGAAGAGTTCAGATCGCAATTGGCATTGCAAGAGGTCTTGTTTACTTGCATGAGGAATGTTGCACCCAAATCATCCATTGTGACATAAAGCCGCAAAACATACTTCTTGACGATGATTACAATGCTAGAATTTCTGATTTCGGGTTAGCAAAACTATTATTAATTAATCAAAGTCACACCAAAACCGGAATTAGAGGAACCAAAGGGTATGTTGCACCAGATTGGTTTAGGAGTGCACCGATCACGGCTAAAGTTGATGCTTACAGTTTTGGTGTGTTGTTACTAGAGATTATTTTCTGCAGGAAAAATGTTGAGGGTGATAATGTTAGTGAAGAAAAGAGGATTTTAACTGATTGGGCCTATGATTGCTACAAGGCTACAAAATTGGATCTTCTTCTAGAAAATGAAGGTGAGGCTATTGATGATATGAGTAGAGTGGAAAAATTTGTCATGATTGCTATTTGGTGCACTCAAGAAGATCCATCAATTAGGCCAACAATGAAAAGGGTTTTGCTAATGCTAGAAGAGATTGTTGAAGTTGCTATTCCTCCAAGTCCCTACCTTTATGGTTCTTTTGGGTGA 2070 0.3531 MGLMKDDGNFQLRDQNFVVLWQSFNHFTDTLLPGQVLNSKNCLYSRQGEFNFSRGMFELRLEKDGHGLLLNLINSPSNTYYSTQHDAYYESRIVYPYNEPLDVGDKLIFDKDYFSLYILIKENGKHIPITNSKNYVSNGNYYYKATINHDGVFTLSYYPRNPTNVQRWIVAKTIPENICLNSTSNNGICGLNSICSLRDDQRPKCTCQEGYSLIDSNNMYGGCIPNFQVNICQCRHQGSQNDTQIMRNLSNTYSPKFDYQPLSTCTLQECKEYCMQDGWCVLVFVNESSCWKNKLPLSHGRKDLSMKGTSIIKIRRNDTLSILSNVIKDNVHNNTKKMRDYGSLMIVMSIILGFSIVIIIALCGPICFWHNHKKIKSSATNISVVDRNLRIFTYKEITEATNNFREELGRGSCSIVYKGTIDVDMNVAVKKLDKLFQDSDKEFQTEMNVIIETHHRNLVRLHGYCSEEQHRVLVYELMSNGTLASFLFTPLKPSWSRRVQIAIGIARGLVYLHEECCTQIIHCDIKPQNILLDDDYNARISDFGLAKLLLINQSHTKTGIRGTKGYVAPDWFRSAPITAKVDAYSFGVLLLEIIFCRKNVEGDNVSEEKRILTDWAYDCYKATKLDLLLENEGEAIDDMSRVEKFVMIAIWCTQEDPSIRPTMKRVLLMLEEIVEVAIPPSPYLYGSFG* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3175 689 Gene3D - 27 186 - -
Tpr7g3175 689 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 2 687 - -
Tpr7g3175 689 Gene3D Transferase(Phosphotransferase) domain 1 478 678 - -
Tpr7g3175 689 Gene3D Phosphorylase Kinase; domain 1 366 477 - -
Tpr7g3175 689 ProSiteProfiles Protein kinase domain profile. 402 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3175 689 SUPERFAMILY Protein kinase-like (PK-like) 382 671 IPR011009 -
Tpr7g3175 689 Pfam Protein kinase domain 405 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3175 689 SMART serkin_6 402 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3175 689 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 687 - -
Tpr7g3175 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 520 532 IPR008271 GO:0004672|GO:0006468
Tpr7g3175 689 SUPERFAMILY alpha-D-mannose-specific plant lectins 3 44 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3175 Tpr-Chr7 39397036 39401989 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3175 388 671 Receptor kinase-like Gene Family AT1G60800 43.643 3.55e-71 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tpr7g3175 Pkinase 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3175 - - mtr:MTR_2g067980 876.7