Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3173 ATGGCGTCGAACAAGATCGAACGTGGTCACCAGATGTACCGTGACGGACTCTACAAAGAGGCGTTAGGGTTCTACACTGAAGCAATCGCTATGGCGAAGACCAATCCTCAGAAGATTGCTTTGCATAGTAATCGTGCTGCTTGTTTTCTTAAGCTTCATCATTTCAAGAAGGCAGCAGAAGAATGTACCTCGGTGCTTGAGCTTGATAGCAATCACAGCGGAGCATTGATGTTGCGGGCTCAAACACTGGTGACTTTGAAGGAGTATCATTCAGCACTTTTTGATGTCAACAGACTCTTGGAGTTGAATCCATCATCTGAGGTCTATCAAAATCTTCATGCTCGCCTGAAGACACAGTTGTCACTTGCTCCAATACCCGAGTCAGAAGAGGAGTTTGAGGAACAGGAAGATGAGAAAGCTGAGGTGATGCAAAAAAGAGAAGAAAAGAAGGAAGAAATGCGACAGGTACACGTGGCAGCTTCTACTGTTAGGACAGTTCAAAAGGGTGAGCTTGGTAAAGGTGTTACTAGCATTGAATGTGCTCCTAAAGAAACAGACCCCAAGTTTTCATCCAAACAGGGAAGAGATAAAAACTATGAGCCTAAAAAGTCAACGACAGAGCATATAGTTCCTAATGATCAAAACAGGGAATCAGCCGAGCAACAATCCAAAGGATGGCAAACAATTCCAAAACCAAAAGGGCATTCAGCCCTCGACTACGCACGATGGGACAGTGTTGACGATGATTCTAGTGAAGATGATAATGACGATGAAGACGATGAATCTTTTCCCCAATACCGTTTTCGTGTGAAAACCGTTGGTGTACGTCCTGTGAAGTGA 840 0.4429 MASNKIERGHQMYRDGLYKEALGFYTEAIAMAKTNPQKIALHSNRAACFLKLHHFKKAAEECTSVLELDSNHSGALMLRAQTLVTLKEYHSALFDVNRLLELNPSSEVYQNLHARLKTQLSLAPIPESEEEFEEQEDEKAEVMQKREEKKEEMRQVHVAASTVRTVQKGELGKGVTSIECAPKETDPKFSSKQGRDKNYEPKKSTTEHIVPNDQNRESAEQQSKGWQTIPKPKGHSALDYARWDSVDDDSSEDDNDDEDDESFPQYRFRVKTVGVRPVK* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3173 279 MobiDBLite consensus disorder prediction 126 153 - -
Tpr7g3173 279 MobiDBLite consensus disorder prediction 177 265 - -
Tpr7g3173 279 SMART tpr_5 73 106 IPR019734 GO:0005515
Tpr7g3173 279 SMART tpr_5 2 35 IPR019734 GO:0005515
Tpr7g3173 279 SMART tpr_5 39 72 IPR019734 GO:0005515
Tpr7g3173 279 MobiDBLite consensus disorder prediction 138 153 - -
Tpr7g3173 279 SUPERFAMILY TPR-like 6 119 IPR011990 GO:0005515
Tpr7g3173 279 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 2 279 - -
Tpr7g3173 279 MobiDBLite consensus disorder prediction 185 214 - -
Tpr7g3173 279 MobiDBLite consensus disorder prediction 246 261 - -
Tpr7g3173 279 MobiDBLite consensus disorder prediction 215 229 - -
Tpr7g3173 279 Coils Coil 125 155 - -
Tpr7g3173 279 Gene3D Tetratricopeptide repeat domain 1 156 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3173 2 120 Calmodulin-binding Proteins AT3G25230 33.588 5.56e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3173 - - gmx:100792046 404.06